RNA–Protein interactions for RNA: ENST00000556237.1

HIF1A-208, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-208ENST00000556237 CPQQ9Y646 472 aa6.49□□□□□ -1.37
HIF1A-208ENST00000556237 PCNTO95613 3336 aa6.49□□□□□ -1.37
HIF1A-208ENST00000556237 GREB1Q4ZG55 1949 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 CENPFP49454 3210 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 ZNF638Q14966 1978 aaKnown RBP6.48□□□□□ -1.37
HIF1A-208ENST00000556237 PLXNA4Q9HCM2 1894 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 TRAV19A0A0A6YYK7 116 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 C5orf60A6NFR6 353 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 DFFAO00273 331 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 ZNF197O14709 1029 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 TRDMT1O14717 391 aaKnown RBP6.48□□□□□ -1.37
HIF1A-208ENST00000556237 NDC80O14777 642 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 TSPAN3O60637 253 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 GCATO75600 419 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 CNTN5O94779 1100 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 STK10O94804 968 aaKnown RBP6.48□□□□□ -1.37
HIF1A-208ENST00000556237 CKMP06732 381 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 RHOP08100 348 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 VAV1P15498 845 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 PFKLP17858 780 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 ECHS1P30084 290 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 HOXA9P31269 272 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 HOXC13P31276 330 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 SLC6A4P31645 630 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 NRIP1P48552 1158 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 PAPOLAP51003 745 aaKnown RBP6.48□□□□□ -1.37
HIF1A-208ENST00000556237 NTHL1P78549 312 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 SLC7A9P82251 487 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 GALNT2Q10471 571 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 SLBPQ14493 270 aaKnown RBP eCLIP6.48□□□□□ -1.37
HIF1A-208ENST00000556237 CASP8Q14790 479 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 TEAD2Q15562 447 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 DUSP6Q16828 381 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 ARHGAP15Q53QZ3 475 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 ALFQ53S48 1182 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 ANKRD20A2Q5SQ80 823 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 SNAP47Q5SQN1 464 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 ADGRF1Q5T601 910 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 ANKRD20A1Q5TYW2 823 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 ANKRD20A3Q5VUR7 823 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 HIBCHQ6NVY1 386 aaPredicted RBP6.48□□□□□ -1.37
HIF1A-208ENST00000556237 RFWD3Q6PCD5 774 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 C4orf22Q6V702 233 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 GRASPQ7Z6J2 395 aaPredicted RBP6.48□□□□□ -1.37
HIF1A-208ENST00000556237 CCDC25Q86WR0 208 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 CCDC13Q8IYE1 715 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 ZNF683Q8IZ20 524 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 CFAP52Q8N1V2 620 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 NPWQ8N729 165 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 C12orf76Q8N812 135 aaPredicted RBP6.48□□□□□ -1.37
HIF1A-208ENST00000556237 RTL3Q8N8U3 475 aaKnown RBP6.48□□□□□ -1.37
HIF1A-208ENST00000556237 CCDC110Q8TBZ0 833 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 GDPD5Q8WTR4 605 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 HTR3CQ8WXA8 447 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 TIFAQ96CG3 184 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 TCEAL4Q96EI5 215 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 P2RY11Q96G91 374 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 OLFM3Q96PB7 478 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 QKIQ96PU8 341 aaKnown RBP eCLIP6.48□□□□□ -1.37
HIF1A-208ENST00000556237 FUT8Q9BYC5 575 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 FAM129AQ9BZQ8 928 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 KLC2Q9H0B6 622 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 TSPYL1Q9H0U9 437 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 ADAM7Q9H2U9 754 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 TASP1Q9H6P5 420 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 SSU72Q9NP77 194 aaKnown RBP6.48□□□□□ -1.37
HIF1A-208ENST00000556237 TMEM248Q9NWD8 314 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 ZNF446Q9NWS9 450 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 ZDHHC7Q9NXF8 308 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 LSM7Q9UK45 103 aaKnown RBP6.48□□□□□ -1.37
HIF1A-208ENST00000556237 AGO1Q9UL18 857 aaKnown RBP6.48□□□□□ -1.37
HIF1A-208ENST00000556237 POLR3KQ9Y2Y1 108 aaPredicted RBP6.48□□□□□ -1.37
HIF1A-208ENST00000556237 SH3BP1Q9Y3L3 701 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 PCDHGB7Q9Y5F8 929 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 HCFC2Q9Y5Z7 792 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 PATJQ8NI35 1801 aa6.48□□□□□ -1.37
HIF1A-208ENST00000556237 PLXNA3P51805 1871 aa6.47□□□□□ -1.37
HIF1A-208ENST00000556237 IGLV3-10A0A075B6K4 115 aa6.47□□□□□ -1.37
HIF1A-208ENST00000556237 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.47□□□□□ -1.37
HIF1A-208ENST00000556237 ZNF503-AS2A6NEH8 195 aa6.47□□□□□ -1.37
HIF1A-208ENST00000556237 EPOPA6NHQ4 379 aa6.47□□□□□ -1.37
HIF1A-208ENST00000556237 ARHGAP42A6NI28 874 aa6.47□□□□□ -1.37
HIF1A-208ENST00000556237 RASA4BC9J798 803 aa6.47□□□□□ -1.37
HIF1A-208ENST00000556237 KCNK1O00180 336 aa6.47□□□□□ -1.37
HIF1A-208ENST00000556237 MTSS1O43312 755 aa6.47□□□□□ -1.37
HIF1A-208ENST00000556237 RASA4O43374 803 aa6.47□□□□□ -1.37
HIF1A-208ENST00000556237 MOSPD3O75425 235 aa6.47□□□□□ -1.37
HIF1A-208ENST00000556237 ZNF189O75820 626 aaPredicted RBP6.47□□□□□ -1.37
HIF1A-208ENST00000556237 METTL18O95568 372 aa6.47□□□□□ -1.37
HIF1A-208ENST00000556237 OLFM2O95897 454 aa6.47□□□□□ -1.37
HIF1A-208ENST00000556237 JCHAINP01591 159 aa6.47□□□□□ -1.37
HIF1A-208ENST00000556237 CCNCP24863 283 aa6.47□□□□□ -1.37
HIF1A-208ENST00000556237 DDX6P26196 483 aaKnown RBP eCLIP6.47□□□□□ -1.37
HIF1A-208ENST00000556237 OR1E1P30953 314 aa6.47□□□□□ -1.37
HIF1A-208ENST00000556237 CHKAP35790 457 aa6.47□□□□□ -1.37
HIF1A-208ENST00000556237 FDFT1P37268 417 aa6.47□□□□□ -1.37
HIF1A-208ENST00000556237 GARSP41250 739 aaKnown RBP6.47□□□□□ -1.37
HIF1A-208ENST00000556237 CCR2P41597 374 aa6.47□□□□□ -1.37
HIF1A-208ENST00000556237 LMAN1P49257 510 aa6.47□□□□□ -1.37
HIF1A-208ENST00000556237 NDST2P52849 883 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms