RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 TSHRP16473 764 aa11.73□□□□□ -0.53
TUBB3-204ENST00000554116 ADKP55263 362 aaKnown RBP11.73□□□□□ -0.53
TUBB3-204ENST00000554116 GNA12Q03113 381 aa11.73□□□□□ -0.53
TUBB3-204ENST00000554116 UBXN1Q04323 297 aa11.73□□□□□ -0.53
TUBB3-204ENST00000554116 DEUP1Q05D60 604 aa11.73□□□□□ -0.53
TUBB3-204ENST00000554116 SRSF1Q07955 248 aaKnown RBP eCLIP11.73□□□□□ -0.53
TUBB3-204ENST00000554116 SLC20A2Q08357 652 aa11.73□□□□□ -0.53
TUBB3-204ENST00000554116 CCDC15Q0P6D6 951 aa11.73□□□□□ -0.53
TUBB3-204ENST00000554116 SYCP1Q15431 976 aa11.73□□□□□ -0.53
TUBB3-204ENST00000554116 NR0B2Q15466 257 aa11.73□□□□□ -0.53
TUBB3-204ENST00000554116 SLC25A52Q3SY17 297 aa11.73□□□□□ -0.53
TUBB3-204ENST00000554116 ANO6Q4KMQ2 910 aa11.73□□□□□ -0.53
TUBB3-204ENST00000554116 PRRT3Q5FWE3 981 aa11.73□□□□□ -0.53
TUBB3-204ENST00000554116 FAM72AQ5TYM5 149 aa11.73□□□□□ -0.53
TUBB3-204ENST00000554116 MANEALQ5VSG8 457 aa11.73□□□□□ -0.53
TUBB3-204ENST00000554116 FAM72DQ6L9T8 149 aa11.73□□□□□ -0.53
TUBB3-204ENST00000554116 RBM44Q6ZP01 1051 aaKnown RBP11.73□□□□□ -0.53
TUBB3-204ENST00000554116 NLRP14Q86W24 1093 aa11.73□□□□□ -0.53
TUBB3-204ENST00000554116 FAM72BQ86X60 149 aa11.73□□□□□ -0.53
TUBB3-204ENST00000554116 PLPP6Q8IY26 295 aa11.73□□□□□ -0.53
TUBB3-204ENST00000554116 GRAMD1AQ96CP6 724 aa11.73□□□□□ -0.53
TUBB3-204ENST00000554116 CCDC97Q96F63 343 aaPredicted RBP11.73□□□□□ -0.53
TUBB3-204ENST00000554116 ARHGEF17Q96PE2 2063 aaPredicted RBP11.73□□□□□ -0.53
TUBB3-204ENST00000554116 TM6SF2Q9BZW4 377 aa11.73□□□□□ -0.53
TUBB3-204ENST00000554116 ATP13A1Q9HD20 1204 aa11.73□□□□□ -0.53
TUBB3-204ENST00000554116 NLRC4Q9NPP4 1024 aa11.73□□□□□ -0.53
TUBB3-204ENST00000554116 EVA1BQ9NVM1 165 aa11.73□□□□□ -0.53
TUBB3-204ENST00000554116 RRN3Q9NYV6 651 aa11.73□□□□□ -0.53
TUBB3-204ENST00000554116 HECAQ9UBI9 543 aaPredicted RBP11.73□□□□□ -0.53
TUBB3-204ENST00000554116 SIK3Q9Y2K2 1263 aa11.73□□□□□ -0.53
TUBB3-204ENST00000554116 SMTNL1A8MU46 457 aa11.72□□□□□ -0.53
TUBB3-204ENST00000554116 LGALS16A8MUM7 142 aa11.72□□□□□ -0.53
TUBB3-204ENST00000554116 FPGTO14772 594 aa11.72□□□□□ -0.53
TUBB3-204ENST00000554116 EPHB6O15197 1021 aa11.72□□□□□ -0.53
TUBB3-204ENST00000554116 TSPAN6O43657 245 aa11.72□□□□□ -0.53
TUBB3-204ENST00000554116 TCEA3O75764 348 aa11.72□□□□□ -0.53
TUBB3-204ENST00000554116 GFPT2O94808 682 aa11.72□□□□□ -0.53
TUBB3-204ENST00000554116 TNFSF15O95150 251 aa11.72□□□□□ -0.53
TUBB3-204ENST00000554116 NTRK1P04629 796 aa11.72□□□□□ -0.53
TUBB3-204ENST00000554116 MMEP08473 750 aa11.72□□□□□ -0.53
TUBB3-204ENST00000554116 RBMS1P29558 406 aaKnown RBP11.72□□□□□ -0.53
TUBB3-204ENST00000554116 DNA2P51530 1060 aa11.72□□□□□ -0.53
TUBB3-204ENST00000554116 TGIF1Q15583 401 aa11.72□□□□□ -0.53
TUBB3-204ENST00000554116 LRRC73Q5JTD7 316 aa11.72□□□□□ -0.53
TUBB3-204ENST00000554116 C6orf132Q5T0Z8 1188 aa11.72□□□□□ -0.53
TUBB3-204ENST00000554116 FOXR1Q6PIV2 292 aa11.72□□□□□ -0.53
TUBB3-204ENST00000554116 ZNF783Q6ZMS7 281 aa11.72□□□□□ -0.53
TUBB3-204ENST00000554116 LEKR1Q6ZMV7 388 aa11.72□□□□□ -0.53
TUBB3-204ENST00000554116 NOP9Q86U38 636 aaKnown RBP11.72□□□□□ -0.53
TUBB3-204ENST00000554116 FAM131BQ86XD5 332 aa11.72□□□□□ -0.53
TUBB3-204ENST00000554116 ZDHHC17Q8IUH5 632 aa11.72□□□□□ -0.53
TUBB3-204ENST00000554116 DRC7Q8IY82 874 aa11.72□□□□□ -0.53
TUBB3-204ENST00000554116 PHACTR4Q8IZ21 702 aa11.72□□□□□ -0.53
TUBB3-204ENST00000554116 TP53I13Q8NBR0 393 aaPredicted RBP11.72□□□□□ -0.53
TUBB3-204ENST00000554116 NETO2Q8NC67 525 aa11.72□□□□□ -0.53
TUBB3-204ENST00000554116 DENND6BQ8NEG7 585 aa11.72□□□□□ -0.53
TUBB3-204ENST00000554116 NEK11Q8NG66 645 aa11.72□□□□□ -0.53
TUBB3-204ENST00000554116 WDR36Q8NI36 951 aaKnown RBP11.72□□□□□ -0.53
TUBB3-204ENST00000554116 ISG20Q96AZ6 181 aaKnown RBP11.72□□□□□ -0.53
TUBB3-204ENST00000554116 C18orf8Q96DM3 657 aa11.72□□□□□ -0.53
TUBB3-204ENST00000554116 PPP1R16AQ96I34 528 aa11.72□□□□□ -0.53
TUBB3-204ENST00000554116 HAPLN3Q96S86 360 aa11.72□□□□□ -0.53
TUBB3-204ENST00000554116 CCDC3Q9BQI4 270 aa11.72□□□□□ -0.53
TUBB3-204ENST00000554116 FAM117AQ9C073 453 aa11.72□□□□□ -0.53
TUBB3-204ENST00000554116 HSD3B7Q9H2F3 369 aa11.72□□□□□ -0.53
TUBB3-204ENST00000554116 NOL6Q9H6R4 1146 aaKnown RBP11.72□□□□□ -0.53
TUBB3-204ENST00000554116 ZDHHC6Q9H6R6 413 aa11.72□□□□□ -0.53
TUBB3-204ENST00000554116 IL17BQ9UHF5 180 aa11.72□□□□□ -0.53
TUBB3-204ENST00000554116 DAAM1Q9Y4D1 1078 aa11.72□□□□□ -0.53
TUBB3-204ENST00000554116 ANKRD36A6QL64 1941 aa11.71□□□□□ -0.53
TUBB3-204ENST00000554116 A0A1W2PQM1 296 aa11.71□□□□□ -0.53
TUBB3-204ENST00000554116 H3BM21 787 aa11.71□□□□□ -0.53
TUBB3-204ENST00000554116 LSM8O95777 96 aaKnown RBP11.71□□□□□ -0.53
TUBB3-204ENST00000554116 F9P00740 461 aa11.71□□□□□ -0.53
TUBB3-204ENST00000554116 ATP1A3P13637 1013 aa11.71□□□□□ -0.53
TUBB3-204ENST00000554116 ITGB6P18564 788 aa11.71□□□□□ -0.53
TUBB3-204ENST00000554116 WT1P19544 449 aaPredicted RBP11.71□□□□□ -0.53
TUBB3-204ENST00000554116 SOX5P35711 763 aa11.71□□□□□ -0.53
TUBB3-204ENST00000554116 SCNN1AP37088 669 aa11.71□□□□□ -0.53
TUBB3-204ENST00000554116 STAT1P42224 750 aa11.71□□□□□ -0.53
TUBB3-204ENST00000554116 RECQLP46063 649 aaPredicted RBP11.71□□□□□ -0.53
TUBB3-204ENST00000554116 JAM2P57087 298 aa11.71□□□□□ -0.53
TUBB3-204ENST00000554116 ZNF805Q5CZA5 627 aa11.71□□□□□ -0.53
TUBB3-204ENST00000554116 RETSATQ6NUM9 610 aa11.71□□□□□ -0.53
TUBB3-204ENST00000554116 LRRC31Q6UY01 552 aa11.71□□□□□ -0.53
TUBB3-204ENST00000554116 APTXQ7Z2E3 356 aaKnown RBP11.71□□□□□ -0.53
TUBB3-204ENST00000554116 ZNF677Q86XU0 584 aa11.71□□□□□ -0.53
TUBB3-204ENST00000554116 SFTPA2Q8IWL1 248 aa11.71□□□□□ -0.53
TUBB3-204ENST00000554116 TPCN2Q8NHX9 752 aa11.71□□□□□ -0.53
TUBB3-204ENST00000554116 EPS8L1Q8TE68 723 aa11.71□□□□□ -0.53
TUBB3-204ENST00000554116 CPA5Q8WXQ8 436 aa11.71□□□□□ -0.53
TUBB3-204ENST00000554116 ARHGEF2Q92974 986 aaKnown RBP11.71□□□□□ -0.53
TUBB3-204ENST00000554116 TBATAQ96M53 351 aa11.71□□□□□ -0.53
TUBB3-204ENST00000554116 CFAP57Q96MR6 1250 aa11.71□□□□□ -0.53
TUBB3-204ENST00000554116 KLHL32Q96NJ5 620 aa11.71□□□□□ -0.53
TUBB3-204ENST00000554116 IL12RB2Q99665 862 aa11.71□□□□□ -0.53
TUBB3-204ENST00000554116 BPIFA3Q9BQP9 254 aa11.71□□□□□ -0.53
TUBB3-204ENST00000554116 ZYG11BQ9C0D3 744 aa11.71□□□□□ -0.53
TUBB3-204ENST00000554116 KLC2Q9H0B6 622 aa11.71□□□□□ -0.53
TUBB3-204ENST00000554116 NCKIPSDQ9NZQ3 722 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms