RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 NSUN2Q08J23 767 aaKnown RBP eCLIP23.07■■□□□ 1.28
TDP1-206ENST00000553569 CCDC13Q8IYE1 715 aa23.07■■□□□ 1.28
TDP1-206ENST00000553569 RNF10Q8N5U6 811 aaKnown RBP23.07■■□□□ 1.28
TDP1-206ENST00000553569 PAF1Q8N7H5 531 aa23.07■■□□□ 1.28
TDP1-206ENST00000553569 MAML1Q92585 1016 aa23.07■■□□□ 1.28
TDP1-206ENST00000553569 ALG3Q92685 438 aa23.07■■□□□ 1.28
TDP1-206ENST00000553569 HAUS1Q96CS2 278 aa23.07■■□□□ 1.28
TDP1-206ENST00000553569 EDEM2Q9BV94 578 aa23.07■■□□□ 1.28
TDP1-206ENST00000553569 HEMGNQ9BXL5 484 aa23.07■■□□□ 1.28
TDP1-206ENST00000553569 SUV39H2Q9H5I1 410 aa23.07■■□□□ 1.28
TDP1-206ENST00000553569 SCUBE2Q9NQ36 999 aa23.07■■□□□ 1.28
TDP1-206ENST00000553569 LZTFL1Q9NQ48 299 aa23.07■■□□□ 1.28
TDP1-206ENST00000553569 TTLL3Q9Y4R7 772 aa23.07■■□□□ 1.28
TDP1-206ENST00000553569 FADS3Q9Y5Q0 445 aa23.07■■□□□ 1.28
TDP1-206ENST00000553569 DOCK9Q9BZ29 2069 aa23.06■■□□□ 1.28
TDP1-206ENST00000553569 A0A1W2PPC4 97 aa23.06■■□□□ 1.28
TDP1-206ENST00000553569 A0A1W2PQU0 124 aa23.06■■□□□ 1.28
TDP1-206ENST00000553569 PPP1R12AO14974 1030 aaPredicted RBP23.06■■□□□ 1.28
TDP1-206ENST00000553569 GDF9O60383 454 aa23.06■■□□□ 1.28
TDP1-206ENST00000553569 FOXD2O60548 495 aaPredicted RBP23.06■■□□□ 1.28
TDP1-206ENST00000553569 SERPINF2P08697 491 aa23.06■■□□□ 1.28
TDP1-206ENST00000553569 PECAM1P16284 738 aaPredicted RBP23.06■■□□□ 1.28
TDP1-206ENST00000553569 XPAP23025 273 aaPredicted RBP23.06■■□□□ 1.28
TDP1-206ENST00000553569 SERPINA4P29622 427 aa23.06■■□□□ 1.28
TDP1-206ENST00000553569 MAPK8P45983 427 aa23.06■■□□□ 1.28
TDP1-206ENST00000553569 AP1S1P61966 158 aa23.06■■□□□ 1.28
TDP1-206ENST00000553569 BCL2L1Q07817 233 aa23.06■■□□□ 1.28
TDP1-206ENST00000553569 PPIDQ08752 370 aaKnown RBP23.06■■□□□ 1.28
TDP1-206ENST00000553569 ITKQ08881 620 aa23.06■■□□□ 1.28
TDP1-206ENST00000553569 AP1B1Q10567 949 aa23.06■■□□□ 1.28
TDP1-206ENST00000553569 HNRNPDQ14103 355 aaKnown RBP23.06■■□□□ 1.28
TDP1-206ENST00000553569 PDK1Q15118 436 aa23.06■■□□□ 1.28
TDP1-206ENST00000553569 PPP2R5EQ16537 467 aa23.06■■□□□ 1.28
TDP1-206ENST00000553569 SLC23A3Q6PIS1 610 aa23.06■■□□□ 1.28
TDP1-206ENST00000553569 B4GALNT4Q76KP1 1039 aa23.06■■□□□ 1.28
TDP1-206ENST00000553569 TTC7BQ86TV6 843 aa23.06■■□□□ 1.28
TDP1-206ENST00000553569 TRIM69Q86WT6 500 aa23.06■■□□□ 1.28
TDP1-206ENST00000553569 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.06■■□□□ 1.28
TDP1-206ENST00000553569 TEX26Q8N6G2 289 aa23.06■■□□□ 1.28
TDP1-206ENST00000553569 KLK6Q92876 244 aa23.06■■□□□ 1.28
TDP1-206ENST00000553569 SLC6A18Q96N87 628 aa23.06■■□□□ 1.28
TDP1-206ENST00000553569 OLFM3Q96PB7 478 aa23.06■■□□□ 1.28
TDP1-206ENST00000553569 NUDCD1Q96RS6 583 aa23.06■■□□□ 1.28
TDP1-206ENST00000553569 ORAI3Q9BRQ5 295 aa23.06■■□□□ 1.28
TDP1-206ENST00000553569 EBF2Q9HAK2 575 aa23.06■■□□□ 1.28
TDP1-206ENST00000553569 TM9SF3Q9HD45 589 aa23.06■■□□□ 1.28
TDP1-206ENST00000553569 RBM22Q9NW64 420 aaKnown RBP eCLIP23.06■■□□□ 1.28
TDP1-206ENST00000553569 SAE1Q9UBE0 346 aaPredicted RBP23.06■■□□□ 1.28
TDP1-206ENST00000553569 GGT7Q9UJ14 662 aa23.06■■□□□ 1.28
TDP1-206ENST00000553569 SLC6A14Q9UN76 642 aa23.06■■□□□ 1.28
TDP1-206ENST00000553569 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.05■■□□□ 1.28
TDP1-206ENST00000553569 C10orf142B7Z368 130 aa23.05■■□□□ 1.28
TDP1-206ENST00000553569 KCNK1O00180 336 aa23.05■■□□□ 1.28
TDP1-206ENST00000553569 NEMP1O14524 444 aa23.05■■□□□ 1.28
TDP1-206ENST00000553569 CCNB1P14635 433 aa23.05■■□□□ 1.28
TDP1-206ENST00000553569 TGM2P21980 687 aa23.05■■□□□ 1.28
TDP1-206ENST00000553569 PEX5P50542 639 aa23.05■■□□□ 1.28
TDP1-206ENST00000553569 LAYNQ6UX15 382 aa23.05■■□□□ 1.28
TDP1-206ENST00000553569 PRPF39Q86UA1 669 aaKnown RBP23.05■■□□□ 1.28
TDP1-206ENST00000553569 UBL4BQ8N7F7 174 aa23.05■■□□□ 1.28
TDP1-206ENST00000553569 C1orf216Q8TAB5 229 aa23.05■■□□□ 1.28
TDP1-206ENST00000553569 RAB7BQ96AH8 199 aa23.05■■□□□ 1.28
TDP1-206ENST00000553569 NSMCE3Q96MG7 304 aa23.05■■□□□ 1.28
TDP1-206ENST00000553569 ZNF641Q96N77 438 aaPredicted RBP23.05■■□□□ 1.28
TDP1-206ENST00000553569 CAPN10Q9HC96 672 aa23.05■■□□□ 1.28
TDP1-206ENST00000553569 SEPT10Q9P0V9 454 aa23.05■■□□□ 1.28
TDP1-206ENST00000553569 DKK3Q9UBP4 350 aa23.05■■□□□ 1.28
TDP1-206ENST00000553569 PCDH15Q96QU1 1955 aa23.05■■□□□ 1.28
TDP1-206ENST00000553569 MIF4GDA9UHW6 222 aaKnown RBP23.04■■□□□ 1.28
TDP1-206ENST00000553569 PRR5-ARHGAP8B1AHC4 643 aa23.04■■□□□ 1.28
TDP1-206ENST00000553569 LATO43561 262 aa23.04■■□□□ 1.28
TDP1-206ENST00000553569 AP1G1O43747 822 aa23.04■■□□□ 1.28
TDP1-206ENST00000553569 TIMP2P16035 220 aa23.04■■□□□ 1.28
TDP1-206ENST00000553569 CR2P20023 1033 aa23.04■■□□□ 1.28
TDP1-206ENST00000553569 COPS2P61201 443 aa23.04■■□□□ 1.28
TDP1-206ENST00000553569 ZNF211Q13398 564 aaPredicted RBP23.04■■□□□ 1.28
TDP1-206ENST00000553569 CCDC181Q5TID7 509 aa23.04■■□□□ 1.28
TDP1-206ENST00000553569 SEL1L3Q68CR1 1132 aa23.04■■□□□ 1.28
TDP1-206ENST00000553569 AADACL2Q6P093 401 aa23.04■■□□□ 1.28
TDP1-206ENST00000553569 HORMAD1Q86X24 394 aa23.04■■□□□ 1.28
TDP1-206ENST00000553569 FATE1Q969F0 183 aa23.04■■□□□ 1.28
TDP1-206ENST00000553569 SERAC1Q96JX3 654 aa23.04■■□□□ 1.28
TDP1-206ENST00000553569 HERPUD2Q9BSE4 406 aa23.04■■□□□ 1.28
TDP1-206ENST00000553569 NOD2Q9HC29 1040 aa23.04■■□□□ 1.28
TDP1-206ENST00000553569 AASDHPPTQ9NRN7 309 aa23.04■■□□□ 1.28
TDP1-206ENST00000553569 TPX2Q9ULW0 747 aaKnown RBP23.04■■□□□ 1.28
TDP1-206ENST00000553569 ZFR2Q9UPR6 939 aaKnown RBP23.04■■□□□ 1.28
TDP1-206ENST00000553569 PPP2R2CQ9Y2T4 447 aa23.04■■□□□ 1.28
TDP1-206ENST00000553569 TRPM6Q9BX84 2022 aa23.03■■□□□ 1.28
TDP1-206ENST00000553569 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.03■■□□□ 1.28
TDP1-206ENST00000553569 TSPAN11A1L157 253 aa23.03■■□□□ 1.28
TDP1-206ENST00000553569 UPK3BL1B0FP48 263 aa23.03■■□□□ 1.28
TDP1-206ENST00000553569 UPK3BL2E5RIL1 263 aa23.03■■□□□ 1.28
TDP1-206ENST00000553569 SPINT1O43278 529 aa23.03■■□□□ 1.28
TDP1-206ENST00000553569 JCHAINP01591 159 aa23.03■■□□□ 1.28
TDP1-206ENST00000553569 HLA-DQB2P05538 268 aa23.03■■□□□ 1.28
TDP1-206ENST00000553569 PRLRP16471 622 aa23.03■■□□□ 1.28
TDP1-206ENST00000553569 ENGP17813 658 aa23.03■■□□□ 1.28
TDP1-206ENST00000553569 ITIH2P19823 946 aa23.03■■□□□ 1.28
TDP1-206ENST00000553569 CETN2P41208 172 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms