RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 ATG16L1Q676U5 607 aa6.83□□□□□ -1.32
PCNX1-205ENST00000553508 CREB3L2Q70SY1 520 aa6.83□□□□□ -1.32
PCNX1-205ENST00000553508 DENND6AQ8IWF6 608 aa6.83□□□□□ -1.32
PCNX1-205ENST00000553508 RBMXL3Q8N7X1 1067 aaKnown RBP6.83□□□□□ -1.32
PCNX1-205ENST00000553508 SCLT1Q96NL6 688 aa6.83□□□□□ -1.32
PCNX1-205ENST00000553508 SLC25A33Q9BSK2 321 aa6.83□□□□□ -1.32
PCNX1-205ENST00000553508 SPATS2LQ9NUQ6 558 aaKnown RBP6.83□□□□□ -1.32
PCNX1-205ENST00000553508 PCDHGB5Q9Y5G0 923 aa6.83□□□□□ -1.32
PCNX1-205ENST00000553508 PCDHGB1Q9Y5G3 927 aa6.83□□□□□ -1.32
PCNX1-205ENST00000553508 ADGRF5Q8IZF2 1346 aa6.82□□□□□ -1.32
PCNX1-205ENST00000553508 ARHGEF11O15085 1522 aa6.82□□□□□ -1.32
PCNX1-205ENST00000553508 C17orf113A0A1B0GUU1 675 aa6.82□□□□□ -1.32
PCNX1-205ENST00000553508 ARHGAP10A1A4S6 786 aa6.82□□□□□ -1.32
PCNX1-205ENST00000553508 PABPN1LA6NDY0 278 aaKnown RBP6.82□□□□□ -1.32
PCNX1-205ENST00000553508 PRSS44E7EML9 344 aa6.82□□□□□ -1.32
PCNX1-205ENST00000553508 TTKP33981 857 aa6.82□□□□□ -1.32
PCNX1-205ENST00000553508 RPL3P39023 403 aaKnown RBP6.82□□□□□ -1.32
PCNX1-205ENST00000553508 MXI1P50539 228 aa6.82□□□□□ -1.32
PCNX1-205ENST00000553508 HDAC4P56524 1084 aa6.82□□□□□ -1.32
PCNX1-205ENST00000553508 BNC1Q01954 994 aa6.82□□□□□ -1.32
PCNX1-205ENST00000553508 RUNX2Q13950 521 aa6.82□□□□□ -1.32
PCNX1-205ENST00000553508 TAF12Q16514 161 aa6.82□□□□□ -1.32
PCNX1-205ENST00000553508 WDR45BQ5MNZ6 344 aa6.82□□□□□ -1.32
PCNX1-205ENST00000553508 PRSS57Q6UWY2 283 aa6.82□□□□□ -1.32
PCNX1-205ENST00000553508 ANKRD18AQ8IVF6 992 aa6.82□□□□□ -1.32
PCNX1-205ENST00000553508 ZMIZ2Q8NF64 920 aa6.82□□□□□ -1.32
PCNX1-205ENST00000553508 EYA3Q99504 573 aa6.82□□□□□ -1.32
PCNX1-205ENST00000553508 TCF20Q9UGU0 1960 aaKnown RBP6.81□□□□□ -1.32
PCNX1-205ENST00000553508 WDR97A6NE52 1622 aa6.81□□□□□ -1.32
PCNX1-205ENST00000553508 TIMM23O14925 209 aa6.81□□□□□ -1.32
PCNX1-205ENST00000553508 ART1P52961 327 aa6.81□□□□□ -1.32
PCNX1-205ENST00000553508 RRP1P56182 461 aaKnown RBP6.81□□□□□ -1.32
PCNX1-205ENST00000553508 UBE3AQ05086 875 aa6.81□□□□□ -1.32
PCNX1-205ENST00000553508 MAP3K21Q5TCX8 1036 aa6.81□□□□□ -1.32
PCNX1-205ENST00000553508 CPOQ8IVL8 374 aa6.81□□□□□ -1.32
PCNX1-205ENST00000553508 SMRP1Q8NCR6 262 aa6.81□□□□□ -1.32
PCNX1-205ENST00000553508 RFWD2Q8NHY2 731 aa6.81□□□□□ -1.32
PCNX1-205ENST00000553508 FAM216AQ8WUB2 273 aa6.81□□□□□ -1.32
PCNX1-205ENST00000553508 FIZ1Q96SL8 496 aa6.81□□□□□ -1.32
PCNX1-205ENST00000553508 CTNNAL1Q9UBT7 734 aa6.81□□□□□ -1.32
PCNX1-205ENST00000553508 TARBP1Q13395 1621 aaKnown RBP6.8□□□□□ -1.32
PCNX1-205ENST00000553508 DYTNA2CJ06 578 aa6.8□□□□□ -1.32
PCNX1-205ENST00000553508 RGS11O94810 467 aa6.8□□□□□ -1.32
PCNX1-205ENST00000553508 CNTFP26441 200 aa6.8□□□□□ -1.32
PCNX1-205ENST00000553508 ADORA2A-AS1P86434 159 aa6.8□□□□□ -1.32
PCNX1-205ENST00000553508 NFIL3Q16649 462 aa6.8□□□□□ -1.32
PCNX1-205ENST00000553508 RETSATQ6NUM9 610 aa6.8□□□□□ -1.32
PCNX1-205ENST00000553508 CCDC105Q8IYK2 499 aa6.8□□□□□ -1.32
PCNX1-205ENST00000553508 LSM14AQ8ND56 463 aaKnown RBP6.8□□□□□ -1.32
PCNX1-205ENST00000553508 TMEM170AQ8WVE7 144 aa6.8□□□□□ -1.32
PCNX1-205ENST00000553508 TRIB2Q92519 343 aa6.8□□□□□ -1.32
PCNX1-205ENST00000553508 FAM84BQ96KN1 310 aaPredicted RBP6.8□□□□□ -1.32
PCNX1-205ENST00000553508 PHF7Q9BWX1 381 aaPredicted RBP6.8□□□□□ -1.32
PCNX1-205ENST00000553508 NUF2Q9BZD4 464 aa6.8□□□□□ -1.32
PCNX1-205ENST00000553508 TTYH1Q9H313 450 aaPredicted RBP6.8□□□□□ -1.32
PCNX1-205ENST00000553508 PEMTQ9UBM1 199 aa6.8□□□□□ -1.32
PCNX1-205ENST00000553508 NDRG3Q9UGV2 375 aa6.8□□□□□ -1.32
PCNX1-205ENST00000553508 AGO1Q9UL18 857 aaKnown RBP6.8□□□□□ -1.32
PCNX1-205ENST00000553508 HSF4Q9ULV5 492 aa6.8□□□□□ -1.32
PCNX1-205ENST00000553508 POLA1P09884 1462 aaPredicted RBP6.79□□□□□ -1.32
PCNX1-205ENST00000553508 IGLV5-52A0A0A0MRZ9 124 aa6.79□□□□□ -1.32
PCNX1-205ENST00000553508 PRR23D1E9PI22 279 aaPredicted RBP6.79□□□□□ -1.32
PCNX1-205ENST00000553508 J3KR12 359 aa6.79□□□□□ -1.32
PCNX1-205ENST00000553508 PRR23D2P0DMB1 279 aaPredicted RBP6.79□□□□□ -1.32
PCNX1-205ENST00000553508 SLC2A4P14672 509 aa6.79□□□□□ -1.32
PCNX1-205ENST00000553508 MYF6P23409 242 aa6.79□□□□□ -1.32
PCNX1-205ENST00000553508 PGM1P36871 562 aa6.79□□□□□ -1.32
PCNX1-205ENST00000553508 CXCR3P49682 368 aa6.79□□□□□ -1.32
PCNX1-205ENST00000553508 DDR1Q08345 913 aa6.79□□□□□ -1.32
PCNX1-205ENST00000553508 GRSF1Q12849 480 aaKnown RBP eCLIP6.79□□□□□ -1.32
PCNX1-205ENST00000553508 SLC39A14Q15043 492 aa6.79□□□□□ -1.32
PCNX1-205ENST00000553508 ARHGEF6Q15052 776 aa6.79□□□□□ -1.32
PCNX1-205ENST00000553508 DCAF6Q58WW2 860 aa6.79□□□□□ -1.32
PCNX1-205ENST00000553508 SLC22A25Q6T423 547 aa6.79□□□□□ -1.32
PCNX1-205ENST00000553508 C17orf99Q6UX52 265 aa6.79□□□□□ -1.32
PCNX1-205ENST00000553508 C18orf65Q6ZTR6 163 aa6.79□□□□□ -1.32
PCNX1-205ENST00000553508 BBS12Q6ZW61 710 aa6.79□□□□□ -1.32
PCNX1-205ENST00000553508 ARMC9Q7Z3E5 817 aa6.79□□□□□ -1.32
PCNX1-205ENST00000553508 ARRDC2Q8TBH0 407 aa6.79□□□□□ -1.32
PCNX1-205ENST00000553508 RTP4Q96DX8 246 aa6.79□□□□□ -1.32
PCNX1-205ENST00000553508 BABAM1Q9NWV8 329 aa6.79□□□□□ -1.32
PCNX1-205ENST00000553508 ANKRD10Q9NXR5 420 aa6.79□□□□□ -1.32
PCNX1-205ENST00000553508 IL1RAPL1Q9NZN1 696 aa6.79□□□□□ -1.32
PCNX1-205ENST00000553508 OR6C3Q9NZP0 311 aa6.79□□□□□ -1.32
PCNX1-205ENST00000553508 PAM16Q9Y3D7 125 aa6.79□□□□□ -1.32
PCNX1-205ENST00000553508 CHD1O14646 1710 aa6.79□□□□□ -1.32
PCNX1-205ENST00000553508 SRD5A1P18405 259 aa6.78□□□□□ -1.32
PCNX1-205ENST00000553508 PIGAP37287 484 aa6.78□□□□□ -1.32
PCNX1-205ENST00000553508 PPM1FP49593 454 aaPredicted RBP6.78□□□□□ -1.32
PCNX1-205ENST00000553508 CCR5P51681 352 aa6.78□□□□□ -1.32
PCNX1-205ENST00000553508 SEC61A1P61619 476 aaKnown RBP6.78□□□□□ -1.32
PCNX1-205ENST00000553508 CHRNDQ07001 517 aa6.78□□□□□ -1.32
PCNX1-205ENST00000553508 KIF5AQ12840 1032 aa6.78□□□□□ -1.32
PCNX1-205ENST00000553508 ZNF667Q5HYK9 610 aa6.78□□□□□ -1.32
PCNX1-205ENST00000553508 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.78□□□□□ -1.32
PCNX1-205ENST00000553508 C16orf82Q7Z2V1 217 aa6.78□□□□□ -1.32
PCNX1-205ENST00000553508 FAM160B2Q86V87 743 aa6.78□□□□□ -1.32
PCNX1-205ENST00000553508 KIAA2013Q8IYS2 634 aa6.78□□□□□ -1.32
PCNX1-205ENST00000553508 GCC1Q96CN9 775 aa6.78□□□□□ -1.32
PCNX1-205ENST00000553508 ZC3HAV1LQ96H79 300 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms