RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 SLC22A18ASQ8N1D0 253 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 CFAP52Q8N1V2 620 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 ARL14Q8N4G2 192 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 OR13H1Q8NG92 308 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 WDR36Q8NI36 951 aaKnown RBP7.88□□□□□ -1.15
ABCD4-220ENST00000553998 JOSD2Q8TAC2 188 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 WDR48Q8TAF3 677 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 RXFP2Q8WXD0 754 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 OR8D1Q8WZ84 308 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 CENPIQ92674 756 aaPredicted RBP7.88□□□□□ -1.15
ABCD4-220ENST00000553998 ALG14Q96F25 216 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 ATXN7L3BQ96GX2 97 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 BMFQ96LC9 184 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 MCEEQ96PE7 176 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 CNPY3Q9BT09 278 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 OSBPL2Q9H1P3 480 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 FAM204AQ9H8W3 233 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.88□□□□□ -1.15
ABCD4-220ENST00000553998 DDIT4Q9NX09 232 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 ANKMY1Q9P2S6 941 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 SLC12A6Q9UHW9 1150 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 PCDHGA7Q9Y5G6 932 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 HEMK1Q9Y5R4 338 aaPredicted RBP7.88□□□□□ -1.15
ABCD4-220ENST00000553998 DOCK9Q9BZ29 2069 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 MYLKQ15746 1914 aa7.88□□□□□ -1.15
ABCD4-220ENST00000553998 TLN1Q9Y490 2541 aaKnown RBP7.87□□□□□ -1.15
ABCD4-220ENST00000553998 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.87□□□□□ -1.15
ABCD4-220ENST00000553998 A0A0A6YYK5 440 aaPredicted RBP7.87□□□□□ -1.15
ABCD4-220ENST00000553998 SPTY2D1-AS1A0A0U1RR47 76 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 A0A1W2PQU0 124 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 FAM170AA1A519 330 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 CLEC18AA5D8T8 446 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 C1QTNF3-AMACRE9PGA6 284 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 M0QYT0 321 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 TPP1O14773 563 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 MTA2O94776 668 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 CSF2P04141 144 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 ITGA2BP08514 1039 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 NME1P15531 152 aaKnown RBP7.87□□□□□ -1.15
ABCD4-220ENST00000553998 TACR2P21452 398 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 HNRNPA2B1P22626 353 aaKnown RBP7.87□□□□□ -1.15
ABCD4-220ENST00000553998 AKT2P31751 481 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 CXCR3P49682 368 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 PDX1P52945 283 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 OXCT1P55809 520 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 RPL7AP62424 266 aaKnown RBP7.87□□□□□ -1.15
ABCD4-220ENST00000553998 DEUP1Q05D60 604 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 CCDC15Q0P6D6 951 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 ZNF177Q13360 481 aaPredicted RBP7.87□□□□□ -1.15
ABCD4-220ENST00000553998 CCDC14Q49A88 953 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 TMEM259Q4ZIN3 620 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 OTUD1Q5VV17 481 aaPredicted RBP7.87□□□□□ -1.15
ABCD4-220ENST00000553998 TRNP1Q6NT89 227 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 CLEC18BQ6UXF7 455 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 GCNT7Q6ZNI0 430 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 RBM44Q6ZP01 1051 aaKnown RBP7.87□□□□□ -1.15
ABCD4-220ENST00000553998 PHLDB2Q86SQ0 1253 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 DNAAF5Q86Y56 855 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 EMC1Q8N766 993 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 ATP6V0D2Q8N8Y2 350 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 CLEC18CQ8NCF0 446 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 TMIEQ8NEW7 156 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 SGF29Q96ES7 293 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 BTN2A3PQ96KV6 586 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 CALR3Q96L12 384 aaKnown RBP7.87□□□□□ -1.15
ABCD4-220ENST00000553998 CFAP57Q96MR6 1250 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 TBCBQ99426 244 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 PRMT1Q99873 361 aaKnown RBP7.87□□□□□ -1.15
ABCD4-220ENST00000553998 NUP85Q9BW27 656 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 PACSIN1Q9BY11 444 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 CAAP1Q9H8G2 361 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 CTTNBP2NLQ9P2B4 639 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 MYO1AQ9UBC5 1043 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 IP6K2Q9UHH9 426 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 XPO7Q9UIA9 1087 aaKnown RBP7.87□□□□□ -1.15
ABCD4-220ENST00000553998 PCDHA13Q9Y5I0 950 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 OR51B4Q9Y5P0 310 aa7.87□□□□□ -1.15
ABCD4-220ENST00000553998 CCDC187A0A096LP49 1063 aa7.86□□□□□ -1.15
ABCD4-220ENST00000553998 PMS2P1A4D2B8 440 aa7.86□□□□□ -1.15
ABCD4-220ENST00000553998 BTNL10A8MVZ5 291 aa7.86□□□□□ -1.15
ABCD4-220ENST00000553998 KCNU1A8MYU2 1149 aa7.86□□□□□ -1.15
ABCD4-220ENST00000553998 MYO1FO00160 1098 aa7.86□□□□□ -1.15
ABCD4-220ENST00000553998 NTN3O00634 580 aaPredicted RBP7.86□□□□□ -1.15
ABCD4-220ENST00000553998 SLC31A1O15431 190 aa7.86□□□□□ -1.15
ABCD4-220ENST00000553998 ATMINO43313 823 aaPredicted RBP7.86□□□□□ -1.15
ABCD4-220ENST00000553998 NEBLO76041 1014 aa7.86□□□□□ -1.15
ABCD4-220ENST00000553998 TNFSF15O95150 251 aa7.86□□□□□ -1.15
ABCD4-220ENST00000553998 GJB6O95452 261 aa7.86□□□□□ -1.15
ABCD4-220ENST00000553998 PTMAP06454 111 aaKnown RBP7.86□□□□□ -1.15
ABCD4-220ENST00000553998 GP1BBP13224 206 aa7.86□□□□□ -1.15
ABCD4-220ENST00000553998 PSMA2P25787 234 aa7.86□□□□□ -1.15
ABCD4-220ENST00000553998 PCK1P35558 622 aa7.86□□□□□ -1.15
ABCD4-220ENST00000553998 VAV2P52735 878 aa7.86□□□□□ -1.15
ABCD4-220ENST00000553998 AIF1P55008 147 aa7.86□□□□□ -1.15
ABCD4-220ENST00000553998 HADHBP55084 474 aaKnown RBP7.86□□□□□ -1.15
ABCD4-220ENST00000553998 PITX1P78337 314 aaPredicted RBP7.86□□□□□ -1.15
ABCD4-220ENST00000553998 ATP11AP98196 1134 aa7.86□□□□□ -1.15
ABCD4-220ENST00000553998 NME3Q13232 169 aa7.86□□□□□ -1.15
ABCD4-220ENST00000553998 EIF3IQ13347 325 aaKnown RBP7.86□□□□□ -1.15
ABCD4-220ENST00000553998 FZD2Q14332 565 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms