RNA–Protein interactions for RNA: ENST00000556523.1

SDR39U1-219, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 735 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-219ENST00000556523 FAXCQ5TGI0 409 aa17.87■□□□□ 0.45
SDR39U1-219ENST00000556523 IGF2-ASQ6U949 168 aa17.87■□□□□ 0.45
SDR39U1-219ENST00000556523 MACC1Q6ZN28 852 aa17.87■□□□□ 0.45
SDR39U1-219ENST00000556523 RBM43Q6ZSC3 357 aaKnown RBP17.87■□□□□ 0.45
SDR39U1-219ENST00000556523 ZNF843Q8N446 348 aa17.87■□□□□ 0.45
SDR39U1-219ENST00000556523 JOSD2Q8TAC2 188 aa17.87■□□□□ 0.45
SDR39U1-219ENST00000556523 WDR48Q8TAF3 677 aa17.87■□□□□ 0.45
SDR39U1-219ENST00000556523 FAM172AQ8WUF8 416 aa17.87■□□□□ 0.45
SDR39U1-219ENST00000556523 CASKIN2Q8WXE0 1202 aa17.87■□□□□ 0.45
SDR39U1-219ENST00000556523 CCDC97Q96F63 343 aaPredicted RBP17.87■□□□□ 0.45
SDR39U1-219ENST00000556523 ATXN7L3BQ96GX2 97 aa17.87■□□□□ 0.45
SDR39U1-219ENST00000556523 TBATAQ96M53 351 aa17.87■□□□□ 0.45
SDR39U1-219ENST00000556523 NCAPGQ9BPX3 1015 aa17.87■□□□□ 0.45
SDR39U1-219ENST00000556523 RAB6CQ9H0N0 254 aa17.87■□□□□ 0.45
SDR39U1-219ENST00000556523 CPNE5Q9HCH3 593 aa17.87■□□□□ 0.45
SDR39U1-219ENST00000556523 LMO7DNF2Z398 122 aa17.86■□□□□ 0.45
SDR39U1-219ENST00000556523 FAM72CH0Y354 149 aa17.86■□□□□ 0.45
SDR39U1-219ENST00000556523 TOR1BO14657 336 aa17.86■□□□□ 0.45
SDR39U1-219ENST00000556523 AREL1O15033 823 aa17.86■□□□□ 0.45
SDR39U1-219ENST00000556523 KDELR3O43731 214 aa17.86■□□□□ 0.45
SDR39U1-219ENST00000556523 NSFP46459 744 aaKnown RBP17.86■□□□□ 0.45
SDR39U1-219ENST00000556523 ADKP55263 362 aaKnown RBP17.86■□□□□ 0.45
SDR39U1-219ENST00000556523 FMO1Q01740 532 aa17.86■□□□□ 0.45
SDR39U1-219ENST00000556523 PPARDQ03181 441 aa17.86■□□□□ 0.45
SDR39U1-219ENST00000556523 KLHL40Q2TBA0 621 aa17.86■□□□□ 0.45
SDR39U1-219ENST00000556523 EFHC2Q5JST6 749 aa17.86■□□□□ 0.45
SDR39U1-219ENST00000556523 C6orf132Q5T0Z8 1188 aa17.86■□□□□ 0.45
SDR39U1-219ENST00000556523 CCDC183Q5T5S1 534 aa17.86■□□□□ 0.45
SDR39U1-219ENST00000556523 FAM72AQ5TYM5 149 aa17.86■□□□□ 0.45
SDR39U1-219ENST00000556523 FAM72DQ6L9T8 149 aa17.86■□□□□ 0.45
SDR39U1-219ENST00000556523 ESRP1Q6NXG1 681 aaKnown RBP17.86■□□□□ 0.45
SDR39U1-219ENST00000556523 FOXR1Q6PIV2 292 aa17.86■□□□□ 0.45
SDR39U1-219ENST00000556523 FAM72BQ86X60 149 aa17.86■□□□□ 0.45
SDR39U1-219ENST00000556523 SLC35F3Q8IY50 421 aa17.86■□□□□ 0.45
SDR39U1-219ENST00000556523 CCDC185Q8N715 623 aa17.86■□□□□ 0.45
SDR39U1-219ENST00000556523 SLC30A5Q8TAD4 765 aa17.86■□□□□ 0.45
SDR39U1-219ENST00000556523 NTAN1Q96AB6 310 aa17.86■□□□□ 0.45
SDR39U1-219ENST00000556523 EPAS1Q99814 870 aa17.86■□□□□ 0.45
SDR39U1-219ENST00000556523 LRRC61Q9BV99 259 aa17.86■□□□□ 0.45
SDR39U1-219ENST00000556523 SELENOOQ9BVL4 669 aa17.86■□□□□ 0.45
SDR39U1-219ENST00000556523 BOCQ9BWV1 1114 aa17.86■□□□□ 0.45
SDR39U1-219ENST00000556523 GANQ9H2C0 597 aa17.86■□□□□ 0.45
SDR39U1-219ENST00000556523 TCEAL2Q9H3H9 227 aaPredicted RBP17.86■□□□□ 0.45
SDR39U1-219ENST00000556523 SAMSN1Q9NSI8 373 aaKnown RBP17.86■□□□□ 0.45
SDR39U1-219ENST00000556523 NEU3Q9UQ49 428 aa17.86■□□□□ 0.45
SDR39U1-219ENST00000556523 ENTPD2Q9Y5L3 495 aa17.86■□□□□ 0.45
SDR39U1-219ENST00000556523 RP1P56715 2156 aa17.86■□□□□ 0.45
SDR39U1-219ENST00000556523 MMP20O60882 483 aa17.85■□□□□ 0.45
SDR39U1-219ENST00000556523 ZIC2O95409 532 aaPredicted RBP17.85■□□□□ 0.45
SDR39U1-219ENST00000556523 GJB6O95452 261 aa17.85■□□□□ 0.45
SDR39U1-219ENST00000556523 KRT3P12035 628 aa17.85■□□□□ 0.45
SDR39U1-219ENST00000556523 PLA2G2AP14555 144 aa17.85■□□□□ 0.45
SDR39U1-219ENST00000556523 EPHB2P29323 1055 aa17.85■□□□□ 0.45
SDR39U1-219ENST00000556523 SOX5P35711 763 aa17.85■□□□□ 0.45
SDR39U1-219ENST00000556523 HDAC4P56524 1084 aa17.85■□□□□ 0.45
SDR39U1-219ENST00000556523 POLR2FP61218 127 aaKnown RBP17.85■□□□□ 0.45
SDR39U1-219ENST00000556523 SPIDRQ14159 915 aa17.85■□□□□ 0.45
SDR39U1-219ENST00000556523 SKOR2Q2VWA4 1001 aaPredicted RBP17.85■□□□□ 0.45
SDR39U1-219ENST00000556523 PERM1Q5SV97 790 aa17.85■□□□□ 0.45
SDR39U1-219ENST00000556523 FKBP15Q5T1M5 1219 aa17.85■□□□□ 0.45
SDR39U1-219ENST00000556523 ARL14Q8N4G2 192 aa17.85■□□□□ 0.45
SDR39U1-219ENST00000556523 RTL3Q8N8U3 475 aaKnown RBP17.85■□□□□ 0.45
SDR39U1-219ENST00000556523 CENPTQ96BT3 561 aa17.85■□□□□ 0.45
SDR39U1-219ENST00000556523 WRAP53Q9BUR4 548 aaKnown RBP17.85■□□□□ 0.45
SDR39U1-219ENST00000556523 TTYH3Q9C0H2 523 aa17.85■□□□□ 0.45
SDR39U1-219ENST00000556523 FAM207AQ9NSI2 230 aaPredicted RBP17.85■□□□□ 0.45
SDR39U1-219ENST00000556523 PCDHGA8Q9Y5G5 932 aa17.85■□□□□ 0.45
SDR39U1-219ENST00000556523 ANKRD62A6NC57 917 aa17.84■□□□□ 0.45
SDR39U1-219ENST00000556523 GCATO75600 419 aa17.84■□□□□ 0.45
SDR39U1-219ENST00000556523 CALB1P05937 261 aa17.84■□□□□ 0.45
SDR39U1-219ENST00000556523 GPD1P21695 349 aa17.84■□□□□ 0.45
SDR39U1-219ENST00000556523 EIF4A3P38919 411 aaKnown RBP17.84■□□□□ 0.45
SDR39U1-219ENST00000556523 BLKP51451 505 aa17.84■□□□□ 0.45
SDR39U1-219ENST00000556523 VAC14Q08AM6 782 aa17.84■□□□□ 0.45
SDR39U1-219ENST00000556523 ELP6Q0PNE2 266 aa17.84■□□□□ 0.45
SDR39U1-219ENST00000556523 IRF4Q15306 451 aa17.84■□□□□ 0.45
SDR39U1-219ENST00000556523 SYCP1Q15431 976 aa17.84■□□□□ 0.45
SDR39U1-219ENST00000556523 CFAP58Q5T655 872 aa17.84■□□□□ 0.45
SDR39U1-219ENST00000556523 SLFN11Q7Z7L1 901 aa17.84■□□□□ 0.45
SDR39U1-219ENST00000556523 FSTL5Q8N475 847 aaPredicted RBP17.84■□□□□ 0.45
SDR39U1-219ENST00000556523 WDR36Q8NI36 951 aaKnown RBP17.84■□□□□ 0.45
SDR39U1-219ENST00000556523 SCG3Q8WXD2 468 aaKnown RBP17.84■□□□□ 0.45
SDR39U1-219ENST00000556523 WBP1Q96G27 269 aa17.84■□□□□ 0.45
SDR39U1-219ENST00000556523 VPS16Q9H269 839 aa17.84■□□□□ 0.45
SDR39U1-219ENST00000556523 NLRC4Q9NPP4 1024 aa17.84■□□□□ 0.45
SDR39U1-219ENST00000556523 ADAM22Q9P0K1 906 aa17.84■□□□□ 0.45
SDR39U1-219ENST00000556523 DKK3Q9UBP4 350 aa17.84■□□□□ 0.45
SDR39U1-219ENST00000556523 PADI4Q9UM07 663 aa17.84■□□□□ 0.45
SDR39U1-219ENST00000556523 DAAM1Q9Y4D1 1078 aa17.84■□□□□ 0.45
SDR39U1-219ENST00000556523 COL27A1Q8IZC6 1860 aaPredicted RBP17.84■□□□□ 0.45
SDR39U1-219ENST00000556523 CCDC187A0A096LP49 1063 aa17.83■□□□□ 0.44
SDR39U1-219ENST00000556523 ALPIP09923 528 aa17.83■□□□□ 0.44
SDR39U1-219ENST00000556523 CTSEP14091 401 aa17.83■□□□□ 0.44
SDR39U1-219ENST00000556523 TSHRP16473 764 aa17.83■□□□□ 0.44
SDR39U1-219ENST00000556523 DESP17661 470 aa17.83■□□□□ 0.44
SDR39U1-219ENST00000556523 CHRNB2P17787 502 aa17.83■□□□□ 0.44
SDR39U1-219ENST00000556523 HTR1BP28222 390 aa17.83■□□□□ 0.44
SDR39U1-219ENST00000556523 STAT1P42224 750 aa17.83■□□□□ 0.44
SDR39U1-219ENST00000556523 MLLT3P42568 568 aaPredicted RBP17.83■□□□□ 0.44
SDR39U1-219ENST00000556523 SUOXP51687 545 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms