RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 LUC7LQ9NQ29 371 aaKnown RBP20.6■□□□□ 0.89
FOXA1-203ENST00000553751 REXO2Q9Y3B8 237 aaKnown RBP20.6■□□□□ 0.89
FOXA1-203ENST00000553751 ZNF487B1APH4 448 aa20.59■□□□□ 0.89
FOXA1-203ENST00000553751 H0Y8X5 98 aa20.59■□□□□ 0.89
FOXA1-203ENST00000553751 GIPC1O14908 333 aa20.59■□□□□ 0.89
FOXA1-203ENST00000553751 SLC31A1O15431 190 aa20.59■□□□□ 0.89
FOXA1-203ENST00000553751 TIMP2P16035 220 aa20.59■□□□□ 0.89
FOXA1-203ENST00000553751 KCNA4P22459 653 aa20.59■□□□□ 0.89
FOXA1-203ENST00000553751 GARSP41250 739 aaKnown RBP20.59■□□□□ 0.89
FOXA1-203ENST00000553751 NOP2P46087 812 aaKnown RBP20.59■□□□□ 0.89
FOXA1-203ENST00000553751 NOVA1P51513 510 aaKnown RBP20.59■□□□□ 0.89
FOXA1-203ENST00000553751 RENBPP51606 427 aa20.59■□□□□ 0.89
FOXA1-203ENST00000553751 NXPH1P58417 271 aa20.59■□□□□ 0.89
FOXA1-203ENST00000553751 FOXK2Q01167 660 aa20.59■□□□□ 0.89
FOXA1-203ENST00000553751 FGL2Q14314 439 aa20.59■□□□□ 0.89
FOXA1-203ENST00000553751 ZNF235Q14590 738 aa20.59■□□□□ 0.89
FOXA1-203ENST00000553751 SLC45A4Q5BKX6 768 aa20.59■□□□□ 0.89
FOXA1-203ENST00000553751 PSAPL1Q6NUJ1 521 aa20.59■□□□□ 0.89
FOXA1-203ENST00000553751 IQCHQ86VS3 1027 aa20.59■□□□□ 0.89
FOXA1-203ENST00000553751 VSIG1Q86XK7 387 aa20.59■□□□□ 0.89
FOXA1-203ENST00000553751 CAMK1DQ8IU85 385 aa20.59■□□□□ 0.89
FOXA1-203ENST00000553751 LRRC49Q8IUZ0 686 aa20.59■□□□□ 0.89
FOXA1-203ENST00000553751 RHOT1Q8IXI2 618 aa20.59■□□□□ 0.89
FOXA1-203ENST00000553751 MFSD2AQ8NA29 543 aa20.59■□□□□ 0.89
FOXA1-203ENST00000553751 DEFB124Q8NES8 71 aa20.59■□□□□ 0.89
FOXA1-203ENST00000553751 HCAR2Q8TDS4 363 aa20.59■□□□□ 0.89
FOXA1-203ENST00000553751 SKA1Q96BD8 255 aa20.59■□□□□ 0.89
FOXA1-203ENST00000553751 NSMCE3Q96MG7 304 aa20.59■□□□□ 0.89
FOXA1-203ENST00000553751 ZNF641Q96N77 438 aaPredicted RBP20.59■□□□□ 0.89
FOXA1-203ENST00000553751 RNF157Q96PX1 679 aa20.59■□□□□ 0.89
FOXA1-203ENST00000553751 GOLPH3Q9H4A6 298 aa20.59■□□□□ 0.89
FOXA1-203ENST00000553751 SUV39H2Q9H5I1 410 aa20.59■□□□□ 0.89
FOXA1-203ENST00000553751 ATP13A3Q9H7F0 1226 aa20.59■□□□□ 0.89
FOXA1-203ENST00000553751 FZD3Q9NPG1 666 aa20.59■□□□□ 0.89
FOXA1-203ENST00000553751 TM7SF3Q9NS93 570 aa20.59■□□□□ 0.89
FOXA1-203ENST00000553751 IMPACTQ9P2X3 320 aa20.59■□□□□ 0.89
FOXA1-203ENST00000553751 TRPM6Q9BX84 2022 aa20.59■□□□□ 0.89
FOXA1-203ENST00000553751 RCCD1A6NED2 376 aa20.58■□□□□ 0.89
FOXA1-203ENST00000553751 KCNK3O14649 394 aa20.58■□□□□ 0.89
FOXA1-203ENST00000553751 SPOPO43791 374 aa20.58■□□□□ 0.89
FOXA1-203ENST00000553751 MAP3K6O95382 1288 aa20.58■□□□□ 0.89
FOXA1-203ENST00000553751 KRT1P04264 644 aa20.58■□□□□ 0.89
FOXA1-203ENST00000553751 CR2P20023 1033 aa20.58■□□□□ 0.89
FOXA1-203ENST00000553751 HNRNPA2B1P22626 353 aaKnown RBP20.58■□□□□ 0.89
FOXA1-203ENST00000553751 HSPA9P38646 679 aaKnown RBP20.58■□□□□ 0.89
FOXA1-203ENST00000553751 GBE1Q04446 702 aa20.58■□□□□ 0.89
FOXA1-203ENST00000553751 TTC7BQ86TV6 843 aa20.58■□□□□ 0.89
FOXA1-203ENST00000553751 ZSCAN30Q86W11 494 aa20.58■□□□□ 0.89
FOXA1-203ENST00000553751 ZSWIM9Q86XI8 627 aa20.58■□□□□ 0.89
FOXA1-203ENST00000553751 PGBD5Q8N414 524 aa20.58■□□□□ 0.89
FOXA1-203ENST00000553751 PLD5Q8N7P1 536 aa20.58■□□□□ 0.89
FOXA1-203ENST00000553751 SPC24Q8NBT2 197 aa20.58■□□□□ 0.89
FOXA1-203ENST00000553751 FEM1CQ96JP0 617 aa20.58■□□□□ 0.89
FOXA1-203ENST00000553751 BAG1Q99933 345 aaPredicted RBP20.58■□□□□ 0.89
FOXA1-203ENST00000553751 MYOCQ99972 504 aa20.58■□□□□ 0.89
FOXA1-203ENST00000553751 MGME1Q9BQP7 344 aa20.58■□□□□ 0.89
FOXA1-203ENST00000553751 SLC17A9Q9BYT1 436 aa20.58■□□□□ 0.89
FOXA1-203ENST00000553751 SALL4Q9UJQ4 1053 aa20.58■□□□□ 0.89
FOXA1-203ENST00000553751 SHROOM3Q8TF72 1996 aa20.57■□□□□ 0.88
FOXA1-203ENST00000553751 CABIN1Q9Y6J0 2220 aa20.57■□□□□ 0.88
FOXA1-203ENST00000553751 TLR4O00206 839 aa20.57■□□□□ 0.88
FOXA1-203ENST00000553751 NEMP1O14524 444 aa20.57■□□□□ 0.88
FOXA1-203ENST00000553751 CEACAM1P13688 526 aa20.57■□□□□ 0.88
FOXA1-203ENST00000553751 ITIH2P19823 946 aa20.57■□□□□ 0.88
FOXA1-203ENST00000553751 SERPINA4P29622 427 aa20.57■□□□□ 0.88
FOXA1-203ENST00000553751 AKT2P31751 481 aa20.57■□□□□ 0.88
FOXA1-203ENST00000553751 SCNN1BP51168 640 aa20.57■□□□□ 0.88
FOXA1-203ENST00000553751 SUOXP51687 545 aa20.57■□□□□ 0.88
FOXA1-203ENST00000553751 AP1S1P61966 158 aa20.57■□□□□ 0.88
FOXA1-203ENST00000553751 OVGP1Q12889 678 aa20.57■□□□□ 0.88
FOXA1-203ENST00000553751 STAT4Q14765 748 aa20.57■□□□□ 0.88
FOXA1-203ENST00000553751 SLC9A4Q6AI14 798 aa20.57■□□□□ 0.88
FOXA1-203ENST00000553751 C11orf63Q6NUN7 778 aa20.57■□□□□ 0.88
FOXA1-203ENST00000553751 BRAT1Q6PJG6 821 aa20.57■□□□□ 0.88
FOXA1-203ENST00000553751 GCNT7Q6ZNI0 430 aa20.57■□□□□ 0.88
FOXA1-203ENST00000553751 SPATS2Q86XZ4 545 aaKnown RBP20.57■□□□□ 0.88
FOXA1-203ENST00000553751 ACRBPQ8NEB7 543 aa20.57■□□□□ 0.88
FOXA1-203ENST00000553751 ECHDC3Q96DC8 303 aa20.57■□□□□ 0.88
FOXA1-203ENST00000553751 C1QTNF2Q9BXJ5 285 aa20.57■□□□□ 0.88
FOXA1-203ENST00000553751 DDX56Q9NY93 547 aaKnown RBP20.57■□□□□ 0.88
FOXA1-203ENST00000553751 ALG6Q9Y672 507 aa20.57■□□□□ 0.88
FOXA1-203ENST00000553751 ANKRD36A6QL64 1941 aa20.57■□□□□ 0.88
FOXA1-203ENST00000553751 TTC24A2A3L6 582 aaPredicted RBP20.56■□□□□ 0.88
FOXA1-203ENST00000553751 IGLON5A6NGN9 336 aa20.56■□□□□ 0.88
FOXA1-203ENST00000553751 TRAFD1O14545 582 aaPredicted RBP20.56■□□□□ 0.88
FOXA1-203ENST00000553751 RAD51BO15315 384 aa20.56■□□□□ 0.88
FOXA1-203ENST00000553751 PSTPIP1O43586 416 aa20.56■□□□□ 0.88
FOXA1-203ENST00000553751 SH3BP5O60239 455 aa20.56■□□□□ 0.88
FOXA1-203ENST00000553751 IPO7O95373 1038 aaKnown RBP20.56■□□□□ 0.88
FOXA1-203ENST00000553751 TNNT1P13805 278 aa20.56■□□□□ 0.88
FOXA1-203ENST00000553751 MMP13P45452 471 aa20.56■□□□□ 0.88
FOXA1-203ENST00000553751 CCT8P50990 548 aa20.56■□□□□ 0.88
FOXA1-203ENST00000553751 BCL2L1Q07817 233 aa20.56■□□□□ 0.88
FOXA1-203ENST00000553751 SLC10A2Q12908 348 aaPredicted RBP20.56■□□□□ 0.88
FOXA1-203ENST00000553751 UGP2Q16851 508 aa20.56■□□□□ 0.88
FOXA1-203ENST00000553751 MARC1Q5VT66 337 aa20.56■□□□□ 0.88
FOXA1-203ENST00000553751 NAXDQ8IW45 347 aa20.56■□□□□ 0.88
FOXA1-203ENST00000553751 TEX26Q8N6G2 289 aa20.56■□□□□ 0.88
FOXA1-203ENST00000553751 NSMCE1Q8WV22 266 aa20.56■□□□□ 0.88
FOXA1-203ENST00000553751 NUDCD1Q96RS6 583 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms