RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 BDNFP23560 247 aa17.21■□□□□ 0.35
PPP4R3A-208ENST00000555462 EEF1B2P24534 225 aaKnown RBP17.21■□□□□ 0.35
PPP4R3A-208ENST00000555462 NAA20P61599 178 aa17.21■□□□□ 0.35
PPP4R3A-208ENST00000555462 CTBSQ01459 385 aa17.21■□□□□ 0.35
PPP4R3A-208ENST00000555462 GRIK4Q16099 956 aa17.21■□□□□ 0.35
PPP4R3A-208ENST00000555462 CHSY3Q70JA7 882 aa17.21■□□□□ 0.35
PPP4R3A-208ENST00000555462 WNT8BQ93098 351 aa17.21■□□□□ 0.35
PPP4R3A-208ENST00000555462 RMND5BQ96G75 393 aaPredicted RBP17.21■□□□□ 0.35
PPP4R3A-208ENST00000555462 KLHL5Q96PQ7 755 aa17.21■□□□□ 0.35
PPP4R3A-208ENST00000555462 PAAF1Q9BRP4 392 aa17.21■□□□□ 0.35
PPP4R3A-208ENST00000555462 FSD1LQ9BXM9 530 aa17.21■□□□□ 0.35
PPP4R3A-208ENST00000555462 STN1Q9H668 368 aaKnown RBP17.21■□□□□ 0.35
PPP4R3A-208ENST00000555462 WDCPQ9H6R7 721 aa17.21■□□□□ 0.35
PPP4R3A-208ENST00000555462 NCKIPSDQ9NZQ3 722 aa17.21■□□□□ 0.35
PPP4R3A-208ENST00000555462 CNOT6Q9ULM6 557 aaKnown RBP17.21■□□□□ 0.35
PPP4R3A-208ENST00000555462 DMTF1Q9Y222 760 aa17.21■□□□□ 0.35
PPP4R3A-208ENST00000555462 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.21■□□□□ 0.35
PPP4R3A-208ENST00000555462 H3BMM5 538 aa17.21■□□□□ 0.35
PPP4R3A-208ENST00000555462 TIMM44O43615 452 aa17.21■□□□□ 0.35
PPP4R3A-208ENST00000555462 MAN1A2O60476 641 aa17.21■□□□□ 0.35
PPP4R3A-208ENST00000555462 CYP2B6P20813 491 aa17.21■□□□□ 0.35
PPP4R3A-208ENST00000555462 MAGEA10P43363 369 aaPredicted RBP17.21■□□□□ 0.35
PPP4R3A-208ENST00000555462 ZNF280AP59817 542 aaPredicted RBP17.21■□□□□ 0.35
PPP4R3A-208ENST00000555462 OGFOD2Q6N063 350 aa17.21■□□□□ 0.35
PPP4R3A-208ENST00000555462 TTC33Q6PID6 262 aaPredicted RBP17.21■□□□□ 0.35
PPP4R3A-208ENST00000555462 CENPIQ92674 756 aaPredicted RBP17.21■□□□□ 0.35
PPP4R3A-208ENST00000555462 VPS33AQ96AX1 596 aa17.21■□□□□ 0.35
PPP4R3A-208ENST00000555462 DCPSQ96C86 337 aaKnown RBP17.21■□□□□ 0.35
PPP4R3A-208ENST00000555462 OLFM1Q99784 485 aa17.21■□□□□ 0.35
PPP4R3A-208ENST00000555462 MUC3BQ9H195 1237 aa17.21■□□□□ 0.35
PPP4R3A-208ENST00000555462 PRSS51A0A1B0GVH4 220 aa17.21■□□□□ 0.34
PPP4R3A-208ENST00000555462 A0A1W2PPW3 197 aa17.21■□□□□ 0.34
PPP4R3A-208ENST00000555462 ATP6V1B2P21281 511 aa17.21■□□□□ 0.34
PPP4R3A-208ENST00000555462 NR1H2P55055 460 aa17.21■□□□□ 0.34
PPP4R3A-208ENST00000555462 SULT2A1Q06520 285 aa17.21■□□□□ 0.34
PPP4R3A-208ENST00000555462 TRIM25Q14258 630 aaKnown RBP17.21■□□□□ 0.34
PPP4R3A-208ENST00000555462 LPIN1Q14693 890 aa17.21■□□□□ 0.34
PPP4R3A-208ENST00000555462 CLEC14AQ86T13 490 aa17.21■□□□□ 0.34
PPP4R3A-208ENST00000555462 APBB2Q92870 758 aa17.21■□□□□ 0.34
PPP4R3A-208ENST00000555462 NSUN5Q96P11 429 aaKnown RBP17.21■□□□□ 0.34
PPP4R3A-208ENST00000555462 SIKE1Q9BRV8 207 aa17.21■□□□□ 0.34
PPP4R3A-208ENST00000555462 C11orf84Q9BUA3 381 aaPredicted RBP17.21■□□□□ 0.34
PPP4R3A-208ENST00000555462 C1QTNF1Q9BXJ1 281 aa17.21■□□□□ 0.34
PPP4R3A-208ENST00000555462 CACNA2D2Q9NY47 1150 aa17.21■□□□□ 0.34
PPP4R3A-208ENST00000555462 KIAA1257Q9ULG3 409 aa17.21■□□□□ 0.34
PPP4R3A-208ENST00000555462 RAB26Q9ULW5 256 aa17.21■□□□□ 0.34
PPP4R3A-208ENST00000555462 PHIPQ8WWQ0 1821 aa17.2■□□□□ 0.34
PPP4R3A-208ENST00000555462 GIPC1O14908 333 aa17.2■□□□□ 0.34
PPP4R3A-208ENST00000555462 MPOP05164 745 aa17.2■□□□□ 0.34
PPP4R3A-208ENST00000555462 PRSS56P0CW18 603 aa17.2■□□□□ 0.34
PPP4R3A-208ENST00000555462 OXTRP30559 389 aa17.2■□□□□ 0.34
PPP4R3A-208ENST00000555462 DCTN2Q13561 401 aaKnown RBP17.2■□□□□ 0.34
PPP4R3A-208ENST00000555462 GPR158Q5T848 1215 aa17.2■□□□□ 0.34
PPP4R3A-208ENST00000555462 CLEC20AQ6ZU45 233 aa17.2■□□□□ 0.34
PPP4R3A-208ENST00000555462 ADCY4Q8NFM4 1077 aa17.2■□□□□ 0.34
PPP4R3A-208ENST00000555462 SCAMP5Q8TAC9 235 aa17.2■□□□□ 0.34
PPP4R3A-208ENST00000555462 OLAHQ9NV23 265 aa17.2■□□□□ 0.34
PPP4R3A-208ENST00000555462 MAGED1Q9Y5V3 778 aaPredicted RBP17.2■□□□□ 0.34
PPP4R3A-208ENST00000555462 HEATR9A2RTY3 570 aa17.2■□□□□ 0.34
PPP4R3A-208ENST00000555462 TRIM38O00635 465 aa17.2■□□□□ 0.34
PPP4R3A-208ENST00000555462 KCNH1O95259 989 aa17.2■□□□□ 0.34
PPP4R3A-208ENST00000555462 CD247P20963 164 aa17.2■□□□□ 0.34
PPP4R3A-208ENST00000555462 TPP2P29144 1249 aaPredicted RBP17.2■□□□□ 0.34
PPP4R3A-208ENST00000555462 TBCELQ5QJ74 424 aa17.2■□□□□ 0.34
PPP4R3A-208ENST00000555462 SDHAF4Q5VUM1 108 aa17.2■□□□□ 0.34
PPP4R3A-208ENST00000555462 HDAC11Q96DB2 347 aa17.2■□□□□ 0.34
PPP4R3A-208ENST00000555462 STAP1Q9ULZ2 295 aa17.2■□□□□ 0.34
PPP4R3A-208ENST00000555462 PRPF19Q9UMS4 504 aaKnown RBP17.2■□□□□ 0.34
PPP4R3A-208ENST00000555462 A0A0U1RQS6 177 aa17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 CASTOR2A6NHX0 329 aa17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 DCLK1O15075 740 aa17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 PGFP49763 221 aa17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 FOXA1P55317 472 aa17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 RAB10P61026 200 aa17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 ARHGAP1Q07960 439 aa17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 PAQR9Q6ZVX9 377 aa17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 CUZD1Q86UP6 607 aa17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 SNX29P2Q8IUI4 249 aa17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 SPPL2BQ8TCT7 592 aa17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 C12orf42Q96LP6 360 aa17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 CYP2S1Q96SQ9 504 aa17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 NAT9Q9BTE0 207 aa17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 TIMM22Q9Y584 194 aa17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 ANK1P16157 1881 aa17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 GOLGA8CPA6NN73 597 aa17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 INPP4BO15327 924 aa17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 STRNO43815 780 aa17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 DDNO94850 711 aaPredicted RBP17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 GLUD2P49448 558 aa17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 PIGFQ07326 219 aa17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 BNIP3Q12983 259 aa17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 TWF2Q6IBS0 349 aaKnown RBP17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 MAGEE2Q8TD90 523 aaPredicted RBP17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 SGCDQ92629 289 aa17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 HAUS8Q9BT25 410 aa17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 FAM96AQ9H5X1 160 aa17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 ZNF112Q9UJU3 913 aa17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 TMCO1Q9UM00 188 aa17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 MYRFQ9Y2G1 1151 aa17.19■□□□□ 0.34
PPP4R3A-208ENST00000555462 A0A1B0GTL3 188 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms