RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 RFX6Q8HWS3 928 aa13.06□□□□□ -0.32
MTHFD1-208ENST00000554739 RNF10Q8N5U6 811 aaKnown RBP13.06□□□□□ -0.32
MTHFD1-208ENST00000554739 RAB7BQ96AH8 199 aa13.06□□□□□ -0.32
MTHFD1-208ENST00000554739 OLFM3Q96PB7 478 aa13.06□□□□□ -0.32
MTHFD1-208ENST00000554739 LGMNQ99538 433 aa13.06□□□□□ -0.32
MTHFD1-208ENST00000554739 NUSAP1Q9BXS6 441 aaKnown RBP13.06□□□□□ -0.32
MTHFD1-208ENST00000554739 ATP13A3Q9H7F0 1226 aa13.06□□□□□ -0.32
MTHFD1-208ENST00000554739 FSCN3Q9NQT6 498 aa13.06□□□□□ -0.32
MTHFD1-208ENST00000554739 DCHS1Q96JQ0 3298 aa13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 NUP205Q92621 2012 aa13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 hCG_1818297A0A087WSY0 165 aa13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 CCDC66A2RUB6 948 aa13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 ARHGAP33O14559 1287 aa13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 CDX4O14627 284 aaPredicted RBP13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 TSPAN6O43657 245 aa13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 CST8O60676 142 aa13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 PCDH8O95206 1070 aa13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 CCNB1P14635 433 aa13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 ITIH2P19823 946 aa13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 MAT2AP31153 395 aaKnown RBP13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 NUDT1P36639 197 aa13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 MAPK8P45983 427 aa13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 NR2C2P49116 596 aa13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 CSNK1EP49674 416 aaKnown RBP13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 LIMK1P53667 647 aa13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 AP1S1P61966 158 aa13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 DYNLT1P63172 113 aa13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 RACK1P63244 317 aaKnown RBP13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 BNC1Q01954 994 aa13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 PPIDQ08752 370 aaKnown RBP13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 PDK1Q15118 436 aa13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 RSPO4Q2I0M5 234 aaPredicted RBP13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 ZNF284Q2VY69 593 aa13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 TMEM259Q4ZIN3 620 aa13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 TFDP3Q5H9I0 405 aa13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 STPG1Q5TH74 334 aa13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 TIGD7Q6NT04 549 aaPredicted RBP13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 PRPF39Q86UA1 669 aaKnown RBP13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 BBS5Q8N3I7 341 aa13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 CCNYQ8ND76 341 aa13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 ALG3Q92685 438 aa13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 HDAC11Q96DB2 347 aa13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 ECHDC3Q96DC8 303 aa13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 RBM41Q96IZ5 413 aaKnown RBP13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 FEM1CQ96JP0 617 aa13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 NUDCD1Q96RS6 583 aa13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 MGME1Q9BQP7 344 aa13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 NOD2Q9HC29 1040 aa13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 SAE1Q9UBE0 346 aaPredicted RBP13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 ZFR2Q9UPR6 939 aaKnown RBP13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 DMTF1Q9Y222 760 aa13.05□□□□□ -0.32
MTHFD1-208ENST00000554739 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 C4orf47A7E2U8 309 aa13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 TRAFD1O14545 582 aaPredicted RBP13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 SERPINA4P29622 427 aa13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 SUOXP51687 545 aa13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 RWDD2BP57060 319 aa13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 COPS2P61201 443 aa13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 MAXP61244 160 aa13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 RPS21P63220 83 aaKnown RBP13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 BCL2L1Q07817 233 aa13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 PPP2R5EQ16537 467 aa13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 UGP2Q16851 508 aa13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 SETMARQ53H47 684 aaPredicted RBP13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 RALGPS1Q5JS13 557 aa13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 LRRC73Q5JTD7 316 aa13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 KAZNQ674X7 775 aa13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 SEL1L3Q68CR1 1132 aa13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 BRAT1Q6PJG6 821 aa13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 ZNF662Q6ZS27 426 aa13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 PEX26Q7Z412 305 aa13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 ZSWIM9Q86XI8 627 aa13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 CCDC50Q8IVM0 306 aa13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 CCDC13Q8IYE1 715 aa13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 SYCE1Q8N0S2 351 aa13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 NETO1Q8TDF5 533 aa13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 SPOCK2Q92563 424 aa13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 RMDN1Q96DB5 314 aa13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 SERAC1Q96JX3 654 aa13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 SLC6A18Q96N87 628 aa13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 ZNF830Q96NB3 372 aaPredicted RBP13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 HERPUD2Q9BSE4 406 aa13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 EDEM2Q9BV94 578 aa13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 C1QTNF2Q9BXJ5 285 aa13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 HEMGNQ9BXL5 484 aa13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 SLC17A9Q9BYT1 436 aa13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 BRD8Q9H0E9 1235 aa13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 NT5MQ9NPB1 228 aa13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 RBM22Q9NW64 420 aaKnown RBP eCLIP13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 DLL3Q9NYJ7 618 aa13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 AMACRQ9UHK6 382 aa13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 GGT7Q9UJ14 662 aa13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 AMFRQ9UKV5 643 aa13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 ITM2BQ9Y287 266 aa13.04□□□□□ -0.32
MTHFD1-208ENST00000554739 A0A1B0GVT2 93 aa13.03□□□□□ -0.32
MTHFD1-208ENST00000554739 A0A1W2PR77 199 aa13.03□□□□□ -0.32
MTHFD1-208ENST00000554739 KCNK1O00180 336 aa13.03□□□□□ -0.32
MTHFD1-208ENST00000554739 SLC30A4O14863 429 aa13.03□□□□□ -0.32
MTHFD1-208ENST00000554739 VILLO15195 856 aa13.03□□□□□ -0.32
MTHFD1-208ENST00000554739 KRT86O43790 486 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms