RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 DEPTORQ8TB45 409 aa3.08□□□□□ -1.92
SRP54-207ENST00000555535 EID2BQ96D98 161 aa3.08□□□□□ -1.92
SRP54-207ENST00000555535 TMEM41AQ96HV5 264 aa3.08□□□□□ -1.92
SRP54-207ENST00000555535 ATOH8Q96SQ7 321 aa3.08□□□□□ -1.92
SRP54-207ENST00000555535 HERC2P3Q9BVR0 1158 aa3.08□□□□□ -1.92
SRP54-207ENST00000555535 KATNAL1Q9BW62 490 aa3.08□□□□□ -1.92
SRP54-207ENST00000555535 ELAC1Q9H777 363 aaKnown RBP3.08□□□□□ -1.92
SRP54-207ENST00000555535 FBRSL1Q9HCM7 1045 aaKnown RBP3.08□□□□□ -1.92
SRP54-207ENST00000555535 PRDM8Q9NQV8 689 aa3.08□□□□□ -1.92
SRP54-207ENST00000555535 TMEM51Q9NW97 253 aa3.08□□□□□ -1.92
SRP54-207ENST00000555535 FAM90A20PA6NIJ5 464 aa3.07□□□□□ -1.92
SRP54-207ENST00000555535 CHL1O00533 1208 aa3.07□□□□□ -1.92
SRP54-207ENST00000555535 ACTL6BO94805 426 aa3.07□□□□□ -1.92
SRP54-207ENST00000555535 PARNO95453 639 aaKnown RBP3.07□□□□□ -1.92
SRP54-207ENST00000555535 VNN2O95498 520 aa3.07□□□□□ -1.92
SRP54-207ENST00000555535 CH25HO95992 272 aa3.07□□□□□ -1.92
SRP54-207ENST00000555535 IGHV4-30-4P0DP06 118 aa3.07□□□□□ -1.92
SRP54-207ENST00000555535 CYP4B1P13584 511 aa3.07□□□□□ -1.92
SRP54-207ENST00000555535 SP100P23497 879 aaPredicted RBP3.07□□□□□ -1.92
SRP54-207ENST00000555535 PPM1AP35813 382 aa3.07□□□□□ -1.92
SRP54-207ENST00000555535 RPS6KA3P51812 740 aa3.07□□□□□ -1.92
SRP54-207ENST00000555535 LUMP51884 338 aaPredicted RBP3.07□□□□□ -1.92
SRP54-207ENST00000555535 DRG2P55039 364 aaKnown RBP3.07□□□□□ -1.92
SRP54-207ENST00000555535 RPS6KA2Q15349 733 aa3.07□□□□□ -1.92
SRP54-207ENST00000555535 ZNF239Q16600 458 aaKnown RBP3.07□□□□□ -1.92
SRP54-207ENST00000555535 NCAPH2Q6IBW4 605 aa3.07□□□□□ -1.92
SRP54-207ENST00000555535 DGAT2L7PQ6IED9 249 aa3.07□□□□□ -1.92
SRP54-207ENST00000555535 RAB11FIP2Q7L804 512 aa3.07□□□□□ -1.92
SRP54-207ENST00000555535 TMC8Q8IU68 726 aa3.07□□□□□ -1.92
SRP54-207ENST00000555535 ANKRD13AQ8IZ07 590 aa3.07□□□□□ -1.92
SRP54-207ENST00000555535 CIARTQ8N365 385 aaPredicted RBP3.07□□□□□ -1.92
SRP54-207ENST00000555535 AADATQ8N5Z0 425 aa3.07□□□□□ -1.92
SRP54-207ENST00000555535 PTGR2Q8N8N7 351 aaPredicted RBP3.07□□□□□ -1.92
SRP54-207ENST00000555535 STT3BQ8TCJ2 826 aa3.07□□□□□ -1.92
SRP54-207ENST00000555535 C8orf48Q96LL4 319 aa3.07□□□□□ -1.92
SRP54-207ENST00000555535 PABPC3Q9H361 631 aaKnown RBP3.07□□□□□ -1.92
SRP54-207ENST00000555535 WDR6Q9NNW5 1121 aaKnown RBP3.07□□□□□ -1.92
SRP54-207ENST00000555535 THAP1Q9NVV9 213 aa3.07□□□□□ -1.92
SRP54-207ENST00000555535 GRHL1Q9NZI5 618 aa3.07□□□□□ -1.92
SRP54-207ENST00000555535 KCND3Q9UK17 655 aa3.07□□□□□ -1.92
SRP54-207ENST00000555535 C19orf53Q9UNZ5 99 aaPredicted RBP3.07□□□□□ -1.92
SRP54-207ENST00000555535 GOLGA6L3A6NEY3 463 aa3.06□□□□□ -1.92
SRP54-207ENST00000555535 LILRA5A6NI73 299 aa3.06□□□□□ -1.92
SRP54-207ENST00000555535 FAM157AC9JC47 383 aa3.06□□□□□ -1.92
SRP54-207ENST00000555535 C16orf97H3BN30 126 aa3.06□□□□□ -1.92
SRP54-207ENST00000555535 HNRNPRO43390 633 aaKnown RBP3.06□□□□□ -1.92
SRP54-207ENST00000555535 SERPINA4P29622 427 aa3.06□□□□□ -1.92
SRP54-207ENST00000555535 RPL3P39023 403 aaKnown RBP3.06□□□□□ -1.92
SRP54-207ENST00000555535 TECP42680 631 aa3.06□□□□□ -1.92
SRP54-207ENST00000555535 PTPN9P43378 593 aa3.06□□□□□ -1.92
SRP54-207ENST00000555535 NEK3P51956 506 aa3.06□□□□□ -1.92
SRP54-207ENST00000555535 FAM27E3Q08E93 113 aa3.06□□□□□ -1.92
SRP54-207ENST00000555535 GALNT1Q10472 559 aaPredicted RBP3.06□□□□□ -1.92
SRP54-207ENST00000555535 SREBF2Q12772 1141 aa3.06□□□□□ -1.92
SRP54-207ENST00000555535 PDCLQ13371 301 aa3.06□□□□□ -1.92
SRP54-207ENST00000555535 CAPSQ13938 189 aa3.06□□□□□ -1.92
SRP54-207ENST00000555535 LPIN1Q14693 890 aa3.06□□□□□ -1.92
SRP54-207ENST00000555535 STARD3Q14849 445 aa3.06□□□□□ -1.92
SRP54-207ENST00000555535 XKR6Q5GH73 641 aa3.06□□□□□ -1.92
SRP54-207ENST00000555535 LIN54Q6MZP7 749 aa3.06□□□□□ -1.92
SRP54-207ENST00000555535 SYNE3Q6ZMZ3 975 aa3.06□□□□□ -1.92
SRP54-207ENST00000555535 SRLQ86TD4 932 aa3.06□□□□□ -1.92
SRP54-207ENST00000555535 ZNF441Q8N8Z8 693 aa3.06□□□□□ -1.92
SRP54-207ENST00000555535 KBTBD3Q8NAB2 608 aa3.06□□□□□ -1.92
SRP54-207ENST00000555535 OR13A1Q8NGR1 328 aa3.06□□□□□ -1.92
SRP54-207ENST00000555535 MYD88Q99836 296 aa3.06□□□□□ -1.92
SRP54-207ENST00000555535 DDX23Q9BUQ8 820 aaKnown RBP3.06□□□□□ -1.92
SRP54-207ENST00000555535 SMARCAL1Q9NZC9 954 aa3.06□□□□□ -1.92
SRP54-207ENST00000555535 LRFN1Q9P244 771 aa3.06□□□□□ -1.92
SRP54-207ENST00000555535 HDAC6Q9UBN7 1215 aa3.06□□□□□ -1.92
SRP54-207ENST00000555535 MORC2Q9Y6X9 1032 aaPredicted RBP3.06□□□□□ -1.92
SRP54-207ENST00000555535 A0A096LPK6 155 aa3.05□□□□□ -1.92
SRP54-207ENST00000555535 FFAR2O15552 330 aa3.05□□□□□ -1.92
SRP54-207ENST00000555535 CCNT1O60563 726 aaKnown RBP3.05□□□□□ -1.92
SRP54-207ENST00000555535 KDM4BO94953 1096 aa3.05□□□□□ -1.92
SRP54-207ENST00000555535 ITGA2BP08514 1039 aa3.05□□□□□ -1.92
SRP54-207ENST00000555535 MYF6P23409 242 aa3.05□□□□□ -1.92
SRP54-207ENST00000555535 YWHAQP27348 245 aa3.05□□□□□ -1.92
SRP54-207ENST00000555535 MARK3P27448 753 aa3.05□□□□□ -1.92
SRP54-207ENST00000555535 SKIV2L2P42285 1042 aaKnown RBP3.05□□□□□ -1.92
SRP54-207ENST00000555535 LIFRP42702 1097 aa3.05□□□□□ -1.92
SRP54-207ENST00000555535 GPR12P47775 334 aa3.05□□□□□ -1.92
SRP54-207ENST00000555535 MTNR1AP48039 350 aa3.05□□□□□ -1.92
SRP54-207ENST00000555535 MVDP53602 400 aa3.05□□□□□ -1.92
SRP54-207ENST00000555535 AP2B1P63010 937 aa3.05□□□□□ -1.92
SRP54-207ENST00000555535 PFKFB4Q16877 469 aa3.05□□□□□ -1.92
SRP54-207ENST00000555535 RRAGAQ7L523 313 aa3.05□□□□□ -1.92
SRP54-207ENST00000555535 SFR1Q86XK3 245 aa3.05□□□□□ -1.92
SRP54-207ENST00000555535 METTL27Q8N6F8 245 aaPredicted RBP3.05□□□□□ -1.92
SRP54-207ENST00000555535 KCNH5Q8NCM2 988 aa3.05□□□□□ -1.92
SRP54-207ENST00000555535 MCPH1Q8NEM0 835 aa3.05□□□□□ -1.92
SRP54-207ENST00000555535 RASSF8Q8NHQ8 419 aa3.05□□□□□ -1.92
SRP54-207ENST00000555535 TBC1D22AQ8WUA7 517 aa3.05□□□□□ -1.92
SRP54-207ENST00000555535 TRIB2Q92519 343 aa3.05□□□□□ -1.92
SRP54-207ENST00000555535 CPT1BQ92523 772 aa3.05□□□□□ -1.92
SRP54-207ENST00000555535 C3orf49Q96BT1 292 aa3.05□□□□□ -1.92
SRP54-207ENST00000555535 MMTAG2Q9BU76 263 aaKnown RBP3.05□□□□□ -1.92
SRP54-207ENST00000555535 LRRC4Q9HBW1 653 aa3.05□□□□□ -1.92
SRP54-207ENST00000555535 CCDC177Q9NQR7 707 aaPredicted RBP3.05□□□□□ -1.92
SRP54-207ENST00000555535 HERC5Q9UII4 1024 aaKnown RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms