RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 RAB25P57735 213 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 ZNF844Q08AG5 666 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 ATP13A5Q4VNC0 1218 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 ATP13A4Q4VNC1 1196 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 SCUBE3Q8IX30 993 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 RTL3Q8N8U3 475 aaKnown RBP10.81□□□□□ -0.68
ACTN1-216ENST00000556083 CELF6Q96J87 481 aaKnown RBP10.81□□□□□ -0.68
ACTN1-216ENST00000556083 INPP4AQ96PE3 977 aaPredicted RBP10.81□□□□□ -0.68
ACTN1-216ENST00000556083 SPRTNQ9H040 489 aaPredicted RBP10.81□□□□□ -0.68
ACTN1-216ENST00000556083 ST3GAL5Q9UNP4 418 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.81□□□□□ -0.68
ACTN1-216ENST00000556083 ATP6V1B1P15313 513 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 VGLL4Q14135 290 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 NR1D2Q14995 579 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 ZNF621Q6ZSS3 439 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 TFAP2DQ7Z6R9 452 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 STK32CQ86UX6 486 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 GPR180Q86V85 440 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 PIGZQ86VD9 579 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 TMC8Q8IU68 726 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 VGLL2Q8N8G2 317 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 C7orf57Q8NEG2 295 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 SLC9A7Q96T83 725 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 PCBD2Q9H0N5 130 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 NFKBIL1Q9UBC1 381 aaPredicted RBP10.81□□□□□ -0.68
ACTN1-216ENST00000556083 MAGEL2Q9UJ55 1249 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 RCVRNP35243 200 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 UGT1A5P35504 534 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 GSTM5P46439 218 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 GABRB2P47870 512 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 PDK4Q16654 411 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 SLC25A52Q3SY17 297 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 ATXN7L2Q5T6C5 722 aaPredicted RBP10.8□□□□□ -0.68
ACTN1-216ENST00000556083 LIPMQ5VYY2 423 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 SERPINA13PQ6UXR4 307 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 GPRIN3Q6ZVF9 776 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 DENND6AQ8IWF6 608 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 ZNF276Q8N554 614 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 ZSWIM2Q8NEG5 633 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 ASZ1Q8WWH4 475 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 S100ZQ8WXG8 99 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 PHF21BQ96EK2 531 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 PRICKLE1Q96MT3 831 aaPredicted RBP10.8□□□□□ -0.68
ACTN1-216ENST00000556083 HSD17B14Q9BPX1 270 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 MTRRQ9UBK8 725 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 RIC1Q4ADV7 1423 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 AP3D1O14617 1153 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 PRMT5O14744 637 aaPredicted RBP10.8□□□□□ -0.68
ACTN1-216ENST00000556083 DDNO94850 711 aaPredicted RBP10.8□□□□□ -0.68
ACTN1-216ENST00000556083 AKAP5P24588 427 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 PSMB9P28065 219 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 ICAM3P32942 547 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 ALFQ53S48 1182 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 SFRP1Q8N474 314 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 GALNT8Q9NY28 637 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 CALML5Q9NZT1 146 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 GTF2A1LQ9UNN4 478 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 ERVW-1Q9UQF0 538 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 HBS1LQ9Y450 684 aaKnown RBP10.8□□□□□ -0.68
ACTN1-216ENST00000556083 ALOX15BO15296 676 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 ADCYAP1R1P41586 468 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 MAPKAPK2P49137 400 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 BCAP31P51572 246 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 RHBDL3P58872 404 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 TAF13Q15543 124 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 TMEM44Q2T9K0 475 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 DEFB115Q30KQ5 88 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 MTX3Q5HYI7 312 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 MPP5Q8N3R9 675 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 WDR48Q8TAF3 677 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 ENKURQ8TC29 256 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 RNF145Q96MT1 663 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 RHOJQ9H4E5 214 aa10.8□□□□□ -0.68
ACTN1-216ENST00000556083 AREL1O15033 823 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 GLUD1P00367 558 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 PRNPP04156 253 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 RFX3P48380 749 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 BMPR2Q13873 1038 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 FGD3Q5JSP0 725 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 RSBN1Q5VWQ0 802 aaPredicted RBP10.79□□□□□ -0.68
ACTN1-216ENST00000556083 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.79□□□□□ -0.68
ACTN1-216ENST00000556083 PIK3C3Q8NEB9 887 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 SPATA20Q8TB22 786 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 ADAM33Q9BZ11 813 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 FSBPO95073 299 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 LRPAP1P30533 357 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 GLUD2P49448 558 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 ATN1P54259 1190 aaPredicted RBP10.79□□□□□ -0.68
ACTN1-216ENST00000556083 NOMO3P69849 1222 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 FAAP100Q0VG06 881 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 WSCD1Q658N2 575 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 LCLAT1Q6UWP7 414 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 SNX32Q86XE0 403 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 SLAIN1Q8ND83 568 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 ART4Q93070 314 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 ZNF184Q99676 751 aaPredicted RBP10.79□□□□□ -0.68
ACTN1-216ENST00000556083 TTPALQ9BTX7 342 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 SNRNP25Q9BV90 132 aaKnown RBP10.79□□□□□ -0.68
ACTN1-216ENST00000556083 LMAN2LQ9H0V9 348 aa10.79□□□□□ -0.68
ACTN1-216ENST00000556083 SSU72Q9NP77 194 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms