RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 STAMBPL1Q96FJ0 436 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 ANKRD36BP1Q96IX9 119 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 FAM167AQ96KS9 214 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 MCEEQ96PE7 176 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 PI4K2AQ9BTU6 479 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 FRMD8Q9BZ67 464 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-241ENST00000556374 DNAI2Q9GZS0 605 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 C2orf40Q9H1Z8 148 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 VCXQ9H320 206 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 EBF2Q9HAK2 575 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 ZNF302Q9NR11 478 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 KLHL11Q9NVR0 708 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 COL20A1Q9P218 1284 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 WDR35Q9P2L0 1181 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 C11orf21Q9P2W6 132 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 SAE1Q9UBE0 346 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-241ENST00000556374 FETUBQ9UGM5 382 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 ING1Q9UK53 422 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-241ENST00000556374 CDC42EP3Q9UKI2 254 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 PHTF1Q9UMS5 762 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 GABRQQ9UN88 632 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 RPL26L1Q9UNX3 145 aaKnown RBP4.54□□□□□ -1.68
ATXN3-241ENST00000556374 NAALADL1Q9UQQ1 740 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 R3HDM2Q9Y2K5 976 aaKnown RBP4.54□□□□□ -1.68
ATXN3-241ENST00000556374 NEU2Q9Y3R4 380 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 ZNF318Q5VUA4 2279 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 PLXNA1Q9UIW2 1896 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 CLUHO75153 1309 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 hCG_1818297A0A087WSY0 165 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 LOC102724159A0A0B4J2E5 919 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 TMEM150BA6NC51 233 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 PI4K2BG5E9Z4 385 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 GOLGA8SH3BPF8 625 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 PLD2O14939 933 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 LPXNO60711 386 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 EDF1O60869 148 aaKnown RBP4.53□□□□□ -1.68
ATXN3-241ENST00000556374 DIAPH2O60879 1101 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 SPAG7O75391 227 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 NEBLO76041 1014 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 CCNE2O96020 404 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 GH1P01241 217 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 PIGRP01833 764 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 MT-ND3P03897 115 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 INHBAP08476 426 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 KRT16P08779 473 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 CCNB1P14635 433 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 CD19P15391 556 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 PECAM1P16284 738 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-241ENST00000556374 TAC1P20366 129 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 MMP8P22894 467 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 ADSSP30520 456 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 ACOT2P49753 483 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 FLT3LGP49771 235 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 EFNA5P52803 228 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 ACTR2P61160 394 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 DYNLT1P63172 113 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 IRX1P78414 480 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-241ENST00000556374 BASP1P80723 227 aaKnown RBP4.53□□□□□ -1.68
ATXN3-241ENST00000556374 MRPS35P82673 323 aaKnown RBP4.53□□□□□ -1.68
ATXN3-241ENST00000556374 MRPS5P82675 430 aaKnown RBP4.53□□□□□ -1.68
ATXN3-241ENST00000556374 MRPS9P82933 396 aaKnown RBP4.53□□□□□ -1.68
ATXN3-241ENST00000556374 IRF9Q00978 393 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 ROR1Q01973 937 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 ROM1Q03395 351 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 ADCY1Q08828 1119 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 KLF1Q13351 362 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-241ENST00000556374 SNAPC2Q13487 334 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 MAMLD1Q13495 774 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 RIN1Q13671 783 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 TFDP1Q14186 410 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 TFDP2Q14188 446 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 PWP2Q15269 919 aaKnown RBP4.53□□□□□ -1.68
ATXN3-241ENST00000556374 RASA2Q15283 850 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 DGKDQ16760 1214 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 GALNTL6Q49A17 601 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 WASHC2DQ5SRD0 308 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 CATSPEREQ5SY80 951 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 RNASEH2BQ5TBB1 312 aaKnown RBP4.53□□□□□ -1.68
ATXN3-241ENST00000556374 ANKRD20A3Q5VUR7 823 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 LMBRD2Q68DH5 695 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-241ENST00000556374 PLEKHA7Q6IQ23 1121 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 SWSAP1Q6NVH7 229 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 RGS9BPQ6ZS82 235 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 HTR3DQ70Z44 454 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 ANO5Q75V66 913 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 BMP8AQ7Z5Y6 402 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 PHLDB2Q86SQ0 1253 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 DDX53Q86TM3 631 aaKnown RBP4.53□□□□□ -1.68
ATXN3-241ENST00000556374 ERICH1Q86X53 443 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 ECHDC2Q86YB7 292 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 RHPN2Q8IUC4 686 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 BRSK2Q8IWQ3 736 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 THNSL1Q8IYQ7 743 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 PDIK1LQ8N165 341 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 C4orf33Q8N1A6 199 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 VPS52Q8N1B4 723 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 KIF2BQ8N4N8 673 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 NIPA2Q8N8Q9 360 aa4.53□□□□□ -1.68
ATXN3-241ENST00000556374 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.53□□□□□ -1.68
ATXN3-241ENST00000556374 CFAP61Q8NHU2 1237 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms