RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 DKK3Q9UBP4 350 aa23.53■■□□□ 1.36
NEK9-203ENST00000553945 A0A1B0GVT2 93 aa23.52■■□□□ 1.36
NEK9-203ENST00000553945 TTC24A2A3L6 582 aaPredicted RBP23.52■■□□□ 1.36
NEK9-203ENST00000553945 GRID2IPA4D2P6 1211 aa23.52■■□□□ 1.36
NEK9-203ENST00000553945 C4orf47A7E2U8 309 aa23.52■■□□□ 1.36
NEK9-203ENST00000553945 NEMP1O14524 444 aa23.52■■□□□ 1.36
NEK9-203ENST00000553945 CDX4O14627 284 aaPredicted RBP23.52■■□□□ 1.36
NEK9-203ENST00000553945 AP1G1O43747 822 aa23.52■■□□□ 1.36
NEK9-203ENST00000553945 ZRANB2O95218 330 aaKnown RBP eCLIP23.52■■□□□ 1.36
NEK9-203ENST00000553945 CCNCP24863 283 aa23.52■■□□□ 1.36
NEK9-203ENST00000553945 SERPINA4P29622 427 aa23.52■■□□□ 1.36
NEK9-203ENST00000553945 HSPA9P38646 679 aaKnown RBP23.52■■□□□ 1.36
NEK9-203ENST00000553945 CDKN2BP42772 138 aa23.52■■□□□ 1.36
NEK9-203ENST00000553945 RACK1P63244 317 aaKnown RBP23.52■■□□□ 1.36
NEK9-203ENST00000553945 LLGL1Q15334 1064 aa23.52■■□□□ 1.36
NEK9-203ENST00000553945 SETMARQ53H47 684 aaPredicted RBP23.52■■□□□ 1.36
NEK9-203ENST00000553945 LRRC73Q5JTD7 316 aa23.52■■□□□ 1.36
NEK9-203ENST00000553945 LAYNQ6UX15 382 aa23.52■■□□□ 1.36
NEK9-203ENST00000553945 NPNTQ6UXI9 565 aa23.52■■□□□ 1.36
NEK9-203ENST00000553945 HORMAD1Q86X24 394 aa23.52■■□□□ 1.36
NEK9-203ENST00000553945 CAMK1DQ8IU85 385 aa23.52■■□□□ 1.36
NEK9-203ENST00000553945 CCDC50Q8IVM0 306 aa23.52■■□□□ 1.36
NEK9-203ENST00000553945 RCOR2Q8IZ40 523 aa23.52■■□□□ 1.36
NEK9-203ENST00000553945 PAF1Q8N7H5 531 aa23.52■■□□□ 1.36
NEK9-203ENST00000553945 ZNF641Q96N77 438 aaPredicted RBP23.52■■□□□ 1.36
NEK9-203ENST00000553945 TSGA13Q96PP4 275 aa23.52■■□□□ 1.36
NEK9-203ENST00000553945 ITM2BQ9Y287 266 aa23.52■■□□□ 1.36
NEK9-203ENST00000553945 ADGRG1Q9Y653 693 aa23.52■■□□□ 1.36
NEK9-203ENST00000553945 SLC30A4O14863 429 aa23.51■■□□□ 1.35
NEK9-203ENST00000553945 MATN3O15232 486 aa23.51■■□□□ 1.35
NEK9-203ENST00000553945 ARHGAP6O43182 974 aa23.51■■□□□ 1.35
NEK9-203ENST00000553945 KRT10P13645 584 aa23.51■■□□□ 1.35
NEK9-203ENST00000553945 TIMP2P16035 220 aa23.51■■□□□ 1.35
NEK9-203ENST00000553945 XPAP23025 273 aaPredicted RBP23.51■■□□□ 1.35
NEK9-203ENST00000553945 NUDT1P36639 197 aa23.51■■□□□ 1.35
NEK9-203ENST00000553945 GRIA4P48058 902 aa23.51■■□□□ 1.35
NEK9-203ENST00000553945 MAXP61244 160 aa23.51■■□□□ 1.35
NEK9-203ENST00000553945 AP1S1P61966 158 aa23.51■■□□□ 1.35
NEK9-203ENST00000553945 BCL2L1Q07817 233 aa23.51■■□□□ 1.35
NEK9-203ENST00000553945 HNRNPDQ14103 355 aaKnown RBP23.51■■□□□ 1.35
NEK9-203ENST00000553945 TFDP2Q14188 446 aa23.51■■□□□ 1.35
NEK9-203ENST00000553945 TAZQ16635 292 aa23.51■■□□□ 1.35
NEK9-203ENST00000553945 ZNF284Q2VY69 593 aa23.51■■□□□ 1.35
NEK9-203ENST00000553945 KAZNQ674X7 775 aa23.51■■□□□ 1.35
NEK9-203ENST00000553945 SEL1L3Q68CR1 1132 aa23.51■■□□□ 1.35
NEK9-203ENST00000553945 LRRC8AQ8IWT6 810 aa23.51■■□□□ 1.35
NEK9-203ENST00000553945 TEX26Q8N6G2 289 aa23.51■■□□□ 1.35
NEK9-203ENST00000553945 OR2I1PQ8NGU4 316 aa23.51■■□□□ 1.35
NEK9-203ENST00000553945 HDAC11Q96DB2 347 aa23.51■■□□□ 1.35
NEK9-203ENST00000553945 FEM1CQ96JP0 617 aa23.51■■□□□ 1.35
NEK9-203ENST00000553945 ZDHHC5Q9C0B5 715 aa23.51■■□□□ 1.35
NEK9-203ENST00000553945 NT5MQ9NPB1 228 aa23.51■■□□□ 1.35
NEK9-203ENST00000553945 SCUBE2Q9NQ36 999 aa23.51■■□□□ 1.35
NEK9-203ENST00000553945 DLL3Q9NYJ7 618 aa23.51■■□□□ 1.35
NEK9-203ENST00000553945 ZFR2Q9UPR6 939 aaKnown RBP23.51■■□□□ 1.35
NEK9-203ENST00000553945 DMTF1Q9Y222 760 aa23.51■■□□□ 1.35
NEK9-203ENST00000553945 ANKRD36A6QL64 1941 aa23.51■■□□□ 1.35
NEK9-203ENST00000553945 WNT9AO14904 365 aa23.5■■□□□ 1.35
NEK9-203ENST00000553945 SLC31A1O15431 190 aa23.5■■□□□ 1.35
NEK9-203ENST00000553945 PRLRP16471 622 aa23.5■■□□□ 1.35
NEK9-203ENST00000553945 CTNNA1P35221 906 aaKnown RBP23.5■■□□□ 1.35
NEK9-203ENST00000553945 RPS21P63220 83 aaKnown RBP23.5■■□□□ 1.35
NEK9-203ENST00000553945 UAP1L1Q3KQV9 507 aa23.5■■□□□ 1.35
NEK9-203ENST00000553945 NAPEPLDQ6IQ20 393 aa23.5■■□□□ 1.35
NEK9-203ENST00000553945 MINDY1Q8N5J2 469 aa23.5■■□□□ 1.35
NEK9-203ENST00000553945 LRRC57Q8N9N7 239 aa23.5■■□□□ 1.35
NEK9-203ENST00000553945 EXD1Q8NHP7 514 aa23.5■■□□□ 1.35
NEK9-203ENST00000553945 HCAR2Q8TDS4 363 aa23.5■■□□□ 1.35
NEK9-203ENST00000553945 MAML1Q92585 1016 aa23.5■■□□□ 1.35
NEK9-203ENST00000553945 FATE1Q969F0 183 aa23.5■■□□□ 1.35
NEK9-203ENST00000553945 RBM41Q96IZ5 413 aaKnown RBP23.5■■□□□ 1.35
NEK9-203ENST00000553945 NUDCD1Q96RS6 583 aa23.5■■□□□ 1.35
NEK9-203ENST00000553945 MGME1Q9BQP7 344 aa23.5■■□□□ 1.35
NEK9-203ENST00000553945 GGT7Q9UJ14 662 aa23.5■■□□□ 1.35
NEK9-203ENST00000553945 PCDHA3Q9Y5H8 950 aa23.5■■□□□ 1.35
NEK9-203ENST00000553945 DNAH14Q0VDD8 3507 aa23.49■■□□□ 1.35
NEK9-203ENST00000553945 DCHS1Q96JQ0 3298 aa23.49■■□□□ 1.35
NEK9-203ENST00000553945 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.49■■□□□ 1.35
NEK9-203ENST00000553945 TSPAN6O43657 245 aa23.49■■□□□ 1.35
NEK9-203ENST00000553945 CST8O60676 142 aa23.49■■□□□ 1.35
NEK9-203ENST00000553945 NEBLO76041 1014 aa23.49■■□□□ 1.35
NEK9-203ENST00000553945 ITIH2P19823 946 aa23.49■■□□□ 1.35
NEK9-203ENST00000553945 BNC1Q01954 994 aa23.49■■□□□ 1.35
NEK9-203ENST00000553945 ITKQ08881 620 aa23.49■■□□□ 1.35
NEK9-203ENST00000553945 PUM1Q14671 1186 aaKnown RBP eCLIP23.49■■□□□ 1.35
NEK9-203ENST00000553945 TMEM259Q4ZIN3 620 aa23.49■■□□□ 1.35
NEK9-203ENST00000553945 TFDP3Q5H9I0 405 aa23.49■■□□□ 1.35
NEK9-203ENST00000553945 KIAA1161Q6NSJ0 714 aa23.49■■□□□ 1.35
NEK9-203ENST00000553945 CCDC13Q8IYE1 715 aa23.49■■□□□ 1.35
NEK9-203ENST00000553945 NSMCE3Q96MG7 304 aa23.49■■□□□ 1.35
NEK9-203ENST00000553945 LGMNQ99538 433 aa23.49■■□□□ 1.35
NEK9-203ENST00000553945 MYOCQ99972 504 aa23.49■■□□□ 1.35
NEK9-203ENST00000553945 RTKNQ9BST9 563 aa23.49■■□□□ 1.35
NEK9-203ENST00000553945 NOD2Q9HC29 1040 aa23.49■■□□□ 1.35
NEK9-203ENST00000553945 RBM22Q9NW64 420 aaKnown RBP eCLIP23.49■■□□□ 1.35
NEK9-203ENST00000553945 ANKRD6Q9Y2G4 727 aa23.49■■□□□ 1.35
NEK9-203ENST00000553945 TSPAN11A1L157 253 aa23.48■■□□□ 1.35
NEK9-203ENST00000553945 PRAMEF26H0Y7S4 382 aa23.48■■□□□ 1.35
NEK9-203ENST00000553945 AREL1O15033 823 aa23.48■■□□□ 1.35
NEK9-203ENST00000553945 SPINT1O43278 529 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms