RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 ATG2BQ96BY7 2078 aa17.69■□□□□ 0.42
PSEN1-218ENST00000556864 SEMA4FO95754 770 aa17.69■□□□□ 0.42
PSEN1-218ENST00000556864 CPP00450 1065 aa17.69■□□□□ 0.42
PSEN1-218ENST00000556864 ADRB3P13945 408 aa17.69■□□□□ 0.42
PSEN1-218ENST00000556864 TNNT3P45378 269 aaPredicted RBP17.69■□□□□ 0.42
PSEN1-218ENST00000556864 METAP1P53582 386 aa17.69■□□□□ 0.42
PSEN1-218ENST00000556864 ADPRHP54922 357 aa17.69■□□□□ 0.42
PSEN1-218ENST00000556864 SIX1Q15475 284 aaPredicted RBP17.69■□□□□ 0.42
PSEN1-218ENST00000556864 OASLQ15646 514 aaKnown RBP17.69■□□□□ 0.42
PSEN1-218ENST00000556864 AGBL4Q5VU57 503 aa17.69■□□□□ 0.42
PSEN1-218ENST00000556864 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.69■□□□□ 0.42
PSEN1-218ENST00000556864 PID1Q7Z2X4 250 aa17.69■□□□□ 0.42
PSEN1-218ENST00000556864 ZSCAN30Q86W11 494 aa17.69■□□□□ 0.42
PSEN1-218ENST00000556864 ZNF567Q8N184 647 aa17.69■□□□□ 0.42
PSEN1-218ENST00000556864 TOE1Q96GM8 510 aaKnown RBP17.69■□□□□ 0.42
PSEN1-218ENST00000556864 GBA3Q9H227 469 aa17.69■□□□□ 0.42
PSEN1-218ENST00000556864 KDM4CQ9H3R0 1056 aa17.69■□□□□ 0.42
PSEN1-218ENST00000556864 PREBQ9HCU5 417 aa17.69■□□□□ 0.42
PSEN1-218ENST00000556864 CD93Q9NPY3 652 aa17.69■□□□□ 0.42
PSEN1-218ENST00000556864 WSB2Q9NYS7 404 aaPredicted RBP17.69■□□□□ 0.42
PSEN1-218ENST00000556864 RNF14Q9UBS8 474 aa17.69■□□□□ 0.42
PSEN1-218ENST00000556864 SERGEFQ9UGK8 458 aa17.69■□□□□ 0.42
PSEN1-218ENST00000556864 RAB23Q9ULC3 237 aa17.69■□□□□ 0.42
PSEN1-218ENST00000556864 TPX2Q9ULW0 747 aaKnown RBP17.69■□□□□ 0.42
PSEN1-218ENST00000556864 ZNF148Q9UQR1 794 aa17.69■□□□□ 0.42
PSEN1-218ENST00000556864 SHROOM3Q8TF72 1996 aa17.69■□□□□ 0.42
PSEN1-218ENST00000556864 C16orf96A6NNT2 1141 aa17.68■□□□□ 0.42
PSEN1-218ENST00000556864 UPK3BL1B0FP48 263 aa17.68■□□□□ 0.42
PSEN1-218ENST00000556864 UPK3BL2E5RIL1 263 aa17.68■□□□□ 0.42
PSEN1-218ENST00000556864 PLRG1O43660 514 aaKnown RBP17.68■□□□□ 0.42
PSEN1-218ENST00000556864 RHOBTB1O94844 696 aa17.68■□□□□ 0.42
PSEN1-218ENST00000556864 ITGAVP06756 1048 aa17.68■□□□□ 0.42
PSEN1-218ENST00000556864 NFKB1P19838 968 aa17.68■□□□□ 0.42
PSEN1-218ENST00000556864 STIP1P31948 543 aaKnown RBP17.68■□□□□ 0.42
PSEN1-218ENST00000556864 ACTN2P35609 894 aa17.68■□□□□ 0.42
PSEN1-218ENST00000556864 CD86P42081 329 aa17.68■□□□□ 0.42
PSEN1-218ENST00000556864 PAFAH1B1P43034 410 aa17.68■□□□□ 0.42
PSEN1-218ENST00000556864 POLR2LP62875 67 aaKnown RBP17.68■□□□□ 0.42
PSEN1-218ENST00000556864 RPL6Q02878 288 aaKnown RBP17.68■□□□□ 0.42
PSEN1-218ENST00000556864 SNX1Q13596 522 aa17.68■□□□□ 0.42
PSEN1-218ENST00000556864 SIM2Q14190 667 aaPredicted RBP17.68■□□□□ 0.42
PSEN1-218ENST00000556864 PRPSAP1Q14558 356 aa17.68■□□□□ 0.42
PSEN1-218ENST00000556864 PIP5KL1Q5T9C9 394 aa17.68■□□□□ 0.42
PSEN1-218ENST00000556864 ARMC12Q5T9G4 340 aa17.68■□□□□ 0.42
PSEN1-218ENST00000556864 ERAP2Q6P179 960 aa17.68■□□□□ 0.42
PSEN1-218ENST00000556864 ARHGEF18Q6ZSZ5 1173 aa17.68■□□□□ 0.42
PSEN1-218ENST00000556864 LPCAT2Q7L5N7 544 aa17.68■□□□□ 0.42
PSEN1-218ENST00000556864 CAMK1DQ8IU85 385 aa17.68■□□□□ 0.42
PSEN1-218ENST00000556864 FAM71DQ8N9W8 422 aa17.68■□□□□ 0.42
PSEN1-218ENST00000556864 OR2T34Q8NGX1 318 aa17.68■□□□□ 0.42
PSEN1-218ENST00000556864 ARRDC2Q8TBH0 407 aa17.68■□□□□ 0.42
PSEN1-218ENST00000556864 SPOCK2Q92563 424 aa17.68■□□□□ 0.42
PSEN1-218ENST00000556864 LRRC45Q96CN5 670 aa17.68■□□□□ 0.42
PSEN1-218ENST00000556864 ECHDC3Q96DC8 303 aa17.68■□□□□ 0.42
PSEN1-218ENST00000556864 IMP4Q96G21 291 aaKnown RBP17.68■□□□□ 0.42
PSEN1-218ENST00000556864 MS4A14Q96JA4 679 aa17.68■□□□□ 0.42
PSEN1-218ENST00000556864 TMEM121Q9BTD3 319 aa17.68■□□□□ 0.42
PSEN1-218ENST00000556864 TDRD1Q9BXT4 1180 aaKnown RBP17.68■□□□□ 0.42
PSEN1-218ENST00000556864 NEUROG2Q9H2A3 272 aa17.68■□□□□ 0.42
PSEN1-218ENST00000556864 EPC1Q9H2F5 836 aa17.68■□□□□ 0.42
PSEN1-218ENST00000556864 SEMA4AQ9H3S1 761 aa17.68■□□□□ 0.42
PSEN1-218ENST00000556864 C10orf88Q9H8K7 445 aa17.68■□□□□ 0.42
PSEN1-218ENST00000556864 VPS45Q9NRW7 570 aa17.68■□□□□ 0.42
PSEN1-218ENST00000556864 INVSQ9Y283 1065 aa17.68■□□□□ 0.42
PSEN1-218ENST00000556864 R4GN57 208 aa17.68■□□□□ 0.42
PSEN1-218ENST00000556864 NUP205Q92621 2012 aa17.67■□□□□ 0.42
PSEN1-218ENST00000556864 C5orf60A6NFR6 353 aa17.67■□□□□ 0.42
PSEN1-218ENST00000556864 HTRA2O43464 458 aaPredicted RBP17.67■□□□□ 0.42
PSEN1-218ENST00000556864 HRO43593 1189 aa17.67■□□□□ 0.42
PSEN1-218ENST00000556864 AP1G1O43747 822 aa17.67■□□□□ 0.42
PSEN1-218ENST00000556864 GJB3O75712 270 aa17.67■□□□□ 0.42
PSEN1-218ENST00000556864 BCKDHBP21953 392 aa17.67■□□□□ 0.42
PSEN1-218ENST00000556864 RPL26P61254 145 aaKnown RBP17.67■□□□□ 0.42
PSEN1-218ENST00000556864 LMNB2Q03252 620 aa17.67■□□□□ 0.42
PSEN1-218ENST00000556864 NIPAL4Q0D2K0 466 aa17.67■□□□□ 0.42
PSEN1-218ENST00000556864 ELP6Q0PNE2 266 aa17.67■□□□□ 0.42
PSEN1-218ENST00000556864 TRAF2Q12933 501 aa17.67■□□□□ 0.42
PSEN1-218ENST00000556864 SRSF5Q13243 272 aaKnown RBP17.67■□□□□ 0.42
PSEN1-218ENST00000556864 P3H1Q32P28 736 aa17.67■□□□□ 0.42
PSEN1-218ENST00000556864 SPDYCQ5MJ68 293 aa17.67■□□□□ 0.42
PSEN1-218ENST00000556864 ANKRD20A2Q5SQ80 823 aa17.67■□□□□ 0.42
PSEN1-218ENST00000556864 ANKRD20A1Q5TYW2 823 aa17.67■□□□□ 0.42
PSEN1-218ENST00000556864 ANKRD20A3Q5VUR7 823 aa17.67■□□□□ 0.42
PSEN1-218ENST00000556864 PRR23BQ6ZRT6 265 aa17.67■□□□□ 0.42
PSEN1-218ENST00000556864 NDUFAF2Q8N183 169 aa17.67■□□□□ 0.42
PSEN1-218ENST00000556864 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.67■□□□□ 0.42
PSEN1-218ENST00000556864 FAM160A2Q8N612 972 aaPredicted RBP17.67■□□□□ 0.42
PSEN1-218ENST00000556864 PRELID2Q8N945 189 aa17.67■□□□□ 0.42
PSEN1-218ENST00000556864 CCDC89Q8N998 374 aa17.67■□□□□ 0.42
PSEN1-218ENST00000556864 C12orf50Q8NA57 414 aaPredicted RBP17.67■□□□□ 0.42
PSEN1-218ENST00000556864 OR14C36Q8NHC7 312 aa17.67■□□□□ 0.42
PSEN1-218ENST00000556864 PDCD6IPQ8WUM4 868 aaKnown RBP17.67■□□□□ 0.42
PSEN1-218ENST00000556864 FOXJ1Q92949 421 aa17.67■□□□□ 0.42
PSEN1-218ENST00000556864 RTP4Q96DX8 246 aa17.67■□□□□ 0.42
PSEN1-218ENST00000556864 CAPZA3Q96KX2 299 aa17.67■□□□□ 0.42
PSEN1-218ENST00000556864 FCRL5Q96RD9 977 aa17.67■□□□□ 0.42
PSEN1-218ENST00000556864 GPR174Q9BXC1 333 aa17.67■□□□□ 0.42
PSEN1-218ENST00000556864 MBD1Q9UIS9 605 aaPredicted RBP17.67■□□□□ 0.42
PSEN1-218ENST00000556864 RPL26L1Q9UNX3 145 aaKnown RBP17.67■□□□□ 0.42
PSEN1-218ENST00000556864 RAI2Q9Y5P3 530 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms