RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 ELOVL2Q9NXB9 296 aa13.89□□□□□ -0.19
APEX1-205ENST00000553555 EVLQ9UI08 416 aaPredicted RBP13.89□□□□□ -0.19
APEX1-205ENST00000553555 ARIH1Q9Y4X5 557 aaPredicted RBP13.89□□□□□ -0.19
APEX1-205ENST00000553555 PCDHGC4Q9Y5F7 938 aa13.89□□□□□ -0.19
APEX1-205ENST00000553555 RAI2Q9Y5P3 530 aa13.89□□□□□ -0.19
APEX1-205ENST00000553555 ATG2BQ96BY7 2078 aa13.88□□□□□ -0.19
APEX1-205ENST00000553555 PRRT4C9JH25 899 aa13.88□□□□□ -0.19
APEX1-205ENST00000553555 TIMM44O43615 452 aa13.88□□□□□ -0.19
APEX1-205ENST00000553555 NDST3O95803 873 aa13.88□□□□□ -0.19
APEX1-205ENST00000553555 GSRP00390 522 aa13.88□□□□□ -0.19
APEX1-205ENST00000553555 PRLP01236 227 aa13.88□□□□□ -0.19
APEX1-205ENST00000553555 DLDP09622 509 aaKnown RBP13.88□□□□□ -0.19
APEX1-205ENST00000553555 PGAM1P18669 254 aa13.88□□□□□ -0.19
APEX1-205ENST00000553555 HLA-DPA1P20036 260 aa13.88□□□□□ -0.19
APEX1-205ENST00000553555 NNMTP40261 264 aa13.88□□□□□ -0.19
APEX1-205ENST00000553555 EIF2DP41214 584 aaKnown RBP13.88□□□□□ -0.19
APEX1-205ENST00000553555 SNRPD1P62314 119 aaKnown RBP13.88□□□□□ -0.19
APEX1-205ENST00000553555 KDSRQ06136 332 aa13.88□□□□□ -0.19
APEX1-205ENST00000553555 ZNF844Q08AG5 666 aa13.88□□□□□ -0.19
APEX1-205ENST00000553555 IFFO1Q0D2I5 559 aa13.88□□□□□ -0.19
APEX1-205ENST00000553555 MSLNQ13421 630 aaPredicted RBP13.88□□□□□ -0.19
APEX1-205ENST00000553555 STAT4Q14765 748 aa13.88□□□□□ -0.19
APEX1-205ENST00000553555 PTPRNQ16849 979 aa13.88□□□□□ -0.19
APEX1-205ENST00000553555 AAK1Q2M2I8 961 aa13.88□□□□□ -0.19
APEX1-205ENST00000553555 ACCSLQ4AC99 568 aa13.88□□□□□ -0.19
APEX1-205ENST00000553555 CARD16Q5EG05 197 aa13.88□□□□□ -0.19
APEX1-205ENST00000553555 PCID2Q5JVF3 399 aa13.88□□□□□ -0.19
APEX1-205ENST00000553555 SIRPB2Q5JXA9 342 aa13.88□□□□□ -0.19
APEX1-205ENST00000553555 CEP85LQ5SZL2 805 aa13.88□□□□□ -0.19
APEX1-205ENST00000553555 STEAP4Q687X5 459 aa13.88□□□□□ -0.19
APEX1-205ENST00000553555 NAIF1Q69YI7 327 aaPredicted RBP13.88□□□□□ -0.19
APEX1-205ENST00000553555 PLCD3Q8N3E9 789 aa13.88□□□□□ -0.19
APEX1-205ENST00000553555 NXPE3Q969Y0 559 aa13.88□□□□□ -0.19
APEX1-205ENST00000553555 CHFRQ96EP1 664 aa13.88□□□□□ -0.19
APEX1-205ENST00000553555 MYO19Q96H55 970 aa13.88□□□□□ -0.19
APEX1-205ENST00000553555 CCDC77Q9BR77 488 aa13.88□□□□□ -0.19
APEX1-205ENST00000553555 TRIM56Q9BRZ2 755 aaKnown RBP13.88□□□□□ -0.19
APEX1-205ENST00000553555 PHF7Q9BWX1 381 aaPredicted RBP13.88□□□□□ -0.19
APEX1-205ENST00000553555 TDRD1Q9BXT4 1180 aaKnown RBP13.88□□□□□ -0.19
APEX1-205ENST00000553555 SAMD15Q9P1V8 674 aa13.88□□□□□ -0.19
APEX1-205ENST00000553555 RABGEF1Q9UJ41 708 aa13.88□□□□□ -0.19
APEX1-205ENST00000553555 CHKBQ9Y259 395 aa13.88□□□□□ -0.19
APEX1-205ENST00000553555 TCF20Q9UGU0 1960 aaKnown RBP13.88□□□□□ -0.19
APEX1-205ENST00000553555 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.87□□□□□ -0.19
APEX1-205ENST00000553555 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.87□□□□□ -0.19
APEX1-205ENST00000553555 TCEA3O75764 348 aa13.87□□□□□ -0.19
APEX1-205ENST00000553555 FGF1P05230 155 aa13.87□□□□□ -0.19
APEX1-205ENST00000553555 COL4A2P08572 1712 aa13.87□□□□□ -0.19
APEX1-205ENST00000553555 MAPK8P45983 427 aa13.87□□□□□ -0.19
APEX1-205ENST00000553555 TRAF2Q12933 501 aa13.87□□□□□ -0.19
APEX1-205ENST00000553555 EIF4HQ15056 248 aaKnown RBP13.87□□□□□ -0.19
APEX1-205ENST00000553555 MYLK3Q32MK0 819 aa13.87□□□□□ -0.19
APEX1-205ENST00000553555 PLPP6Q8IY26 295 aa13.87□□□□□ -0.19
APEX1-205ENST00000553555 TERB1Q8NA31 727 aa13.87□□□□□ -0.19
APEX1-205ENST00000553555 FBF1Q8TES7 1133 aa13.87□□□□□ -0.19
APEX1-205ENST00000553555 FRS2Q8WU20 508 aa13.87□□□□□ -0.19
APEX1-205ENST00000553555 SH3GL2Q99962 352 aa13.87□□□□□ -0.19
APEX1-205ENST00000553555 KIFC1Q9BW19 673 aa13.87□□□□□ -0.19
APEX1-205ENST00000553555 ROPN1BQ9BZX4 212 aaPredicted RBP13.87□□□□□ -0.19
APEX1-205ENST00000553555 ROPN1Q9HAT0 212 aaPredicted RBP13.87□□□□□ -0.19
APEX1-205ENST00000553555 CHRAC1Q9NRG0 131 aa13.87□□□□□ -0.19
APEX1-205ENST00000553555 FAM53CQ9NYF3 392 aa13.87□□□□□ -0.19
APEX1-205ENST00000553555 LIMD1Q9UGP4 676 aa13.87□□□□□ -0.19
APEX1-205ENST00000553555 SOX13Q9UN79 622 aa13.87□□□□□ -0.19
APEX1-205ENST00000553555 F5P12259 2224 aa13.87□□□□□ -0.19
APEX1-205ENST00000553555 MUC22E2RYF6 1773 aaPredicted RBP13.87□□□□□ -0.19
APEX1-205ENST00000553555 XIRP2A4UGR9 3374 aa13.87□□□□□ -0.19
APEX1-205ENST00000553555 FAM237BA0A1B0GVD1 139 aa13.86□□□□□ -0.19
APEX1-205ENST00000553555 OPA1O60313 960 aa13.86□□□□□ -0.19
APEX1-205ENST00000553555 FZD6O60353 706 aa13.86□□□□□ -0.19
APEX1-205ENST00000553555 SYF2O95926 243 aaKnown RBP13.86□□□□□ -0.19
APEX1-205ENST00000553555 POLBP06746 335 aa13.86□□□□□ -0.19
APEX1-205ENST00000553555 PDHA1P08559 390 aa13.86□□□□□ -0.19
APEX1-205ENST00000553555 ALADP13716 330 aa13.86□□□□□ -0.19
APEX1-205ENST00000553555 CA4P22748 312 aa13.86□□□□□ -0.19
APEX1-205ENST00000553555 ADRA1DP25100 572 aa13.86□□□□□ -0.19
APEX1-205ENST00000553555 GALNT3Q14435 633 aa13.86□□□□□ -0.19
APEX1-205ENST00000553555 POU6F1Q14863 301 aa13.86□□□□□ -0.19
APEX1-205ENST00000553555 SMAD2Q15796 467 aaKnown RBP13.86□□□□□ -0.19
APEX1-205ENST00000553555 LEXMQ3ZCV2 418 aa13.86□□□□□ -0.19
APEX1-205ENST00000553555 PREPLQ4J6C6 727 aaPredicted RBP13.86□□□□□ -0.19
APEX1-205ENST00000553555 ARMC3Q5W041 872 aa13.86□□□□□ -0.19
APEX1-205ENST00000553555 CYS1Q717R9 158 aa13.86□□□□□ -0.19
APEX1-205ENST00000553555 TMEM135Q86UB9 458 aa13.86□□□□□ -0.19
APEX1-205ENST00000553555 OR6K2Q8NGY2 324 aa13.86□□□□□ -0.19
APEX1-205ENST00000553555 GSDMBQ8TAX9 411 aa13.86□□□□□ -0.19
APEX1-205ENST00000553555 CSGALNACT1Q8TDX6 532 aa13.86□□□□□ -0.19
APEX1-205ENST00000553555 ACSS3Q9H6R3 686 aa13.86□□□□□ -0.19
APEX1-205ENST00000553555 KCNK12Q9HB15 430 aa13.86□□□□□ -0.19
APEX1-205ENST00000553555 MRM3Q9HC36 420 aaKnown RBP13.86□□□□□ -0.19
APEX1-205ENST00000553555 HECAQ9UBI9 543 aaPredicted RBP13.86□□□□□ -0.19
APEX1-205ENST00000553555 PLA2G4CQ9UP65 541 aa13.86□□□□□ -0.19
APEX1-205ENST00000553555 SLC8A2Q9UPR5 921 aa13.86□□□□□ -0.19
APEX1-205ENST00000553555 TCRBV9S1A1TA0A576 114 aa13.86□□□□□ -0.19
APEX1-205ENST00000553555 TBC1D3BA6NDS4 549 aa13.86□□□□□ -0.19
APEX1-205ENST00000553555 TTC34A8MYJ7 566 aa13.86□□□□□ -0.19
APEX1-205ENST00000553555 USP1O94782 785 aa13.86□□□□□ -0.19
APEX1-205ENST00000553555 KAT7O95251 611 aa13.86□□□□□ -0.19
APEX1-205ENST00000553555 POP4O95707 220 aaKnown RBP13.86□□□□□ -0.19
APEX1-205ENST00000553555 GKP32189 559 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms