RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 H3BQ06 376 aaPredicted RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 SEC22BO75396 215 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 ALBP02768 609 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 CAV3P56539 151 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 TRAF2Q12933 501 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 ATP13A5Q4VNC0 1218 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 GPR158Q5T848 1215 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 PRPF39Q86UA1 669 aaKnown RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 ARHGEF25Q86VW2 580 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 SGCDQ92629 289 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 UBXN6Q9BZV1 441 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 DEFB129Q9H1M3 183 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 CRISPLD1Q9H336 500 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 BRD9Q9H8M2 597 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 NEDD8-MDP1E9PL57 170 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 SULT1B1O43704 296 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 GAS2O43903 313 aaKnown RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 RNASEH2AO75792 299 aaKnown RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 OASLQ15646 514 aaKnown RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 SV2CQ496J9 727 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 ATAD3BQ5T9A4 648 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 MCOLN3Q8TDD5 553 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 SLC28A3Q9HAS3 691 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 GNG13Q9P2W3 67 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 POLLQ9UGP5 575 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 CYTH4Q9UIA0 394 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 MEX3AA1L020 520 aaKnown RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 LACTBL1A8MY62 500 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 TJP3O95049 919 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 ALPPL2P10696 532 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 RUNX2Q13950 521 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 NFE2Q16621 373 aaPredicted RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 DPF1Q92782 380 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 CAVIN3Q969G5 261 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 SDSLQ96GA7 329 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 C8orf48Q96LL4 319 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 HGH1Q9BTY7 390 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 PDS5AQ29RF7 1337 aaKnown RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 RPAP1Q9BWH6 1393 aaPredicted RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 ZNF839A8K0R7 811 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 IFRD1O00458 451 aaPredicted RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 MT-ND1P03886 318 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 NR4A1P22736 598 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 GRPRP30550 384 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 TNFSF9P41273 254 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 MLLT10P55197 1068 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 MTFR1Q15390 333 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 TRIQKQ629K1 86 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 EEF1DP3Q658K8 133 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 REXO1L1PQ8IX06 675 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 OXR1Q8N573 874 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 FRMD1Q8N878 549 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 ZNF784Q8NCA9 323 aaPredicted RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 GMCL1P1Q8NEA9 526 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 PIH1D2Q8WWB5 315 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 PHOX2BQ99453 314 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 NDNQ99608 321 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 KCNN2Q9H2S1 579 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 RHPN2P1A8MT19 583 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 E7EQ34 232 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 DOK2O60496 412 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 BBOX1O75936 387 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 CALB1P05937 261 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 VIPR2P41587 438 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 CLK3P49761 638 aaKnown RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 ENTPD1P49961 510 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 MNX1P50219 401 aaPredicted RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 NDUFA6P56556 154 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 RPL11P62913 178 aaKnown RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 PTGISQ16647 500 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 ATF7IP2Q5U623 682 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 TSSK4Q6SA08 328 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 HSDL2Q6YN16 418 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 OR2L8Q8NGY9 312 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 TESCQ96BS2 214 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 PANX2Q96RD6 677 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 NOL11Q9H8H0 719 aaKnown RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 C8orf4Q9NR00 106 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 SEC14L5O43304 696 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 SSNA1O43805 119 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 ARHGEF15O94989 841 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 IL33O95760 270 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 HSD17B4P51659 736 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 CBWD6Q4V339 395 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 FAM45BPQ6NSW5 357 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 XKRXQ6PP77 449 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 TMEM68Q96MH6 324 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 IL12RB2Q99665 862 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 EPB41L1Q9H4G0 881 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 ATAD3AQ9NVI7 634 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 DPP3Q9NY33 737 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 DLGAP2Q9P1A6 1054 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 ZNF112Q9UJU3 913 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 CA5BQ9Y2D0 317 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 PTCH1Q13635 1447 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 TBL1XO60907 577 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 ATP5JP18859 108 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 PKNOX1P55347 436 aa3.33□□□□□ -1.88
SYNE2-212ENST00000554584 DCTN2Q13561 401 aaKnown RBP3.33□□□□□ -1.88
SYNE2-212ENST00000554584 CBX2Q14781 532 aaPredicted RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms