RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 CEP44Q9C0F1 390 aa14□□□□□ -0.17
PRPF39-204ENST00000553605 ZDHHC6Q9H6R6 413 aa14□□□□□ -0.17
PRPF39-204ENST00000553605 GPN2Q9H9Y4 310 aaPredicted RBP14□□□□□ -0.17
PRPF39-204ENST00000553605 DDIT4Q9NX09 232 aa14□□□□□ -0.17
PRPF39-204ENST00000553605 FAM13BQ9NYF5 915 aa14□□□□□ -0.17
PRPF39-204ENST00000553605 SERTAD1Q9UHV2 236 aa14□□□□□ -0.17
PRPF39-204ENST00000553605 MAPK8IP1Q9UQF2 711 aa14□□□□□ -0.17
PRPF39-204ENST00000553605 PCDHB4Q9Y5E5 795 aa14□□□□□ -0.17
PRPF39-204ENST00000553605 B3GALT1Q9Y5Z6 326 aa14□□□□□ -0.17
PRPF39-204ENST00000553605 K7EM74 188 aa13.99□□□□□ -0.17
PRPF39-204ENST00000553605 B4GAT1O43505 415 aa13.99□□□□□ -0.17
PRPF39-204ENST00000553605 NUDT21O43809 227 aaKnown RBP13.99□□□□□ -0.17
PRPF39-204ENST00000553605 MMP20O60882 483 aa13.99□□□□□ -0.17
PRPF39-204ENST00000553605 DDAH2O95865 285 aa13.99□□□□□ -0.17
PRPF39-204ENST00000553605 HTR1BP28222 390 aa13.99□□□□□ -0.17
PRPF39-204ENST00000553605 OAS2P29728 719 aaKnown RBP13.99□□□□□ -0.17
PRPF39-204ENST00000553605 GPD2P43304 727 aa13.99□□□□□ -0.17
PRPF39-204ENST00000553605 SRP54P61011 504 aaKnown RBP13.99□□□□□ -0.17
PRPF39-204ENST00000553605 CDK17Q00537 523 aa13.99□□□□□ -0.17
PRPF39-204ENST00000553605 MTA1Q13330 715 aa13.99□□□□□ -0.17
PRPF39-204ENST00000553605 ARHGAP44Q17R89 818 aa13.99□□□□□ -0.17
PRPF39-204ENST00000553605 AMZ1Q400G9 498 aa13.99□□□□□ -0.17
PRPF39-204ENST00000553605 C14orf28Q4W4Y0 310 aa13.99□□□□□ -0.17
PRPF39-204ENST00000553605 ALFQ53S48 1182 aa13.99□□□□□ -0.17
PRPF39-204ENST00000553605 SETD3Q86TU7 594 aaPredicted RBP13.99□□□□□ -0.17
PRPF39-204ENST00000553605 FAM114A1Q8IWE2 563 aa13.99□□□□□ -0.17
PRPF39-204ENST00000553605 SFTPA2Q8IWL1 248 aa13.99□□□□□ -0.17
PRPF39-204ENST00000553605 CCDC112Q8NEF3 446 aa13.99□□□□□ -0.17
PRPF39-204ENST00000553605 FAM46DQ8NEK8 389 aa13.99□□□□□ -0.17
PRPF39-204ENST00000553605 ART4Q93070 314 aa13.99□□□□□ -0.17
PRPF39-204ENST00000553605 KIAA1143Q96AT1 154 aaPredicted RBP13.99□□□□□ -0.17
PRPF39-204ENST00000553605 MED15Q96RN5 788 aa13.99□□□□□ -0.17
PRPF39-204ENST00000553605 RBM15Q96T37 977 aaKnown RBP eCLIP13.99□□□□□ -0.17
PRPF39-204ENST00000553605 EFHD1Q9BUP0 239 aa13.99□□□□□ -0.17
PRPF39-204ENST00000553605 DDA1Q9BW61 102 aa13.99□□□□□ -0.17
PRPF39-204ENST00000553605 ASPSCR1Q9BZE9 553 aa13.99□□□□□ -0.17
PRPF39-204ENST00000553605 SIK2Q9H0K1 926 aa13.99□□□□□ -0.17
PRPF39-204ENST00000553605 THAP9Q9H5L6 903 aa13.99□□□□□ -0.17
PRPF39-204ENST00000553605 HECAQ9UBI9 543 aaPredicted RBP13.99□□□□□ -0.17
PRPF39-204ENST00000553605 MTMR6Q9Y217 621 aa13.99□□□□□ -0.17
PRPF39-204ENST00000553605 CSMD1Q96PZ7 3565 aa13.98□□□□□ -0.17
PRPF39-204ENST00000553605 IGHV5-10-1A0A0J9YXX1 117 aa13.98□□□□□ -0.17
PRPF39-204ENST00000553605 TTLL8A6PVC2 850 aa13.98□□□□□ -0.17
PRPF39-204ENST00000553605 PAGE1O75459 146 aa13.98□□□□□ -0.17
PRPF39-204ENST00000553605 ADCY5O95622 1261 aa13.98□□□□□ -0.17
PRPF39-204ENST00000553605 TNFP01375 233 aa13.98□□□□□ -0.17
PRPF39-204ENST00000553605 SERPINH1P50454 418 aaKnown RBP13.98□□□□□ -0.17
PRPF39-204ENST00000553605 SLC20A2Q08357 652 aa13.98□□□□□ -0.17
PRPF39-204ENST00000553605 CUL4AQ13619 759 aa13.98□□□□□ -0.17
PRPF39-204ENST00000553605 HLTFQ14527 1009 aaKnown RBP eCLIP13.98□□□□□ -0.17
PRPF39-204ENST00000553605 TAF5Q15542 800 aa13.98□□□□□ -0.17
PRPF39-204ENST00000553605 KLHL40Q2TBA0 621 aa13.98□□□□□ -0.17
PRPF39-204ENST00000553605 ZNF805Q5CZA5 627 aa13.98□□□□□ -0.17
PRPF39-204ENST00000553605 TCERG1LQ5VWI1 586 aa13.98□□□□□ -0.17
PRPF39-204ENST00000553605 RETSATQ6NUM9 610 aa13.98□□□□□ -0.17
PRPF39-204ENST00000553605 TCTN3Q6NUS6 607 aa13.98□□□□□ -0.17
PRPF39-204ENST00000553605 NYAP1Q6ZVC0 841 aa13.98□□□□□ -0.17
PRPF39-204ENST00000553605 TAF8Q7Z7C8 310 aa13.98□□□□□ -0.17
PRPF39-204ENST00000553605 ZNF768Q9H5H4 540 aaKnown RBP13.98□□□□□ -0.17
PRPF39-204ENST00000553605 KLQ9UEF7 1012 aa13.98□□□□□ -0.17
PRPF39-204ENST00000553605 MED13Q9UHV7 2174 aa13.98□□□□□ -0.17
PRPF39-204ENST00000553605 LOC101059948A0A1B0GTJ6 334 aa13.97□□□□□ -0.17
PRPF39-204ENST00000553605 MKRN2OSH3BPM6 223 aa13.97□□□□□ -0.17
PRPF39-204ENST00000553605 AREL1O15033 823 aa13.97□□□□□ -0.17
PRPF39-204ENST00000553605 YEATS4O95619 227 aa13.97□□□□□ -0.17
PRPF39-204ENST00000553605 EPB41P11171 864 aaKnown RBP13.97□□□□□ -0.17
PRPF39-204ENST00000553605 MAP4P27816 1152 aaKnown RBP13.97□□□□□ -0.17
PRPF39-204ENST00000553605 GKP32189 559 aa13.97□□□□□ -0.17
PRPF39-204ENST00000553605 OR1D5P58170 312 aa13.97□□□□□ -0.17
PRPF39-204ENST00000553605 MC1RQ01726 317 aa13.97□□□□□ -0.17
PRPF39-204ENST00000553605 NFATC4Q14934 902 aa13.97□□□□□ -0.17
PRPF39-204ENST00000553605 IRF4Q15306 451 aa13.97□□□□□ -0.17
PRPF39-204ENST00000553605 EDRF1Q3B7T1 1238 aa13.97□□□□□ -0.17
PRPF39-204ENST00000553605 DCAF17Q5H9S7 520 aaPredicted RBP13.97□□□□□ -0.17
PRPF39-204ENST00000553605 C16orf46Q6P387 395 aa13.97□□□□□ -0.17
PRPF39-204ENST00000553605 ASB18Q6ZVZ8 466 aa13.97□□□□□ -0.17
PRPF39-204ENST00000553605 TTC7BQ86TV6 843 aa13.97□□□□□ -0.17
PRPF39-204ENST00000553605 CCDC13Q8IYE1 715 aa13.97□□□□□ -0.17
PRPF39-204ENST00000553605 DEFB106AQ8N104 65 aa13.97□□□□□ -0.17
PRPF39-204ENST00000553605 RYBPQ8N488 228 aaPredicted RBP13.97□□□□□ -0.17
PRPF39-204ENST00000553605 AGBL5Q8NDL9 886 aa13.97□□□□□ -0.17
PRPF39-204ENST00000553605 OR7D4Q8NG98 312 aa13.97□□□□□ -0.17
PRPF39-204ENST00000553605 CPT1CQ8TCG5 803 aa13.97□□□□□ -0.17
PRPF39-204ENST00000553605 CXorf40AQ8TE69 158 aa13.97□□□□□ -0.17
PRPF39-204ENST00000553605 STK32AQ8WU08 396 aa13.97□□□□□ -0.17
PRPF39-204ENST00000553605 CCDC74BQ96LY2 380 aa13.97□□□□□ -0.17
PRPF39-204ENST00000553605 ZNF396Q96N95 335 aaPredicted RBP13.97□□□□□ -0.17
PRPF39-204ENST00000553605 NUDT22Q9BRQ3 303 aa13.97□□□□□ -0.17
PRPF39-204ENST00000553605 SPON2Q9BUD6 331 aa13.97□□□□□ -0.17
PRPF39-204ENST00000553605 SLC4A5Q9BY07 1137 aa13.97□□□□□ -0.17
PRPF39-204ENST00000553605 DPEP2Q9H4A9 486 aa13.97□□□□□ -0.17
PRPF39-204ENST00000553605 SLC39A1Q9NY26 324 aa13.97□□□□□ -0.17
PRPF39-204ENST00000553605 PILRAQ9UKJ1 303 aa13.97□□□□□ -0.17
PRPF39-204ENST00000553605 FCF1Q9Y324 198 aaKnown RBP13.97□□□□□ -0.17
PRPF39-204ENST00000553605 B4DGG1 531 aa13.96□□□□□ -0.17
PRPF39-204ENST00000553605 E5RJQ4 531 aa13.96□□□□□ -0.17
PRPF39-204ENST00000553605 ACTN4O43707 911 aaKnown RBP13.96□□□□□ -0.17
PRPF39-204ENST00000553605 ZMPSTE24O75844 475 aa13.96□□□□□ -0.17
PRPF39-204ENST00000553605 CLDN1O95832 211 aa13.96□□□□□ -0.17
PRPF39-204ENST00000553605 TCN2P20062 427 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms