RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 AREL1O15033 823 aa12.49□□□□□ -0.41
SYNE2-214ENST00000554928 BCAT2O15382 392 aaPredicted RBP12.49□□□□□ -0.41
SYNE2-214ENST00000554928 DDX3YO15523 660 aaKnown RBP12.49□□□□□ -0.41
SYNE2-214ENST00000554928 LATO43561 262 aa12.49□□□□□ -0.41
SYNE2-214ENST00000554928 CST8O60676 142 aa12.49□□□□□ -0.41
SYNE2-214ENST00000554928 ENGP17813 658 aa12.49□□□□□ -0.41
SYNE2-214ENST00000554928 CTNNA2P26232 953 aa12.49□□□□□ -0.41
SYNE2-214ENST00000554928 CD27P26842 260 aa12.49□□□□□ -0.41
SYNE2-214ENST00000554928 MMP13P45452 471 aa12.49□□□□□ -0.41
SYNE2-214ENST00000554928 MAPK8P45983 427 aa12.49□□□□□ -0.41
SYNE2-214ENST00000554928 CSNK1DP48730 415 aa12.49□□□□□ -0.41
SYNE2-214ENST00000554928 SCNN1BP51168 640 aa12.49□□□□□ -0.41
SYNE2-214ENST00000554928 CCR5P51681 352 aa12.49□□□□□ -0.41
SYNE2-214ENST00000554928 SFSWAPQ12872 951 aaKnown RBP12.49□□□□□ -0.41
SYNE2-214ENST00000554928 ZBTB17Q13105 803 aa12.49□□□□□ -0.41
SYNE2-214ENST00000554928 ZNF235Q14590 738 aa12.49□□□□□ -0.41
SYNE2-214ENST00000554928 PTPRRQ15256 657 aa12.49□□□□□ -0.41
SYNE2-214ENST00000554928 IFI16Q16666 785 aaKnown RBP12.49□□□□□ -0.41
SYNE2-214ENST00000554928 RSPO4Q2I0M5 234 aaPredicted RBP12.49□□□□□ -0.41
SYNE2-214ENST00000554928 ZNF284Q2VY69 593 aa12.49□□□□□ -0.41
SYNE2-214ENST00000554928 LCE2DQ5TA82 110 aaPredicted RBP12.49□□□□□ -0.41
SYNE2-214ENST00000554928 FBXL19Q6PCT2 694 aa12.49□□□□□ -0.41
SYNE2-214ENST00000554928 VSIG1Q86XK7 387 aa12.49□□□□□ -0.41
SYNE2-214ENST00000554928 KIAA1524Q8TCG1 905 aa12.49□□□□□ -0.41
SYNE2-214ENST00000554928 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.49□□□□□ -0.41
SYNE2-214ENST00000554928 PPP1R16AQ96I34 528 aa12.49□□□□□ -0.41
SYNE2-214ENST00000554928 ZNF830Q96NB3 372 aaPredicted RBP12.49□□□□□ -0.41
SYNE2-214ENST00000554928 TSGA13Q96PP4 275 aa12.49□□□□□ -0.41
SYNE2-214ENST00000554928 SMIM14Q96QK8 99 aa12.49□□□□□ -0.41
SYNE2-214ENST00000554928 MGME1Q9BQP7 344 aa12.49□□□□□ -0.41
SYNE2-214ENST00000554928 CPEB1Q9BZB8 566 aaKnown RBP12.49□□□□□ -0.41
SYNE2-214ENST00000554928 KCNF1Q9H3M0 494 aa12.49□□□□□ -0.41
SYNE2-214ENST00000554928 SUV39H2Q9H5I1 410 aa12.49□□□□□ -0.41
SYNE2-214ENST00000554928 C10orf88Q9H8K7 445 aa12.49□□□□□ -0.41
SYNE2-214ENST00000554928 IL21RQ9HBE5 538 aa12.49□□□□□ -0.41
SYNE2-214ENST00000554928 SLC6A14Q9UN76 642 aa12.49□□□□□ -0.41
SYNE2-214ENST00000554928 PCDHGC4Q9Y5F7 938 aa12.49□□□□□ -0.41
SYNE2-214ENST00000554928 CEP250Q9BV73 2442 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 DCHS1Q96JQ0 3298 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 A0A1B0GTW7 788 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 A0A1W2PR77 199 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 TSPAN11A1L157 253 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 C4orf47A7E2U8 309 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 TRAFD1O14545 582 aaPredicted RBP12.48□□□□□ -0.41
SYNE2-214ENST00000554928 KCNK3O14649 394 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 MATN3O15232 486 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 RAD51BO15315 384 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 SLC31A1O15431 190 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 PCDH8O95206 1070 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 ZRANB2O95218 330 aaKnown RBP eCLIP12.48□□□□□ -0.41
SYNE2-214ENST00000554928 HLA-DQB2P05538 268 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 SERPINF2P08697 491 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 PYGMP11217 842 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 CCNCP24863 283 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 HOXD12P35452 270 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 DSC2Q02487 901 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 LMNB2Q03252 620 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 PPIDQ08752 370 aaKnown RBP12.48□□□□□ -0.41
SYNE2-214ENST00000554928 NIPAL4Q0D2K0 466 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 TRAF2Q12933 501 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 GRIK2Q13002 908 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 ZNF211Q13398 564 aaPredicted RBP12.48□□□□□ -0.41
SYNE2-214ENST00000554928 TMEM259Q4ZIN3 620 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 MARC1Q5VT66 337 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 TRIM69Q86WT6 500 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 HORMAD1Q86X24 394 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 CCDC50Q8IVM0 306 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 CCDC13Q8IYE1 715 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 RCOR2Q8IZ40 523 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 GPR161Q8N6U8 529 aaKnown RBP12.48□□□□□ -0.41
SYNE2-214ENST00000554928 CNTD1Q8N815 330 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 CCNYQ8ND76 341 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 CCDC112Q8NEF3 446 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 EXD1Q8NHP7 514 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 HDAC11Q96DB2 347 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 LRIG1Q96JA1 1093 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 NUDCD1Q96RS6 583 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 FAM118BQ9BPY3 351 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 GTPBP2Q9BX10 602 aaKnown RBP12.48□□□□□ -0.41
SYNE2-214ENST00000554928 OSBPL1AQ9BXW6 950 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 MAK16Q9BXY0 300 aaKnown RBP12.48□□□□□ -0.41
SYNE2-214ENST00000554928 PREBQ9HCU5 417 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 RBM22Q9NW64 420 aaKnown RBP eCLIP12.48□□□□□ -0.41
SYNE2-214ENST00000554928 GUCA1BQ9UMX6 200 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 DNAH14Q0VDD8 3507 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 PLXNA2O75051 1894 aa12.48□□□□□ -0.41
SYNE2-214ENST00000554928 A0A0U1RQS6 177 aa12.47□□□□□ -0.41
SYNE2-214ENST00000554928 IGLON5A6NGN9 336 aa12.47□□□□□ -0.41
SYNE2-214ENST00000554928 H0Y8X5 98 aa12.47□□□□□ -0.41
SYNE2-214ENST00000554928 JCHAINP01591 159 aa12.47□□□□□ -0.41
SYNE2-214ENST00000554928 CCNB1P14635 433 aa12.47□□□□□ -0.41
SYNE2-214ENST00000554928 CLDN2P57739 230 aa12.47□□□□□ -0.41
SYNE2-214ENST00000554928 RAD51Q06609 339 aa12.47□□□□□ -0.41
SYNE2-214ENST00000554928 NSUN2Q08J23 767 aaKnown RBP eCLIP12.47□□□□□ -0.41
SYNE2-214ENST00000554928 AP1B1Q10567 949 aa12.47□□□□□ -0.41
SYNE2-214ENST00000554928 HNRNPDQ14103 355 aaKnown RBP12.47□□□□□ -0.41
SYNE2-214ENST00000554928 KIF19Q2TAC6 998 aa12.47□□□□□ -0.41
SYNE2-214ENST00000554928 ODF2Q5BJF6 829 aa12.47□□□□□ -0.41
SYNE2-214ENST00000554928 TFDP3Q5H9I0 405 aa12.47□□□□□ -0.41
SYNE2-214ENST00000554928 PRAMEF14Q5SWL7 426 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms