RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 DPYSQ14117 519 aa13.11□□□□□ -0.31
ACTN1-207ENST00000553290 RFTN1Q14699 578 aaPredicted RBP13.11□□□□□ -0.31
ACTN1-207ENST00000553290 CCDC122Q5T0U0 273 aa13.11□□□□□ -0.31
ACTN1-207ENST00000553290 PTAR1Q7Z6K3 402 aaPredicted RBP13.11□□□□□ -0.31
ACTN1-207ENST00000553290 ARHGAP12Q8IWW6 846 aa13.11□□□□□ -0.31
ACTN1-207ENST00000553290 NETO2Q8NC67 525 aa13.11□□□□□ -0.31
ACTN1-207ENST00000553290 CXorf40AQ8TE69 158 aa13.11□□□□□ -0.31
ACTN1-207ENST00000553290 TEKT4Q8WW24 435 aa13.11□□□□□ -0.31
ACTN1-207ENST00000553290 EXOC2Q96KP1 924 aa13.11□□□□□ -0.31
ACTN1-207ENST00000553290 TUBGCP5Q96RT8 1024 aa13.11□□□□□ -0.31
ACTN1-207ENST00000553290 NUP85Q9BW27 656 aa13.11□□□□□ -0.31
ACTN1-207ENST00000553290 GGT7Q9UJ14 662 aa13.11□□□□□ -0.31
ACTN1-207ENST00000553290 ANAPC7Q9UJX3 599 aa13.11□□□□□ -0.31
ACTN1-207ENST00000553290 ITM2BQ9Y287 266 aa13.11□□□□□ -0.31
ACTN1-207ENST00000553290 PLXNB3Q9ULL4 1909 aa13.1□□□□□ -0.31
ACTN1-207ENST00000553290 POM121BA6NF01 834 aa13.1□□□□□ -0.31
ACTN1-207ENST00000553290 MYO1FO00160 1098 aa13.1□□□□□ -0.31
ACTN1-207ENST00000553290 DFFAO00273 331 aa13.1□□□□□ -0.31
ACTN1-207ENST00000553290 RAD51BO15315 384 aa13.1□□□□□ -0.31
ACTN1-207ENST00000553290 INSIG1O15503 277 aa13.1□□□□□ -0.31
ACTN1-207ENST00000553290 SPINT1O43278 529 aa13.1□□□□□ -0.31
ACTN1-207ENST00000553290 SDC3O75056 442 aa13.1□□□□□ -0.31
ACTN1-207ENST00000553290 RARAP10276 462 aa13.1□□□□□ -0.31
ACTN1-207ENST00000553290 TIMP2P16035 220 aa13.1□□□□□ -0.31
ACTN1-207ENST00000553290 IL1R2P27930 398 aa13.1□□□□□ -0.31
ACTN1-207ENST00000553290 IL10RBQ08334 325 aa13.1□□□□□ -0.31
ACTN1-207ENST00000553290 NSUN2Q08J23 767 aaKnown RBP eCLIP13.1□□□□□ -0.31
ACTN1-207ENST00000553290 ELP6Q0PNE2 266 aa13.1□□□□□ -0.31
ACTN1-207ENST00000553290 TRIM14Q14142 442 aa13.1□□□□□ -0.31
ACTN1-207ENST00000553290 SMAD1Q15797 465 aaKnown RBP13.1□□□□□ -0.31
ACTN1-207ENST00000553290 SMTNL2Q2TAL5 461 aa13.1□□□□□ -0.31
ACTN1-207ENST00000553290 HS1BP3Q53T59 392 aa13.1□□□□□ -0.31
ACTN1-207ENST00000553290 CCDC157Q569K6 752 aa13.1□□□□□ -0.31
ACTN1-207ENST00000553290 SLC22A18ASQ8N1D0 253 aa13.1□□□□□ -0.31
ACTN1-207ENST00000553290 HSPH1Q92598 858 aa13.1□□□□□ -0.31
ACTN1-207ENST00000553290 ZNF641Q96N77 438 aaPredicted RBP13.1□□□□□ -0.31
ACTN1-207ENST00000553290 ZNF599Q96NL3 588 aa13.1□□□□□ -0.31
ACTN1-207ENST00000553290 KLF6Q99612 283 aaPredicted RBP13.1□□□□□ -0.31
ACTN1-207ENST00000553290 C1QTNF7Q9BXJ2 289 aa13.1□□□□□ -0.31
ACTN1-207ENST00000553290 SUV39H2Q9H5I1 410 aa13.1□□□□□ -0.31
ACTN1-207ENST00000553290 SP110Q9HB58 689 aa13.1□□□□□ -0.31
ACTN1-207ENST00000553290 GPR27Q9NS67 375 aa13.1□□□□□ -0.31
ACTN1-207ENST00000553290 ZMIZ1Q9ULJ6 1067 aa13.1□□□□□ -0.31
ACTN1-207ENST00000553290 ARID1BQ8NFD5 2236 aaPredicted RBP13.1□□□□□ -0.31
ACTN1-207ENST00000553290 ASPMQ8IZT6 3477 aa13.09□□□□□ -0.31
ACTN1-207ENST00000553290 SPTY2D1-AS1A0A0U1RR47 76 aa13.09□□□□□ -0.31
ACTN1-207ENST00000553290 TSPAN11A1L157 253 aa13.09□□□□□ -0.31
ACTN1-207ENST00000553290 RFPL3O75679 317 aa13.09□□□□□ -0.31
ACTN1-207ENST00000553290 TM7SF2O76062 418 aa13.09□□□□□ -0.31
ACTN1-207ENST00000553290 PIGNO95427 931 aa13.09□□□□□ -0.31
ACTN1-207ENST00000553290 TCF4P15884 667 aa13.09□□□□□ -0.31
ACTN1-207ENST00000553290 CKMT2P17540 419 aa13.09□□□□□ -0.31
ACTN1-207ENST00000553290 DGKAP23743 735 aa13.09□□□□□ -0.31
ACTN1-207ENST00000553290 RENBPP51606 427 aa13.09□□□□□ -0.31
ACTN1-207ENST00000553290 HNRNPKP61978 463 aaKnown RBP eCLIP13.09□□□□□ -0.31
ACTN1-207ENST00000553290 DNAJC3Q13217 504 aa13.09□□□□□ -0.31
ACTN1-207ENST00000553290 ZNF211Q13398 564 aaPredicted RBP13.09□□□□□ -0.31
ACTN1-207ENST00000553290 ILKQ13418 452 aa13.09□□□□□ -0.31
ACTN1-207ENST00000553290 UGP2Q16851 508 aa13.09□□□□□ -0.31
ACTN1-207ENST00000553290 TMEM52BQ4KMG9 183 aa13.09□□□□□ -0.31
ACTN1-207ENST00000553290 LRRC73Q5JTD7 316 aa13.09□□□□□ -0.31
ACTN1-207ENST00000553290 CFAP58Q5T655 872 aa13.09□□□□□ -0.31
ACTN1-207ENST00000553290 TMCO4Q5TGY1 634 aa13.09□□□□□ -0.31
ACTN1-207ENST00000553290 SPECC1LQ69YQ0 1117 aa13.09□□□□□ -0.31
ACTN1-207ENST00000553290 BRAT1Q6PJG6 821 aa13.09□□□□□ -0.31
ACTN1-207ENST00000553290 TMCO3Q6UWJ1 677 aa13.09□□□□□ -0.31
ACTN1-207ENST00000553290 POLNQ7Z5Q5 900 aa13.09□□□□□ -0.31
ACTN1-207ENST00000553290 SRLQ86TD4 932 aa13.09□□□□□ -0.31
ACTN1-207ENST00000553290 SLC25A45Q8N413 288 aa13.09□□□□□ -0.31
ACTN1-207ENST00000553290 NPWQ8N729 165 aa13.09□□□□□ -0.31
ACTN1-207ENST00000553290 ZCCHC14Q8WYQ9 949 aaKnown RBP13.09□□□□□ -0.31
ACTN1-207ENST00000553290 TSC1Q92574 1164 aa13.09□□□□□ -0.31
ACTN1-207ENST00000553290 CINPQ9BW66 212 aaPredicted RBP13.09□□□□□ -0.31
ACTN1-207ENST00000553290 TSPY26PQ9H489 355 aa13.09□□□□□ -0.31
ACTN1-207ENST00000553290 ATP13A3Q9H7F0 1226 aa13.09□□□□□ -0.31
ACTN1-207ENST00000553290 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.09□□□□□ -0.31
ACTN1-207ENST00000553290 IPO11Q9UI26 975 aaKnown RBP13.09□□□□□ -0.31
ACTN1-207ENST00000553290 TDRD6O60522 2096 aaKnown RBP13.09□□□□□ -0.31
ACTN1-207ENST00000553290 IGF2RP11717 2491 aa13.08□□□□□ -0.31
ACTN1-207ENST00000553290 NEMP2A6NFY4 417 aa13.08□□□□□ -0.32
ACTN1-207ENST00000553290 H3BM21 787 aa13.08□□□□□ -0.32
ACTN1-207ENST00000553290 TOR1BO14657 336 aa13.08□□□□□ -0.32
ACTN1-207ENST00000553290 BUB1BO60566 1050 aaPredicted RBP13.08□□□□□ -0.32
ACTN1-207ENST00000553290 MMP20O60882 483 aa13.08□□□□□ -0.32
ACTN1-207ENST00000553290 PIAS2O75928 621 aa13.08□□□□□ -0.32
ACTN1-207ENST00000553290 KRT37O76014 449 aa13.08□□□□□ -0.32
ACTN1-207ENST00000553290 ALPPL2P10696 532 aa13.08□□□□□ -0.32
ACTN1-207ENST00000553290 AMPD1P23109 780 aa13.08□□□□□ -0.32
ACTN1-207ENST00000553290 SERPINA4P29622 427 aa13.08□□□□□ -0.32
ACTN1-207ENST00000553290 SERPINB6P35237 376 aa13.08□□□□□ -0.32
ACTN1-207ENST00000553290 EIF4A3P38919 411 aaKnown RBP13.08□□□□□ -0.32
ACTN1-207ENST00000553290 ACADVLP49748 655 aa13.08□□□□□ -0.32
ACTN1-207ENST00000553290 PFN3P60673 137 aa13.08□□□□□ -0.32
ACTN1-207ENST00000553290 YPEL5P62699 121 aa13.08□□□□□ -0.32
ACTN1-207ENST00000553290 SLC25A11Q02978 314 aaKnown RBP13.08□□□□□ -0.32
ACTN1-207ENST00000553290 PTK2BQ14289 1009 aa13.08□□□□□ -0.32
ACTN1-207ENST00000553290 FZD2Q14332 565 aa13.08□□□□□ -0.32
ACTN1-207ENST00000553290 HADHQ16836 314 aaKnown RBP13.08□□□□□ -0.32
ACTN1-207ENST00000553290 TSR1Q2NL82 804 aaKnown RBP13.08□□□□□ -0.32
ACTN1-207ENST00000553290 PROX2Q3B8N5 592 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms