RNA–Protein interactions for RNA: ENST00000554768.5

MTHFD1-209, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-209ENST00000554768 HORMAD1Q86X24 394 aa13.06□□□□□ -0.32
MTHFD1-209ENST00000554768 RFX6Q8HWS3 928 aa13.06□□□□□ -0.32
MTHFD1-209ENST00000554768 RNF10Q8N5U6 811 aaKnown RBP13.06□□□□□ -0.32
MTHFD1-209ENST00000554768 RAB7BQ96AH8 199 aa13.06□□□□□ -0.32
MTHFD1-209ENST00000554768 OLFM3Q96PB7 478 aa13.06□□□□□ -0.32
MTHFD1-209ENST00000554768 LGMNQ99538 433 aa13.06□□□□□ -0.32
MTHFD1-209ENST00000554768 NUSAP1Q9BXS6 441 aaKnown RBP13.06□□□□□ -0.32
MTHFD1-209ENST00000554768 ATP13A3Q9H7F0 1226 aa13.06□□□□□ -0.32
MTHFD1-209ENST00000554768 FSCN3Q9NQT6 498 aa13.06□□□□□ -0.32
MTHFD1-209ENST00000554768 DCHS1Q96JQ0 3298 aa13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 NUP205Q92621 2012 aa13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 hCG_1818297A0A087WSY0 165 aa13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 CCDC66A2RUB6 948 aa13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 ARHGAP33O14559 1287 aa13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 CDX4O14627 284 aaPredicted RBP13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 TSPAN6O43657 245 aa13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 CST8O60676 142 aa13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 PCDH8O95206 1070 aa13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 CCNB1P14635 433 aa13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 ITIH2P19823 946 aa13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 MAT2AP31153 395 aaKnown RBP13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 NUDT1P36639 197 aa13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 MAPK8P45983 427 aa13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 NR2C2P49116 596 aa13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 CSNK1EP49674 416 aaKnown RBP13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 LIMK1P53667 647 aa13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 AP1S1P61966 158 aa13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 DYNLT1P63172 113 aa13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 RACK1P63244 317 aaKnown RBP13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 BNC1Q01954 994 aa13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 PPIDQ08752 370 aaKnown RBP13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 PDK1Q15118 436 aa13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 RSPO4Q2I0M5 234 aaPredicted RBP13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 ZNF284Q2VY69 593 aa13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 TMEM259Q4ZIN3 620 aa13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 TFDP3Q5H9I0 405 aa13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 STPG1Q5TH74 334 aa13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 TIGD7Q6NT04 549 aaPredicted RBP13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 PRPF39Q86UA1 669 aaKnown RBP13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 BBS5Q8N3I7 341 aa13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 CCNYQ8ND76 341 aa13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 ALG3Q92685 438 aa13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 HDAC11Q96DB2 347 aa13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 ECHDC3Q96DC8 303 aa13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 RBM41Q96IZ5 413 aaKnown RBP13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 FEM1CQ96JP0 617 aa13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 NUDCD1Q96RS6 583 aa13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 MGME1Q9BQP7 344 aa13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 NOD2Q9HC29 1040 aa13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 SAE1Q9UBE0 346 aaPredicted RBP13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 ZFR2Q9UPR6 939 aaKnown RBP13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 DMTF1Q9Y222 760 aa13.05□□□□□ -0.32
MTHFD1-209ENST00000554768 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 C4orf47A7E2U8 309 aa13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 TRAFD1O14545 582 aaPredicted RBP13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 SERPINA4P29622 427 aa13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 SUOXP51687 545 aa13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 RWDD2BP57060 319 aa13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 COPS2P61201 443 aa13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 MAXP61244 160 aa13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 RPS21P63220 83 aaKnown RBP13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 BCL2L1Q07817 233 aa13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 PPP2R5EQ16537 467 aa13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 UGP2Q16851 508 aa13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 SETMARQ53H47 684 aaPredicted RBP13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 RALGPS1Q5JS13 557 aa13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 LRRC73Q5JTD7 316 aa13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 KAZNQ674X7 775 aa13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 SEL1L3Q68CR1 1132 aa13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 BRAT1Q6PJG6 821 aa13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 ZNF662Q6ZS27 426 aa13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 PEX26Q7Z412 305 aa13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 ZSWIM9Q86XI8 627 aa13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 CCDC50Q8IVM0 306 aa13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 CCDC13Q8IYE1 715 aa13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 SYCE1Q8N0S2 351 aa13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 NETO1Q8TDF5 533 aa13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 SPOCK2Q92563 424 aa13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 RMDN1Q96DB5 314 aa13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 SERAC1Q96JX3 654 aa13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 SLC6A18Q96N87 628 aa13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 ZNF830Q96NB3 372 aaPredicted RBP13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 HERPUD2Q9BSE4 406 aa13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 EDEM2Q9BV94 578 aa13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 C1QTNF2Q9BXJ5 285 aa13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 HEMGNQ9BXL5 484 aa13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 SLC17A9Q9BYT1 436 aa13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 BRD8Q9H0E9 1235 aa13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 NT5MQ9NPB1 228 aa13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 RBM22Q9NW64 420 aaKnown RBP eCLIP13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 DLL3Q9NYJ7 618 aa13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 AMACRQ9UHK6 382 aa13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 GGT7Q9UJ14 662 aa13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 AMFRQ9UKV5 643 aa13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 ITM2BQ9Y287 266 aa13.04□□□□□ -0.32
MTHFD1-209ENST00000554768 A0A1B0GVT2 93 aa13.03□□□□□ -0.32
MTHFD1-209ENST00000554768 A0A1W2PR77 199 aa13.03□□□□□ -0.32
MTHFD1-209ENST00000554768 KCNK1O00180 336 aa13.03□□□□□ -0.32
MTHFD1-209ENST00000554768 SLC30A4O14863 429 aa13.03□□□□□ -0.32
MTHFD1-209ENST00000554768 VILLO15195 856 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms