RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 CD180Q99467 661 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 CTDSP1Q9GZU7 261 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 UNC45AQ9H3U1 944 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 ACAD9Q9H845 621 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 JMJD4Q9H9V9 463 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 TXNRD2Q9NNW7 524 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 MLXIPLQ9NP71 852 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 IPO11Q9UI26 975 aaKnown RBP1.65□□□□□ -2.15
PRPF39-208ENST00000554785 CNOT7Q9UIV1 285 aaKnown RBP1.65□□□□□ -2.15
PRPF39-208ENST00000554785 HSF4Q9ULV5 492 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 TBX20Q9UMR3 447 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 TNFSF13BQ9Y275 285 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 TMEM98Q9Y2Y6 226 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 ANKARQ7Z5J8 1434 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 KIF13BQ9NQT8 1826 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 NOTCH4Q99466 2003 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 PALLDQ8WX93 1383 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 ABCC11Q96J66 1382 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 RNF123Q5XPI4 1314 aa1.65□□□□□ -2.15
PRPF39-208ENST00000554785 SLC22A23A1A5C7 686 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 KCNJ18B7U540 433 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 GUCY1B2O75343 617 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 TULP3O75386 442 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 HLA-DQA2P01906 255 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 HSPA8P11142 646 aaKnown RBP1.64□□□□□ -2.15
PRPF39-208ENST00000554785 TFEBP19484 476 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 KRT9P35527 623 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 HNF1BP35680 557 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 STAT1P42224 750 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 CTCFP49711 727 aaPredicted RBP1.64□□□□□ -2.15
PRPF39-208ENST00000554785 SLC12A2P55011 1212 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 NR1H2P55055 460 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 FOXG1P55316 489 aaPredicted RBP1.64□□□□□ -2.15
PRPF39-208ENST00000554785 MPP1Q00013 466 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 DDX10Q13206 875 aaKnown RBP1.64□□□□□ -2.15
PRPF39-208ENST00000554785 STIM1Q13586 685 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 BYSLQ13895 437 aaKnown RBP1.64□□□□□ -2.15
PRPF39-208ENST00000554785 SEMA3AQ14563 771 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 NAA25Q14CX7 972 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 RBMS2Q15434 407 aaKnown RBP1.64□□□□□ -2.15
PRPF39-208ENST00000554785 NFIL3Q16649 462 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 EARS2Q5JPH6 523 aaKnown RBP1.64□□□□□ -2.15
PRPF39-208ENST00000554785 SH2D4BQ5SQS7 431 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 SLC9C2Q5TAH2 1124 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 NAA35Q5VZE5 725 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 SHC4Q6S5L8 630 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 RNF144BQ7Z419 303 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 KLBQ86Z14 1044 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 ARL14EPQ8N8R7 260 aaPredicted RBP1.64□□□□□ -2.15
PRPF39-208ENST00000554785 PRSS3P2Q8NHM4 247 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 WIPF2Q8TF74 440 aaPredicted RBP1.64□□□□□ -2.15
PRPF39-208ENST00000554785 ST8SIA4Q92187 359 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 NCSTNQ92542 709 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 IP6K1Q92551 441 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 WASF1Q92558 559 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 RRP36Q96EU6 259 aaKnown RBP1.64□□□□□ -2.15
PRPF39-208ENST00000554785 FAM118BQ9BPY3 351 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 CDK19Q9BWU1 502 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 PHF7Q9BWX1 381 aaPredicted RBP1.64□□□□□ -2.15
PRPF39-208ENST00000554785 NPLQ9BXD5 320 aaPredicted RBP1.64□□□□□ -2.15
PRPF39-208ENST00000554785 CADM1Q9BY67 442 aaKnown RBP1.64□□□□□ -2.15
PRPF39-208ENST00000554785 PAIP1Q9H074 479 aaKnown RBP1.64□□□□□ -2.15
PRPF39-208ENST00000554785 XRN2Q9H0D6 950 aaKnown RBP eCLIP1.64□□□□□ -2.15
PRPF39-208ENST00000554785 MROH8Q9H579 483 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 IL21RQ9HBE5 538 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 TMEM248Q9NWD8 314 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 ARL15Q9NXU5 204 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 ALKBH4Q9NXW9 302 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 WWOXQ9NZC7 414 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 FBXO4Q9UKT5 387 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 ARHGAP26Q9UNA1 814 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 SLC8A2Q9UPR5 921 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 CYP46A1Q9Y6A2 500 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 SCN11AQ9UI33 1791 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 LTBP1Q14766 1721 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 MEGF6O75095 1541 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 DNAH12Q6ZR08 3092 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 AFDNP55196 1824 aaKnown RBP1.64□□□□□ -2.15
PRPF39-208ENST00000554785 TCRBV7S3A2A0A539 114 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 TMEM247A6NEH6 219 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 FAM90A7PA6NKC0 464 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 C2CD4BA6NLJ0 364 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 FAM90A22PA8MWA6 464 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 FAM90A12PA8MX19 464 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 FAM90A23PA8MXZ1 464 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 STRNO43815 780 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 DDNO94850 711 aaPredicted RBP1.64□□□□□ -2.15
PRPF39-208ENST00000554785 NFATC1O95644 943 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 FGBP02675 491 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 ATP1A3P13637 1013 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 TNFAIP3P21580 790 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 TYK2P29597 1187 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 CCKBRP32239 447 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 GPD2P43304 727 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 RPP30P78346 268 aaKnown RBP1.64□□□□□ -2.15
PRPF39-208ENST00000554785 RHAGQ02094 409 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 GHRHRQ02643 423 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 CFHR1Q03591 330 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 ZNF91Q05481 1191 aa1.64□□□□□ -2.15
PRPF39-208ENST00000554785 ZBTB16Q05516 673 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms