RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 MYBL1P10243 752 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 HOXA9P31269 272 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 LSP1P33241 339 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 ALDH1A3P47895 512 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 DAOAP59103 153 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 IL13RA1P78552 427 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 MRPS5P82675 430 aaKnown RBP6.55□□□□□ -1.36
SCFD1-212ENST00000554486 SLC6A3Q01959 620 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 MAMLD1Q13495 774 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 TAF5Q15542 800 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 PPM1LQ5SGD2 360 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 OR6B2Q6IFH4 312 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 TRNP1Q6NT89 227 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 DNAJC24Q6P3W2 148 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 UNQ6494/PRO21346Q6UXR6 183 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 DENND5BQ6ZUT9 1274 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 RTL10Q7L3V2 364 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 SLC26A9Q7LBE3 791 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 DNAJB7Q7Z6W7 309 aaPredicted RBP6.55□□□□□ -1.36
SCFD1-212ENST00000554486 SCD5Q86SK9 330 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 KIAA1328Q86T90 577 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 CCAR2Q8N163 923 aaKnown RBP6.55□□□□□ -1.36
SCFD1-212ENST00000554486 SIX6OS1Q8N1H7 587 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 C3orf20Q8ND61 904 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 JOSD2Q8TAC2 188 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 KIAA1524Q8TCG1 905 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 IPO4Q8TEX9 1081 aaKnown RBP6.55□□□□□ -1.36
SCFD1-212ENST00000554486 CTNNBL1Q8WYA6 563 aaPredicted RBP6.55□□□□□ -1.36
SCFD1-212ENST00000554486 RFFLQ8WZ73 363 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 RELTQ969Z4 430 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 TRIM44Q96DX7 344 aaPredicted RBP6.55□□□□□ -1.36
SCFD1-212ENST00000554486 SCYL1Q96KG9 808 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 FOXB1Q99853 325 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 TRIM7Q9C029 511 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 SYNCQ9H7C4 482 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 NMUR1Q9HB89 426 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 ZNF334Q9HCZ1 680 aaPredicted RBP6.55□□□□□ -1.36
SCFD1-212ENST00000554486 CNGB3Q9NQW8 809 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 COMMD8Q9NX08 183 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 TRMT1Q9NXH9 659 aaKnown RBP6.55□□□□□ -1.36
SCFD1-212ENST00000554486 WDR35Q9P2L0 1181 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 MYO1AQ9UBC5 1043 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 CNOT8Q9UFF9 292 aaKnown RBP6.55□□□□□ -1.36
SCFD1-212ENST00000554486 COG5Q9UP83 839 aa6.55□□□□□ -1.36
SCFD1-212ENST00000554486 A0A0A6YYK5 440 aaPredicted RBP6.54□□□□□ -1.36
SCFD1-212ENST00000554486 SH3D21A4FU49 640 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 TMEM191CA6NGB0 347 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 SIGLEC16A6NMB1 481 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 CCL16O15467 120 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 ULK1O75385 1050 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 KATNA1O75449 491 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 GRAP2O75791 330 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 MTA2O94776 668 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 FYNP06241 537 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 POU2F2P09086 479 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 HNRNPA1P09651 372 aaKnown RBP eCLIP6.54□□□□□ -1.36
SCFD1-212ENST00000554486 ZDHHC11BP0C7U3 371 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 CD40P25942 277 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 YWHAQP27348 245 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 RFC1P35251 1148 aaPredicted RBP6.54□□□□□ -1.36
SCFD1-212ENST00000554486 SNX16P57768 344 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 SESN3P58005 492 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 RPL7AP62424 266 aaKnown RBP6.54□□□□□ -1.36
SCFD1-212ENST00000554486 OGDHQ02218 1023 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 TAF10Q12962 218 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 PLD1Q13393 1074 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 ADAM15Q13444 863 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 VEPH1Q14D04 833 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 FAM102AQ5T9C2 384 aaPredicted RBP6.54□□□□□ -1.36
SCFD1-212ENST00000554486 TMEM184AQ6ZMB5 413 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 GAREM2Q75VX8 874 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 Q7L0L9 218 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 KANSL1Q7Z3B3 1105 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 TMEM150AQ86TG1 271 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 TMC8Q8IU68 726 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 ZDHHC17Q8IUH5 632 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 CBARPQ8N350 705 aaPredicted RBP6.54□□□□□ -1.36
SCFD1-212ENST00000554486 C12orf76Q8N812 135 aaPredicted RBP6.54□□□□□ -1.36
SCFD1-212ENST00000554486 SLC35G2Q8TBE7 412 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 IRGQQ8WZA9 623 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 FBXO32Q969P5 355 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 PPP2R3CQ969Q6 453 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 PSMG2Q969U7 264 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 ZNF707Q96C28 371 aaPredicted RBP6.54□□□□□ -1.36
SCFD1-212ENST00000554486 SLC2A13Q96QE2 648 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 SELENOOQ9BVL4 669 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 NUP85Q9BW27 656 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 POFUT1Q9H488 388 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 FBXO44Q9H4M3 255 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 PARVAQ9NVD7 372 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 ASNSD1Q9NWL6 643 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 HCFC1R1Q9NWW0 138 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 OSER1Q9NX31 292 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 ZDHHC7Q9NXF8 308 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 UVRAGQ9P2Y5 699 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 CROTQ9UKG9 612 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 MAGED2Q9UNF1 606 aaPredicted RBP6.54□□□□□ -1.36
SCFD1-212ENST00000554486 ASB3Q9Y575 518 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 PAXBP1Q9Y5B6 917 aa6.54□□□□□ -1.36
SCFD1-212ENST00000554486 PRUNE2Q8WUY3 3088 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms