RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 ARRB1P49407 418 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-213ENST00000554600 ZNF75DP51815 510 aa10.79□□□□□ -0.68
SHMT2-213ENST00000554600 CLDN2P57739 230 aa10.79□□□□□ -0.68
SHMT2-213ENST00000554600 TAS2R40P59535 323 aa10.79□□□□□ -0.68
SHMT2-213ENST00000554600 FAM193AP78312 1265 aa10.79□□□□□ -0.68
SHMT2-213ENST00000554600 HNRNPDQ14103 355 aaKnown RBP10.79□□□□□ -0.68
SHMT2-213ENST00000554600 LBRQ14739 615 aaKnown RBP10.79□□□□□ -0.68
SHMT2-213ENST00000554600 GRM3Q14832 879 aa10.79□□□□□ -0.68
SHMT2-213ENST00000554600 TRIP6Q15654 476 aaKnown RBP10.79□□□□□ -0.68
SHMT2-213ENST00000554600 ZNF423Q2M1K9 1284 aa10.79□□□□□ -0.68
SHMT2-213ENST00000554600 ZNF284Q2VY69 593 aa10.79□□□□□ -0.68
SHMT2-213ENST00000554600 INAVAQ3KP66 663 aa10.79□□□□□ -0.68
SHMT2-213ENST00000554600 CCDC157Q569K6 752 aa10.79□□□□□ -0.68
SHMT2-213ENST00000554600 ODF2Q5BJF6 829 aa10.79□□□□□ -0.68
SHMT2-213ENST00000554600 TMCO4Q5TGY1 634 aa10.79□□□□□ -0.68
SHMT2-213ENST00000554600 AFMIDQ63HM1 303 aa10.79□□□□□ -0.68
SHMT2-213ENST00000554600 PTAR1Q7Z6K3 402 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-213ENST00000554600 GATAD2AQ86YP4 633 aa10.79□□□□□ -0.68
SHMT2-213ENST00000554600 MAP7D3Q8IWC1 876 aa10.79□□□□□ -0.68
SHMT2-213ENST00000554600 RHOT2Q8IXI1 618 aa10.79□□□□□ -0.68
SHMT2-213ENST00000554600 TSEN2Q8NCE0 465 aaKnown RBP10.79□□□□□ -0.68
SHMT2-213ENST00000554600 CXorf40AQ8TE69 158 aa10.79□□□□□ -0.68
SHMT2-213ENST00000554600 ELF4Q99607 663 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-213ENST00000554600 SLC17A9Q9BYT1 436 aa10.79□□□□□ -0.68
SHMT2-213ENST00000554600 CPEB1Q9BZB8 566 aaKnown RBP10.79□□□□□ -0.68
SHMT2-213ENST00000554600 SEPT3Q9UH03 358 aa10.79□□□□□ -0.68
SHMT2-213ENST00000554600 ANGPTL2Q9UKU9 493 aa10.79□□□□□ -0.68
SHMT2-213ENST00000554600 A0A1B0GTQ1 180 aa10.78□□□□□ -0.68
SHMT2-213ENST00000554600 GOLGA8CPA6NN73 597 aa10.78□□□□□ -0.68
SHMT2-213ENST00000554600 C10orf142B7Z368 130 aa10.78□□□□□ -0.68
SHMT2-213ENST00000554600 MMP20O60882 483 aa10.78□□□□□ -0.68
SHMT2-213ENST00000554600 NEBLO76041 1014 aa10.78□□□□□ -0.68
SHMT2-213ENST00000554600 PAK4O96013 591 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-213ENST00000554600 ITGAVP06756 1048 aa10.78□□□□□ -0.68
SHMT2-213ENST00000554600 SERPINA4P29622 427 aa10.78□□□□□ -0.68
SHMT2-213ENST00000554600 NOP2P46087 812 aaKnown RBP10.78□□□□□ -0.68
SHMT2-213ENST00000554600 RGRP47804 291 aa10.78□□□□□ -0.68
SHMT2-213ENST00000554600 SCNN1BP51168 640 aa10.78□□□□□ -0.68
SHMT2-213ENST00000554600 RENBPP51606 427 aa10.78□□□□□ -0.68
SHMT2-213ENST00000554600 NXPH1P58417 271 aa10.78□□□□□ -0.68
SHMT2-213ENST00000554600 BCL2L1Q07817 233 aa10.78□□□□□ -0.68
SHMT2-213ENST00000554600 SLC10A7Q0GE19 358 aa10.78□□□□□ -0.68
SHMT2-213ENST00000554600 OVGP1Q12889 678 aa10.78□□□□□ -0.68
SHMT2-213ENST00000554600 DPYSL3Q14195 570 aa10.78□□□□□ -0.68
SHMT2-213ENST00000554600 RFTN1Q14699 578 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-213ENST00000554600 PDK2Q15119 407 aa10.78□□□□□ -0.68
SHMT2-213ENST00000554600 TMEM259Q4ZIN3 620 aa10.78□□□□□ -0.68
SHMT2-213ENST00000554600 IQCHQ86VS3 1027 aa10.78□□□□□ -0.68
SHMT2-213ENST00000554600 CAMK1DQ8IU85 385 aa10.78□□□□□ -0.68
SHMT2-213ENST00000554600 BBS5Q8N3I7 341 aa10.78□□□□□ -0.68
SHMT2-213ENST00000554600 OXR1Q8N573 874 aa10.78□□□□□ -0.68
SHMT2-213ENST00000554600 TC2NQ8N9U0 490 aa10.78□□□□□ -0.68
SHMT2-213ENST00000554600 RFFLQ8WZ73 363 aa10.78□□□□□ -0.68
SHMT2-213ENST00000554600 TSC1Q92574 1164 aa10.78□□□□□ -0.68
SHMT2-213ENST00000554600 WRAP53Q9BUR4 548 aaKnown RBP10.78□□□□□ -0.68
SHMT2-213ENST00000554600 SUV39H2Q9H5I1 410 aa10.78□□□□□ -0.68
SHMT2-213ENST00000554600 ATP13A3Q9H7F0 1226 aa10.78□□□□□ -0.68
SHMT2-213ENST00000554600 RCOR3Q9P2K3 495 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-213ENST00000554600 PCOLCE2Q9UKZ9 415 aa10.78□□□□□ -0.68
SHMT2-213ENST00000554600 BTBD3Q9Y2F9 522 aa10.78□□□□□ -0.68
SHMT2-213ENST00000554600 PCDHGB2Q9Y5G2 931 aa10.78□□□□□ -0.68
SHMT2-213ENST00000554600 ARHGEF17Q96PE2 2063 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-213ENST00000554600 IGF2RP11717 2491 aa10.78□□□□□ -0.68
SHMT2-213ENST00000554600 PLXNB3Q9ULL4 1909 aa10.78□□□□□ -0.68
SHMT2-213ENST00000554600 ZFC3H1O60293 1989 aaKnown RBP10.77□□□□□ -0.68
SHMT2-213ENST00000554600 USP24Q9UPU5 2620 aa10.77□□□□□ -0.68
SHMT2-213ENST00000554600 COL5A1P20908 1838 aaPredicted RBP10.77□□□□□ -0.68
SHMT2-213ENST00000554600 TTC24A2A3L6 582 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-213ENST00000554600 LRRD1A4D1F6 860 aa10.77□□□□□ -0.69
SHMT2-213ENST00000554600 A6NNZ2 444 aa10.77□□□□□ -0.69
SHMT2-213ENST00000554600 YKT6O15498 198 aa10.77□□□□□ -0.69
SHMT2-213ENST00000554600 SPOPO43791 374 aa10.77□□□□□ -0.69
SHMT2-213ENST00000554600 MFSD11O43934 449 aa10.77□□□□□ -0.69
SHMT2-213ENST00000554600 PCDHGA12O60330 932 aa10.77□□□□□ -0.69
SHMT2-213ENST00000554600 MAP3K6O95382 1288 aa10.77□□□□□ -0.69
SHMT2-213ENST00000554600 KRT1P04264 644 aa10.77□□□□□ -0.69
SHMT2-213ENST00000554600 TIMP2P16035 220 aa10.77□□□□□ -0.69
SHMT2-213ENST00000554600 ITIH2P19823 946 aa10.77□□□□□ -0.69
SHMT2-213ENST00000554600 MAN1A1P33908 653 aa10.77□□□□□ -0.69
SHMT2-213ENST00000554600 CYLC1P35663 651 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-213ENST00000554600 GRK6P43250 576 aa10.77□□□□□ -0.69
SHMT2-213ENST00000554600 MAGEA1P43355 309 aa10.77□□□□□ -0.69
SHMT2-213ENST00000554600 SEMG2Q02383 582 aa10.77□□□□□ -0.69
SHMT2-213ENST00000554600 ITKQ08881 620 aa10.77□□□□□ -0.69
SHMT2-213ENST00000554600 ELP6Q0PNE2 266 aa10.77□□□□□ -0.69
SHMT2-213ENST00000554600 SPA17Q15506 151 aa10.77□□□□□ -0.69
SHMT2-213ENST00000554600 ANKRD20A8PQ5CZ79 823 aa10.77□□□□□ -0.69
SHMT2-213ENST00000554600 ERAP2Q6P179 960 aa10.77□□□□□ -0.69
SHMT2-213ENST00000554600 ZSCAN30Q86W11 494 aa10.77□□□□□ -0.69
SHMT2-213ENST00000554600 SPATS2Q86XZ4 545 aaKnown RBP10.77□□□□□ -0.69
SHMT2-213ENST00000554600 TMEM145Q8NBT3 493 aa10.77□□□□□ -0.69
SHMT2-213ENST00000554600 OR13H1Q8NG92 308 aa10.77□□□□□ -0.69
SHMT2-213ENST00000554600 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-213ENST00000554600 PDCD6IPQ8WUM4 868 aaKnown RBP10.77□□□□□ -0.69
SHMT2-213ENST00000554600 MRFAP1L1Q96HT8 127 aa10.77□□□□□ -0.69
SHMT2-213ENST00000554600 ZNF599Q96NL3 588 aa10.77□□□□□ -0.69
SHMT2-213ENST00000554600 TUBGCP5Q96RT8 1024 aa10.77□□□□□ -0.69
SHMT2-213ENST00000554600 CDC6Q99741 560 aa10.77□□□□□ -0.69
SHMT2-213ENST00000554600 ZNF670Q9BS34 389 aa10.77□□□□□ -0.69
SHMT2-213ENST00000554600 LUC7LQ9NQ29 371 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms