RNA–Protein interactions for RNA: ENST00000553636.1

CCNK-202, Transcript of cyclin K, humanhuman

TSL 2

Gene CCNK, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-202ENST00000553636 RGRP47804 291 aa11.75□□□□□ -0.53
CCNK-202ENST00000553636 HCAR3P49019 387 aa11.75□□□□□ -0.53
CCNK-202ENST00000553636 ZNF135P52742 658 aaPredicted RBP11.75□□□□□ -0.53
CCNK-202ENST00000553636 SGCGQ13326 291 aa11.75□□□□□ -0.53
CCNK-202ENST00000553636 DPYSL2Q16555 572 aa11.75□□□□□ -0.53
CCNK-202ENST00000553636 BOLA3Q53S33 107 aa11.75□□□□□ -0.53
CCNK-202ENST00000553636 CFAP58Q5T655 872 aa11.75□□□□□ -0.53
CCNK-202ENST00000553636 AFMIDQ63HM1 303 aa11.75□□□□□ -0.53
CCNK-202ENST00000553636 SPECC1LQ69YQ0 1117 aa11.75□□□□□ -0.53
CCNK-202ENST00000553636 KYAT3Q6YP21 454 aaKnown RBP11.75□□□□□ -0.53
CCNK-202ENST00000553636 KDM7AQ6ZMT4 941 aa11.75□□□□□ -0.53
CCNK-202ENST00000553636 Q6ZSR6 202 aa11.75□□□□□ -0.53
CCNK-202ENST00000553636 KANSL1Q7Z3B3 1105 aa11.75□□□□□ -0.53
CCNK-202ENST00000553636 ABI3BPQ7Z7G0 1075 aa11.75□□□□□ -0.53
CCNK-202ENST00000553636 TTC7BQ86TV6 843 aa11.75□□□□□ -0.53
CCNK-202ENST00000553636 TP53INP2Q8IXH6 220 aa11.75□□□□□ -0.53
CCNK-202ENST00000553636 SLC22A18ASQ8N1D0 253 aa11.75□□□□□ -0.53
CCNK-202ENST00000553636 NIPA2Q8N8Q9 360 aa11.75□□□□□ -0.53
CCNK-202ENST00000553636 ZNF564Q8TBZ8 553 aaPredicted RBP11.75□□□□□ -0.53
CCNK-202ENST00000553636 CNDP2Q96KP4 475 aaKnown RBP11.75□□□□□ -0.53
CCNK-202ENST00000553636 WRAP53Q9BUR4 548 aaKnown RBP11.75□□□□□ -0.53
CCNK-202ENST00000553636 CINPQ9BW66 212 aaPredicted RBP11.75□□□□□ -0.53
CCNK-202ENST00000553636 USP24Q9UPU5 2620 aa11.75□□□□□ -0.53
CCNK-202ENST00000553636 LRRK1Q38SD2 2015 aa11.75□□□□□ -0.53
CCNK-202ENST00000553636 TDRD6O60522 2096 aaKnown RBP11.75□□□□□ -0.53
CCNK-202ENST00000553636 SHROOM3Q8TF72 1996 aa11.74□□□□□ -0.53
CCNK-202ENST00000553636 IGF2RP11717 2491 aa11.74□□□□□ -0.53
CCNK-202ENST00000553636 MYO1FO00160 1098 aa11.74□□□□□ -0.53
CCNK-202ENST00000553636 FPGTO14772 594 aa11.74□□□□□ -0.53
CCNK-202ENST00000553636 AREL1O15033 823 aa11.74□□□□□ -0.53
CCNK-202ENST00000553636 MMP20O60882 483 aa11.74□□□□□ -0.53
CCNK-202ENST00000553636 LDOC1O95751 146 aaPredicted RBP11.74□□□□□ -0.53
CCNK-202ENST00000553636 PYGBP11216 843 aa11.74□□□□□ -0.53
CCNK-202ENST00000553636 TIMP2P16035 220 aa11.74□□□□□ -0.53
CCNK-202ENST00000553636 SLC25A11Q02978 314 aaKnown RBP11.74□□□□□ -0.53
CCNK-202ENST00000553636 DNAJC3Q13217 504 aa11.74□□□□□ -0.53
CCNK-202ENST00000553636 TRIM14Q14142 442 aa11.74□□□□□ -0.53
CCNK-202ENST00000553636 KRT81Q14533 505 aa11.74□□□□□ -0.53
CCNK-202ENST00000553636 ZNF542PQ5EBM4 170 aa11.74□□□□□ -0.53
CCNK-202ENST00000553636 TMCO3Q6UWJ1 677 aa11.74□□□□□ -0.53
CCNK-202ENST00000553636 POLNQ7Z5Q5 900 aa11.74□□□□□ -0.53
CCNK-202ENST00000553636 ZSCAN30Q86W11 494 aa11.74□□□□□ -0.53
CCNK-202ENST00000553636 CPNE8Q86YQ8 564 aa11.74□□□□□ -0.53
CCNK-202ENST00000553636 PAF1Q8N7H5 531 aa11.74□□□□□ -0.53
CCNK-202ENST00000553636 TSEN2Q8NCE0 465 aaKnown RBP11.74□□□□□ -0.53
CCNK-202ENST00000553636 CXorf40AQ8TE69 158 aa11.74□□□□□ -0.53
CCNK-202ENST00000553636 BMFQ96LC9 184 aa11.74□□□□□ -0.53
CCNK-202ENST00000553636 CSPG4P5Q96PW8 444 aa11.74□□□□□ -0.53
CCNK-202ENST00000553636 KLF6Q99612 283 aaPredicted RBP11.74□□□□□ -0.53
CCNK-202ENST00000553636 C1QTNF2Q9BXJ5 285 aa11.74□□□□□ -0.53
CCNK-202ENST00000553636 PACSIN1Q9BY11 444 aa11.74□□□□□ -0.53
CCNK-202ENST00000553636 CPEB1Q9BZB8 566 aaKnown RBP11.74□□□□□ -0.53
CCNK-202ENST00000553636 DEF6Q9H4E7 631 aa11.74□□□□□ -0.53
CCNK-202ENST00000553636 PCDH18Q9HCL0 1135 aa11.74□□□□□ -0.53
CCNK-202ENST00000553636 ETNK2Q9NVF9 386 aa11.74□□□□□ -0.53
CCNK-202ENST00000553636 KLHL11Q9NVR0 708 aa11.74□□□□□ -0.53
CCNK-202ENST00000553636 CTTNBP2NLQ9P2B4 639 aa11.74□□□□□ -0.53
CCNK-202ENST00000553636 DKK3Q9UBP4 350 aa11.74□□□□□ -0.53
CCNK-202ENST00000553636 IPO11Q9UI26 975 aaKnown RBP11.74□□□□□ -0.53
CCNK-202ENST00000553636 NENFQ9UMX5 172 aa11.74□□□□□ -0.53
CCNK-202ENST00000553636 KMT2BQ9UMN6 2715 aaPredicted RBP11.74□□□□□ -0.53
CCNK-202ENST00000553636 PLXNB3Q9ULL4 1909 aa11.74□□□□□ -0.53
CCNK-202ENST00000553636 FRYQ5TBA9 3013 aa11.73□□□□□ -0.53
CCNK-202ENST00000553636 FFAR2O15552 330 aa11.73□□□□□ -0.53
CCNK-202ENST00000553636 TM7SF2O76062 418 aa11.73□□□□□ -0.53
CCNK-202ENST00000553636 DKK1O94907 266 aa11.73□□□□□ -0.53
CCNK-202ENST00000553636 PRKCGP05129 697 aa11.73□□□□□ -0.53
CCNK-202ENST00000553636 TPM1P09493 284 aa11.73□□□□□ -0.53
CCNK-202ENST00000553636 HNRNPH3P31942 346 aaKnown RBP11.73□□□□□ -0.53
CCNK-202ENST00000553636 RABIFP47224 123 aa11.73□□□□□ -0.53
CCNK-202ENST00000553636 CDH6P55285 790 aa11.73□□□□□ -0.53
CCNK-202ENST00000553636 SEMG2Q02383 582 aa11.73□□□□□ -0.53
CCNK-202ENST00000553636 IL10RBQ08334 325 aa11.73□□□□□ -0.53
CCNK-202ENST00000553636 GRM3Q14832 879 aa11.73□□□□□ -0.53
CCNK-202ENST00000553636 DHRS13Q6UX07 377 aa11.73□□□□□ -0.53
CCNK-202ENST00000553636 SRLQ86TD4 932 aa11.73□□□□□ -0.53
CCNK-202ENST00000553636 MARCH9Q86YJ5 346 aa11.73□□□□□ -0.53
CCNK-202ENST00000553636 CAMK1DQ8IU85 385 aa11.73□□□□□ -0.53
CCNK-202ENST00000553636 VSTM4Q8IW00 320 aa11.73□□□□□ -0.53
CCNK-202ENST00000553636 LZTR1Q8N653 840 aa11.73□□□□□ -0.53
CCNK-202ENST00000553636 DENND6BQ8NEG7 585 aa11.73□□□□□ -0.53
CCNK-202ENST00000553636 OR8K1Q8NGG5 319 aa11.73□□□□□ -0.53
CCNK-202ENST00000553636 TEKT4Q8WW24 435 aa11.73□□□□□ -0.53
CCNK-202ENST00000553636 CTNNBL1Q8WYA6 563 aaPredicted RBP11.73□□□□□ -0.53
CCNK-202ENST00000553636 ZCCHC14Q8WYQ9 949 aaKnown RBP11.73□□□□□ -0.53
CCNK-202ENST00000553636 DNAJC7Q99615 494 aa11.73□□□□□ -0.53
CCNK-202ENST00000553636 SUV39H2Q9H5I1 410 aa11.73□□□□□ -0.53
CCNK-202ENST00000553636 ZNHIT6Q9NWK9 470 aaKnown RBP11.73□□□□□ -0.53
CCNK-202ENST00000553636 UCKL1Q9NWZ5 548 aa11.73□□□□□ -0.53
CCNK-202ENST00000553636 DNAJC28Q9NX36 388 aa11.73□□□□□ -0.53
CCNK-202ENST00000553636 COQ6Q9Y2Z9 468 aa11.73□□□□□ -0.53
CCNK-202ENST00000553636 HS3ST3A1Q9Y663 406 aa11.73□□□□□ -0.53
CCNK-202ENST00000553636 TSPAN11A1L157 253 aa11.72□□□□□ -0.53
CCNK-202ENST00000553636 FAM149AA5PLN7 773 aa11.72□□□□□ -0.53
CCNK-202ENST00000553636 FAM221BA6H8Z2 402 aa11.72□□□□□ -0.53
CCNK-202ENST00000553636 TMEM110-MUSTN1A8MSY1 372 aa11.72□□□□□ -0.53
CCNK-202ENST00000553636 MUSKO15146 869 aa11.72□□□□□ -0.53
CCNK-202ENST00000553636 AKR1B10O60218 316 aa11.72□□□□□ -0.53
CCNK-202ENST00000553636 BUB1BO60566 1050 aaPredicted RBP11.72□□□□□ -0.53
CCNK-202ENST00000553636 KRT37O76014 449 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms