RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 RFWD3Q6PCD5 774 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 CRTC1Q6UUV9 634 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 DSG4Q86SJ6 1040 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 JAMLQ86YT9 394 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 MFN1Q8IWA4 741 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 CCDC65Q8IXS2 484 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 WDR48Q8TAF3 677 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 PLEKHO2Q8TD55 490 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 HTR3CQ8WXA8 447 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 FUCA2Q9BTY2 467 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 NT5C1AQ9BXI3 368 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 CALN1Q9BXU9 219 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 OLA1Q9NTK5 396 aaKnown RBP7.05□□□□□ -1.28
ATXN3-236ENST00000556220 SEPT10Q9P0V9 454 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 FAM8A1Q9UBU6 413 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 SFMBT1Q9UHJ3 866 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 CSNK1G3Q9Y6M4 447 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 FBN2P35556 2912 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 UBE4BO95155 1302 aa7.04□□□□□ -1.28
ATXN3-236ENST00000556220 TDRD6O60522 2096 aaKnown RBP7.04□□□□□ -1.28
ATXN3-236ENST00000556220 DBX1A6NMT0 343 aa7.04□□□□□ -1.28
ATXN3-236ENST00000556220 NTN3O00634 580 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-236ENST00000556220 CASC3O15234 703 aaKnown RBP7.04□□□□□ -1.28
ATXN3-236ENST00000556220 EIF3DO15371 548 aaKnown RBP eCLIP7.04□□□□□ -1.28
ATXN3-236ENST00000556220 IRAK2O43187 625 aa7.04□□□□□ -1.28
ATXN3-236ENST00000556220 FBXO24O75426 580 aa7.04□□□□□ -1.28
ATXN3-236ENST00000556220 ZBED1O96006 694 aa7.04□□□□□ -1.28
ATXN3-236ENST00000556220 CSF2P04141 144 aa7.04□□□□□ -1.28
ATXN3-236ENST00000556220 RPN1P04843 607 aaKnown RBP7.04□□□□□ -1.28
ATXN3-236ENST00000556220 WT1P19544 449 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-236ENST00000556220 AKT2P31751 481 aa7.04□□□□□ -1.28
ATXN3-236ENST00000556220 ECT2LQ008S8 904 aa7.04□□□□□ -1.28
ATXN3-236ENST00000556220 INCA1Q0VD86 236 aa7.04□□□□□ -1.28
ATXN3-236ENST00000556220 NR0B2Q15466 257 aa7.04□□□□□ -1.28
ATXN3-236ENST00000556220 FAM133BQ5BKY9 247 aaKnown RBP7.04□□□□□ -1.28
ATXN3-236ENST00000556220 FSCBQ5H9T9 825 aa7.04□□□□□ -1.28
ATXN3-236ENST00000556220 AGBL4Q5VU57 503 aa7.04□□□□□ -1.28
ATXN3-236ENST00000556220 PM20D1Q6GTS8 502 aa7.04□□□□□ -1.28
ATXN3-236ENST00000556220 Q6ZSR6 202 aa7.04□□□□□ -1.28
ATXN3-236ENST00000556220 RAB11FIP2Q7L804 512 aa7.04□□□□□ -1.28
ATXN3-236ENST00000556220 UBE3DQ7Z6J8 389 aa7.04□□□□□ -1.28
ATXN3-236ENST00000556220 VASH2Q86V25 355 aa7.04□□□□□ -1.28
ATXN3-236ENST00000556220 DCP2Q8IU60 420 aaKnown RBP7.04□□□□□ -1.28
ATXN3-236ENST00000556220 SLC22A18ASQ8N1D0 253 aa7.04□□□□□ -1.28
ATXN3-236ENST00000556220 ZNF548Q8NEK5 533 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-236ENST00000556220 SPATA20Q8TB22 786 aa7.04□□□□□ -1.28
ATXN3-236ENST00000556220 NDRG1Q92597 394 aaKnown RBP7.04□□□□□ -1.28
ATXN3-236ENST00000556220 TAF4BQ92750 862 aa7.04□□□□□ -1.28
ATXN3-236ENST00000556220 KLK6Q92876 244 aa7.04□□□□□ -1.28
ATXN3-236ENST00000556220 SNX21Q969T3 373 aa7.04□□□□□ -1.28
ATXN3-236ENST00000556220 RPL10LQ96L21 214 aaKnown RBP7.04□□□□□ -1.28
ATXN3-236ENST00000556220 NOX5Q96PH1 765 aa7.04□□□□□ -1.28
ATXN3-236ENST00000556220 SPAG5Q96R06 1193 aa7.04□□□□□ -1.28
ATXN3-236ENST00000556220 PREBQ9HCU5 417 aa7.04□□□□□ -1.28
ATXN3-236ENST00000556220 DNAJC28Q9NX36 388 aa7.04□□□□□ -1.28
ATXN3-236ENST00000556220 FAM53CQ9NYF3 392 aa7.04□□□□□ -1.28
ATXN3-236ENST00000556220 TUBD1Q9UJT1 453 aa7.04□□□□□ -1.28
ATXN3-236ENST00000556220 SARDHQ9UL12 918 aa7.04□□□□□ -1.28
ATXN3-236ENST00000556220 PLAAQ9Y263 795 aa7.04□□□□□ -1.28
ATXN3-236ENST00000556220 ZDHHC9Q9Y397 364 aa7.04□□□□□ -1.28
ATXN3-236ENST00000556220 A0A1W2PQU0 124 aa7.03□□□□□ -1.28
ATXN3-236ENST00000556220 LRRIQ3A6PVS8 624 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-236ENST00000556220 H3BQV1 296 aa7.03□□□□□ -1.28
ATXN3-236ENST00000556220 TMX2-CTNND1H3BSU7 103 aa7.03□□□□□ -1.28
ATXN3-236ENST00000556220 TPP1O14773 563 aa7.03□□□□□ -1.28
ATXN3-236ENST00000556220 MUSKO15146 869 aa7.03□□□□□ -1.28
ATXN3-236ENST00000556220 MOCS3O95396 460 aa7.03□□□□□ -1.28
ATXN3-236ENST00000556220 ASS1P00966 412 aaKnown RBP7.03□□□□□ -1.28
ATXN3-236ENST00000556220 HGFP14210 728 aa7.03□□□□□ -1.28
ATXN3-236ENST00000556220 PRLRP16471 622 aa7.03□□□□□ -1.28
ATXN3-236ENST00000556220 POU3F2P20265 443 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-236ENST00000556220 HNRNPA2B1P22626 353 aaKnown RBP7.03□□□□□ -1.28
ATXN3-236ENST00000556220 SLC6A4P31645 630 aa7.03□□□□□ -1.28
ATXN3-236ENST00000556220 NNMTP40261 264 aa7.03□□□□□ -1.28
ATXN3-236ENST00000556220 SLC11A2P49281 568 aa7.03□□□□□ -1.28
ATXN3-236ENST00000556220 POLE2P56282 527 aa7.03□□□□□ -1.28
ATXN3-236ENST00000556220 CLDN2P57739 230 aa7.03□□□□□ -1.28
ATXN3-236ENST00000556220 TAS2R38P59533 333 aa7.03□□□□□ -1.28
ATXN3-236ENST00000556220 CNTN1Q12860 1018 aa7.03□□□□□ -1.28
ATXN3-236ENST00000556220 KCNAB2Q13303 367 aa7.03□□□□□ -1.28
ATXN3-236ENST00000556220 PKP1Q13835 747 aa7.03□□□□□ -1.28
ATXN3-236ENST00000556220 SPIDRQ14159 915 aa7.03□□□□□ -1.28
ATXN3-236ENST00000556220 DRAP1Q14919 205 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-236ENST00000556220 ZNF284Q2VY69 593 aa7.03□□□□□ -1.28
ATXN3-236ENST00000556220 DEFB133Q30KQ1 61 aa7.03□□□□□ -1.28
ATXN3-236ENST00000556220 PITRM1Q5JRX3 1037 aa7.03□□□□□ -1.28
ATXN3-236ENST00000556220 LCE1DQ5T752 114 aa7.03□□□□□ -1.28
ATXN3-236ENST00000556220 RNF219Q5W0B1 726 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-236ENST00000556220 BSPRYQ5W0U4 402 aa7.03□□□□□ -1.28
ATXN3-236ENST00000556220 SPOPLQ6IQ16 392 aa7.03□□□□□ -1.28
ATXN3-236ENST00000556220 NEK5Q6P3R8 708 aa7.03□□□□□ -1.28
ATXN3-236ENST00000556220 BORAQ6PGQ7 559 aa7.03□□□□□ -1.28
ATXN3-236ENST00000556220 CCDC73Q6ZRK6 1079 aa7.03□□□□□ -1.28
ATXN3-236ENST00000556220 MMS22LQ6ZRQ5 1243 aa7.03□□□□□ -1.28
ATXN3-236ENST00000556220 EPM2AIP1Q7L775 607 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-236ENST00000556220 BHLHA9Q7RTU4 235 aa7.03□□□□□ -1.28
ATXN3-236ENST00000556220 ABI3BPQ7Z7G0 1075 aa7.03□□□□□ -1.28
ATXN3-236ENST00000556220 B3GNT8Q7Z7M8 397 aa7.03□□□□□ -1.28
ATXN3-236ENST00000556220 PIGZQ86VD9 579 aa7.03□□□□□ -1.28
ATXN3-236ENST00000556220 CCDC117Q8IWD4 279 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms