RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 LETMD1Q6P1Q0 360 aa7.06□□□□□ -1.28
ATXN3-224ENST00000554040 GUSBP11Q6P575 273 aa7.06□□□□□ -1.28
ATXN3-224ENST00000554040 STXBP4Q6ZWJ1 553 aa7.06□□□□□ -1.28
ATXN3-224ENST00000554040 EFL1Q7Z2Z2 1120 aaKnown RBP7.06□□□□□ -1.28
ATXN3-224ENST00000554040 FBXO39Q8N4B4 442 aa7.06□□□□□ -1.28
ATXN3-224ENST00000554040 XXYLT1Q8NBI6 393 aa7.06□□□□□ -1.28
ATXN3-224ENST00000554040 BHLHE22Q8NFJ8 381 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-224ENST00000554040 PTPRN2Q92932 1015 aa7.06□□□□□ -1.28
ATXN3-224ENST00000554040 TWNKQ96RR1 684 aa7.06□□□□□ -1.28
ATXN3-224ENST00000554040 UBXN6Q9BZV1 441 aa7.06□□□□□ -1.28
ATXN3-224ENST00000554040 AGPAT3Q9NRZ7 376 aa7.06□□□□□ -1.28
ATXN3-224ENST00000554040 PLEKHB1Q9UF11 243 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-224ENST00000554040 SLCO3A1Q9UIG8 710 aa7.06□□□□□ -1.28
ATXN3-224ENST00000554040 ANAPC2Q9UJX6 822 aa7.06□□□□□ -1.28
ATXN3-224ENST00000554040 ERVW-1Q9UQF0 538 aa7.06□□□□□ -1.28
ATXN3-224ENST00000554040 HBS1LQ9Y450 684 aaKnown RBP7.06□□□□□ -1.28
ATXN3-224ENST00000554040 ITIH6Q6UXX5 1313 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 GOLGA6L7A0A1B0GV03 622 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 H3BS24 57 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 PLD2O14939 933 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 CLIC2O15247 247 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 NVLO15381 856 aaKnown RBP7.05□□□□□ -1.28
ATXN3-224ENST00000554040 SLC31A1O15431 190 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 TGFB1I1O43294 461 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 VNN1O95497 513 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 LIPCP11150 499 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 UGT1A5P35504 534 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 CASP4P49662 377 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 CYP2J2P51589 502 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 PDX1P52945 283 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 METAP1P53582 386 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 RIPPLY3P57055 190 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 HNRNPKP61978 463 aaKnown RBP eCLIP7.05□□□□□ -1.28
ATXN3-224ENST00000554040 SNRPFP62306 86 aaKnown RBP7.05□□□□□ -1.28
ATXN3-224ENST00000554040 CYP4F2P78329 520 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 EIF3IQ13347 325 aaKnown RBP7.05□□□□□ -1.28
ATXN3-224ENST00000554040 ELAVL3Q14576 367 aaKnown RBP7.05□□□□□ -1.28
ATXN3-224ENST00000554040 SGSM1Q2NKQ1 1148 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 FBLN7Q53RD9 439 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 ZNF542PQ5EBM4 170 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 RAB41Q5JT25 222 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 PRAMEF13Q5VWM6 474 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 FAM46CQ5VWP2 391 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 ZCCHC8Q6NZY4 707 aaKnown RBP7.05□□□□□ -1.28
ATXN3-224ENST00000554040 RFWD3Q6PCD5 774 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 CRTC1Q6UUV9 634 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 DSG4Q86SJ6 1040 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 JAMLQ86YT9 394 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 HID1Q8IV36 788 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 MFN1Q8IWA4 741 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 CCDC65Q8IXS2 484 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 WDR48Q8TAF3 677 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 PLEKHO2Q8TD55 490 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 HTR3CQ8WXA8 447 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 FUCA2Q9BTY2 467 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 NT5C1AQ9BXI3 368 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 CALN1Q9BXU9 219 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 OLA1Q9NTK5 396 aaKnown RBP7.05□□□□□ -1.28
ATXN3-224ENST00000554040 SEPT10Q9P0V9 454 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 SFMBT1Q9UHJ3 866 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 CSNK1G3Q9Y6M4 447 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 FBN2P35556 2912 aa7.05□□□□□ -1.28
ATXN3-224ENST00000554040 UBE4BO95155 1302 aa7.04□□□□□ -1.28
ATXN3-224ENST00000554040 TDRD6O60522 2096 aaKnown RBP7.04□□□□□ -1.28
ATXN3-224ENST00000554040 NTN3O00634 580 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-224ENST00000554040 CASC3O15234 703 aaKnown RBP7.04□□□□□ -1.28
ATXN3-224ENST00000554040 EIF3DO15371 548 aaKnown RBP eCLIP7.04□□□□□ -1.28
ATXN3-224ENST00000554040 IRAK2O43187 625 aa7.04□□□□□ -1.28
ATXN3-224ENST00000554040 ZBED1O96006 694 aa7.04□□□□□ -1.28
ATXN3-224ENST00000554040 CSF2P04141 144 aa7.04□□□□□ -1.28
ATXN3-224ENST00000554040 KRT1P04264 644 aa7.04□□□□□ -1.28
ATXN3-224ENST00000554040 RPN1P04843 607 aaKnown RBP7.04□□□□□ -1.28
ATXN3-224ENST00000554040 WT1P19544 449 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-224ENST00000554040 AKT2P31751 481 aa7.04□□□□□ -1.28
ATXN3-224ENST00000554040 ETF1P62495 437 aaKnown RBP7.04□□□□□ -1.28
ATXN3-224ENST00000554040 ECT2LQ008S8 904 aa7.04□□□□□ -1.28
ATXN3-224ENST00000554040 INCA1Q0VD86 236 aa7.04□□□□□ -1.28
ATXN3-224ENST00000554040 SEPT6Q14141 434 aa7.04□□□□□ -1.28
ATXN3-224ENST00000554040 NR0B2Q15466 257 aa7.04□□□□□ -1.28
ATXN3-224ENST00000554040 FAM133BQ5BKY9 247 aaKnown RBP7.04□□□□□ -1.28
ATXN3-224ENST00000554040 FSCBQ5H9T9 825 aa7.04□□□□□ -1.28
ATXN3-224ENST00000554040 AGBL4Q5VU57 503 aa7.04□□□□□ -1.28
ATXN3-224ENST00000554040 PM20D1Q6GTS8 502 aa7.04□□□□□ -1.28
ATXN3-224ENST00000554040 Q6ZSR6 202 aa7.04□□□□□ -1.28
ATXN3-224ENST00000554040 RAB11FIP2Q7L804 512 aa7.04□□□□□ -1.28
ATXN3-224ENST00000554040 VASH2Q86V25 355 aa7.04□□□□□ -1.28
ATXN3-224ENST00000554040 DCP2Q8IU60 420 aaKnown RBP7.04□□□□□ -1.28
ATXN3-224ENST00000554040 SLC22A18ASQ8N1D0 253 aa7.04□□□□□ -1.28
ATXN3-224ENST00000554040 ZNF548Q8NEK5 533 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-224ENST00000554040 SPATA20Q8TB22 786 aa7.04□□□□□ -1.28
ATXN3-224ENST00000554040 NDRG1Q92597 394 aaKnown RBP7.04□□□□□ -1.28
ATXN3-224ENST00000554040 TAF4BQ92750 862 aa7.04□□□□□ -1.28
ATXN3-224ENST00000554040 KLK6Q92876 244 aa7.04□□□□□ -1.28
ATXN3-224ENST00000554040 RPL10LQ96L21 214 aaKnown RBP7.04□□□□□ -1.28
ATXN3-224ENST00000554040 NOX5Q96PH1 765 aa7.04□□□□□ -1.28
ATXN3-224ENST00000554040 SPAG5Q96R06 1193 aa7.04□□□□□ -1.28
ATXN3-224ENST00000554040 PREBQ9HCU5 417 aa7.04□□□□□ -1.28
ATXN3-224ENST00000554040 DNAJC28Q9NX36 388 aa7.04□□□□□ -1.28
ATXN3-224ENST00000554040 FAM53CQ9NYF3 392 aa7.04□□□□□ -1.28
ATXN3-224ENST00000554040 TUBD1Q9UJT1 453 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms