RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 WNT1P04628 370 aa15.51■□□□□ 0.07
SHMT2-204ENST00000553324 CD48P09326 243 aa15.51■□□□□ 0.07
SHMT2-204ENST00000553324 TIMP2P16035 220 aa15.51■□□□□ 0.07
SHMT2-204ENST00000553324 KDELR1P24390 212 aa15.51■□□□□ 0.07
SHMT2-204ENST00000553324 SERPINA4P29622 427 aa15.51■□□□□ 0.07
SHMT2-204ENST00000553324 GJC1P36383 396 aa15.51■□□□□ 0.07
SHMT2-204ENST00000553324 ARRB1P49407 418 aaPredicted RBP15.51■□□□□ 0.07
SHMT2-204ENST00000553324 CCT8P50990 548 aa15.51■□□□□ 0.07
SHMT2-204ENST00000553324 HADHBP55084 474 aaKnown RBP15.51■□□□□ 0.07
SHMT2-204ENST00000553324 NXPH1P58417 271 aa15.51■□□□□ 0.07
SHMT2-204ENST00000553324 TAS2R40P59535 323 aa15.51■□□□□ 0.07
SHMT2-204ENST00000553324 BCL2L1Q07817 233 aa15.51■□□□□ 0.07
SHMT2-204ENST00000553324 MMRN1Q13201 1228 aa15.51■□□□□ 0.07
SHMT2-204ENST00000553324 ZNF235Q14590 738 aa15.51■□□□□ 0.07
SHMT2-204ENST00000553324 PAFAH1B3Q15102 231 aaKnown RBP15.51■□□□□ 0.07
SHMT2-204ENST00000553324 INAVAQ3KP66 663 aa15.51■□□□□ 0.07
SHMT2-204ENST00000553324 RALGPS1Q5JS13 557 aa15.51■□□□□ 0.07
SHMT2-204ENST00000553324 N4BP2L1Q5TBK1 243 aaPredicted RBP15.51■□□□□ 0.07
SHMT2-204ENST00000553324 MARC1Q5VT66 337 aa15.51■□□□□ 0.07
SHMT2-204ENST00000553324 TIGD7Q6NT04 549 aaPredicted RBP15.51■□□□□ 0.07
SHMT2-204ENST00000553324 ARHGAP36Q6ZRI8 547 aa15.51■□□□□ 0.07
SHMT2-204ENST00000553324 NAXDQ8IW45 347 aa15.51■□□□□ 0.07
SHMT2-204ENST00000553324 TMEM145Q8NBT3 493 aa15.51■□□□□ 0.07
SHMT2-204ENST00000553324 PCDH19Q8TAB3 1148 aa15.51■□□□□ 0.07
SHMT2-204ENST00000553324 SETD7Q8WTS6 366 aaKnown RBP15.51■□□□□ 0.07
SHMT2-204ENST00000553324 VOPP1Q96AW1 172 aa15.51■□□□□ 0.07
SHMT2-204ENST00000553324 FAF2Q96CS3 445 aa15.51■□□□□ 0.07
SHMT2-204ENST00000553324 EXOC2Q96KP1 924 aa15.51■□□□□ 0.07
SHMT2-204ENST00000553324 C1QTNF7Q9BXJ2 289 aa15.51■□□□□ 0.07
SHMT2-204ENST00000553324 IL21RQ9HBE5 538 aa15.51■□□□□ 0.07
SHMT2-204ENST00000553324 DDX56Q9NY93 547 aaKnown RBP15.51■□□□□ 0.07
SHMT2-204ENST00000553324 IMPACTQ9P2X3 320 aa15.51■□□□□ 0.07
SHMT2-204ENST00000553324 ZFR2Q9UPR6 939 aaKnown RBP15.51■□□□□ 0.07
SHMT2-204ENST00000553324 FNDC3AQ9Y2H6 1198 aaKnown RBP15.51■□□□□ 0.07
SHMT2-204ENST00000553324 PCDHA13Q9Y5I0 950 aa15.51■□□□□ 0.07
SHMT2-204ENST00000553324 EPN1Q9Y6I3 576 aaPredicted RBP15.51■□□□□ 0.07
SHMT2-204ENST00000553324 A0A0A6YYK5 440 aaPredicted RBP15.5■□□□□ 0.07
SHMT2-204ENST00000553324 A0A1B0GTQ1 180 aa15.5■□□□□ 0.07
SHMT2-204ENST00000553324 WNT9AO14904 365 aa15.5■□□□□ 0.07
SHMT2-204ENST00000553324 AREL1O15033 823 aa15.5■□□□□ 0.07
SHMT2-204ENST00000553324 INSIG1O15503 277 aa15.5■□□□□ 0.07
SHMT2-204ENST00000553324 SH3BP5O60239 455 aa15.5■□□□□ 0.07
SHMT2-204ENST00000553324 ZFXP17010 805 aaPredicted RBP15.5■□□□□ 0.07
SHMT2-204ENST00000553324 RXRGP48443 463 aa15.5■□□□□ 0.07
SHMT2-204ENST00000553324 SCNN1BP51168 640 aa15.5■□□□□ 0.07
SHMT2-204ENST00000553324 AP1S1P61966 158 aa15.5■□□□□ 0.07
SHMT2-204ENST00000553324 SLC10A7Q0GE19 358 aa15.5■□□□□ 0.07
SHMT2-204ENST00000553324 UGP2Q16851 508 aa15.5■□□□□ 0.07
SHMT2-204ENST00000553324 SEL1L3Q68CR1 1132 aa15.5■□□□□ 0.07
SHMT2-204ENST00000553324 ERAP2Q6P179 960 aa15.5■□□□□ 0.07
SHMT2-204ENST00000553324 LAYNQ6UX15 382 aa15.5■□□□□ 0.07
SHMT2-204ENST00000553324 RHOT1Q8IXI2 618 aa15.5■□□□□ 0.07
SHMT2-204ENST00000553324 NETO2Q8NC67 525 aa15.5■□□□□ 0.07
SHMT2-204ENST00000553324 CXorf40AQ8TE69 158 aa15.5■□□□□ 0.07
SHMT2-204ENST00000553324 KLK6Q92876 244 aa15.5■□□□□ 0.07
SHMT2-204ENST00000553324 FATE1Q969F0 183 aa15.5■□□□□ 0.07
SHMT2-204ENST00000553324 CDC6Q99741 560 aa15.5■□□□□ 0.07
SHMT2-204ENST00000553324 C1QTNF2Q9BXJ5 285 aa15.5■□□□□ 0.07
SHMT2-204ENST00000553324 CACNA1AO00555 2505 aa15.5■□□□□ 0.07
SHMT2-204ENST00000553324 PCDH15Q96QU1 1955 aa15.49■□□□□ 0.07
SHMT2-204ENST00000553324 TSPAN11A1L157 253 aa15.49■□□□□ 0.07
SHMT2-204ENST00000553324 IGLON5A6NGN9 336 aa15.49■□□□□ 0.07
SHMT2-204ENST00000553324 GOLGA6L6A8MZA4 724 aa15.49■□□□□ 0.07
SHMT2-204ENST00000553324 H0Y8X5 98 aa15.49■□□□□ 0.07
SHMT2-204ENST00000553324 KCNK3O14649 394 aa15.49■□□□□ 0.07
SHMT2-204ENST00000553324 SPOPO43791 374 aa15.49■□□□□ 0.07
SHMT2-204ENST00000553324 BUB1BO60566 1050 aaPredicted RBP15.49■□□□□ 0.07
SHMT2-204ENST00000553324 TM7SF2O76062 418 aa15.49■□□□□ 0.07
SHMT2-204ENST00000553324 NDUFA10O95299 355 aa15.49■□□□□ 0.07
SHMT2-204ENST00000553324 PIGNO95427 931 aa15.49■□□□□ 0.07
SHMT2-204ENST00000553324 PEX11BO96011 259 aa15.49■□□□□ 0.07
SHMT2-204ENST00000553324 PRLRP16471 622 aa15.49■□□□□ 0.07
SHMT2-204ENST00000553324 FECHP22830 423 aa15.49■□□□□ 0.07
SHMT2-204ENST00000553324 CES1P23141 567 aa15.49■□□□□ 0.07
SHMT2-204ENST00000553324 CCNCP24863 283 aa15.49■□□□□ 0.07
SHMT2-204ENST00000553324 NFKBIAP25963 317 aa15.49■□□□□ 0.07
SHMT2-204ENST00000553324 GARSP41250 739 aaKnown RBP15.49■□□□□ 0.07
SHMT2-204ENST00000553324 ABL2P42684 1182 aa15.49■□□□□ 0.07
SHMT2-204ENST00000553324 GRK6P43250 576 aa15.49■□□□□ 0.07
SHMT2-204ENST00000553324 GALNT2Q10471 571 aa15.49■□□□□ 0.07
SHMT2-204ENST00000553324 TRIP6Q15654 476 aaKnown RBP15.49■□□□□ 0.07
SHMT2-204ENST00000553324 IFI16Q16666 785 aaKnown RBP15.49■□□□□ 0.07
SHMT2-204ENST00000553324 NCBP2-AS2Q69YL0 99 aa15.49■□□□□ 0.07
SHMT2-204ENST00000553324 TP53INP2Q8IXH6 220 aa15.49■□□□□ 0.07
SHMT2-204ENST00000553324 PAF1Q8N7H5 531 aa15.49■□□□□ 0.07
SHMT2-204ENST00000553324 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.49■□□□□ 0.07
SHMT2-204ENST00000553324 RAPGEF5Q92565 580 aa15.49■□□□□ 0.07
SHMT2-204ENST00000553324 ZNF830Q96NB3 372 aaPredicted RBP15.49■□□□□ 0.07
SHMT2-204ENST00000553324 TSGA13Q96PP4 275 aa15.49■□□□□ 0.07
SHMT2-204ENST00000553324 RNF157Q96PX1 679 aa15.49■□□□□ 0.07
SHMT2-204ENST00000553324 AMACRQ9UHK6 382 aa15.49■□□□□ 0.07
SHMT2-204ENST00000553324 LRRD1A4D1F6 860 aa15.48■□□□□ 0.07
SHMT2-204ENST00000553324 CFAP69A5D8W1 941 aa15.48■□□□□ 0.07
SHMT2-204ENST00000553324 A6NNZ2 444 aa15.48■□□□□ 0.07
SHMT2-204ENST00000553324 TOR1BO14657 336 aa15.48■□□□□ 0.07
SHMT2-204ENST00000553324 FPGTO14772 594 aa15.48■□□□□ 0.07
SHMT2-204ENST00000553324 GIPC1O14908 333 aa15.48■□□□□ 0.07
SHMT2-204ENST00000553324 MATN3O15232 486 aa15.48■□□□□ 0.07
SHMT2-204ENST00000553324 SOCS5O75159 536 aa15.48■□□□□ 0.07
SHMT2-204ENST00000553324 TRIM16O95361 564 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms