RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 INTS2Q9H0H0 1204 aaKnown RBP11.92□□□□□ -0.5
SNRPF-205ENST00000553192 TBC1D30Q9Y2I9 924 aa11.92□□□□□ -0.5
SNRPF-205ENST00000553192 PRRC2CQ9Y520 2896 aaKnown RBP11.91□□□□□ -0.5
SNRPF-205ENST00000553192 TOR1BO14657 336 aa11.91□□□□□ -0.5
SNRPF-205ENST00000553192 AREL1O15033 823 aa11.91□□□□□ -0.5
SNRPF-205ENST00000553192 DIAPH2O60879 1101 aa11.91□□□□□ -0.5
SNRPF-205ENST00000553192 NR3C1P04150 777 aa11.91□□□□□ -0.5
SNRPF-205ENST00000553192 THRAP10827 490 aa11.91□□□□□ -0.5
SNRPF-205ENST00000553192 MPSTP25325 297 aa11.91□□□□□ -0.5
SNRPF-205ENST00000553192 PEX5P50542 639 aa11.91□□□□□ -0.5
SNRPF-205ENST00000553192 CLCN6P51797 869 aa11.91□□□□□ -0.5
SNRPF-205ENST00000553192 COPB1P53618 953 aaKnown RBP11.91□□□□□ -0.5
SNRPF-205ENST00000553192 PMS2P54278 862 aa11.91□□□□□ -0.5
SNRPF-205ENST00000553192 SRP54P61011 504 aaKnown RBP11.91□□□□□ -0.5
SNRPF-205ENST00000553192 DPYDQ12882 1025 aa11.91□□□□□ -0.5
SNRPF-205ENST00000553192 TRA2AQ13595 282 aaKnown RBP eCLIP11.91□□□□□ -0.55e-6■□□□□ 8.9
SNRPF-205ENST00000553192 NR1D2Q14995 579 aa11.91□□□□□ -0.5
SNRPF-205ENST00000553192 IRF4Q15306 451 aa11.91□□□□□ -0.5
SNRPF-205ENST00000553192 CLPPQ16740 277 aaPredicted RBP11.91□□□□□ -0.5
SNRPF-205ENST00000553192 RABGAP1LQ5R372 815 aa11.91□□□□□ -0.5
SNRPF-205ENST00000553192 ZNF438Q7Z4V0 828 aa11.91□□□□□ -0.5
SNRPF-205ENST00000553192 BRAPQ7Z569 592 aa11.91□□□□□ -0.5
SNRPF-205ENST00000553192 C17orf82Q86X59 251 aaPredicted RBP11.91□□□□□ -0.5
SNRPF-205ENST00000553192 TTC39CQ8N584 583 aa11.91□□□□□ -0.5
SNRPF-205ENST00000553192 Q8NA96 180 aa11.91□□□□□ -0.5
SNRPF-205ENST00000553192 TTC13Q8NBP0 860 aa11.91□□□□□ -0.5
SNRPF-205ENST00000553192 CCDC112Q8NEF3 446 aa11.91□□□□□ -0.5
SNRPF-205ENST00000553192 FAM46DQ8NEK8 389 aa11.91□□□□□ -0.5
SNRPF-205ENST00000553192 GOLGA5Q8TBA6 731 aa11.91□□□□□ -0.5
SNRPF-205ENST00000553192 TFAP2BQ92481 460 aa11.91□□□□□ -0.5
SNRPF-205ENST00000553192 FAXDC2Q96IV6 333 aa11.91□□□□□ -0.5
SNRPF-205ENST00000553192 C5orf34Q96MH7 638 aa11.91□□□□□ -0.5
SNRPF-205ENST00000553192 C7orf25Q9BPX7 421 aa11.91□□□□□ -0.5
SNRPF-205ENST00000553192 ZSWIM1Q9BR11 485 aa11.91□□□□□ -0.5
SNRPF-205ENST00000553192 TRIM55Q9BYV6 548 aa11.91□□□□□ -0.5
SNRPF-205ENST00000553192 LRRC27Q9C0I9 530 aa11.91□□□□□ -0.5
SNRPF-205ENST00000553192 MIS12Q9H081 205 aa11.91□□□□□ -0.5
SNRPF-205ENST00000553192 KCTD10Q9H3F6 313 aa11.91□□□□□ -0.5
SNRPF-205ENST00000553192 ZSCAN16Q9H4T2 348 aaPredicted RBP11.91□□□□□ -0.5
SNRPF-205ENST00000553192 TMEM9Q9P0T7 183 aa11.91□□□□□ -0.5
SNRPF-205ENST00000553192 OAS3Q9Y6K5 1087 aaKnown RBP11.91□□□□□ -0.5
SNRPF-205ENST00000553192 B4DGG1 531 aa11.9□□□□□ -0.5
SNRPF-205ENST00000553192 MMP20O60882 483 aa11.9□□□□□ -0.5
SNRPF-205ENST00000553192 CD19P15391 556 aa11.9□□□□□ -0.5
SNRPF-205ENST00000553192 HOXB4P17483 251 aaPredicted RBP11.9□□□□□ -0.5
SNRPF-205ENST00000553192 PDCP20941 246 aa11.9□□□□□ -0.5
SNRPF-205ENST00000553192 GKP32189 559 aa11.9□□□□□ -0.5
SNRPF-205ENST00000553192 CSF2RBP32927 897 aa11.9□□□□□ -0.5
SNRPF-205ENST00000553192 GGCXP38435 758 aa11.9□□□□□ -0.5
SNRPF-205ENST00000553192 MAZP56270 477 aaKnown RBP11.9□□□□□ -0.5
SNRPF-205ENST00000553192 KRT83P78385 493 aa11.9□□□□□ -0.5
SNRPF-205ENST00000553192 AUHQ13825 339 aaKnown RBP11.9□□□□□ -0.5
SNRPF-205ENST00000553192 ERV3-1Q14264 604 aa11.9□□□□□ -0.5
SNRPF-205ENST00000553192 NFATC4Q14934 902 aa11.9□□□□□ -0.5
SNRPF-205ENST00000553192 TESK1Q15569 626 aa11.9□□□□□ -0.5
SNRPF-205ENST00000553192 CEP135Q66GS9 1140 aa11.9□□□□□ -0.5
SNRPF-205ENST00000553192 SPECC1LQ69YQ0 1117 aa11.9□□□□□ -0.5
SNRPF-205ENST00000553192 FAM186BQ8IYM0 893 aa11.9□□□□□ -0.5
SNRPF-205ENST00000553192 NRSN1Q8IZ57 195 aa11.9□□□□□ -0.5
SNRPF-205ENST00000553192 CCL4L1Q8NHW4 92 aa11.9□□□□□ -0.5
SNRPF-205ENST00000553192 RPRD1AQ96P16 312 aaPredicted RBP11.9□□□□□ -0.5
SNRPF-205ENST00000553192 CTRCQ99895 268 aa11.9□□□□□ -0.5
SNRPF-205ENST00000553192 HEPHQ9BQS7 1158 aa11.9□□□□□ -0.5
SNRPF-205ENST00000553192 MMRN2Q9H8L6 949 aa11.9□□□□□ -0.5
SNRPF-205ENST00000553192 MLXIPLQ9NP71 852 aa11.9□□□□□ -0.5
SNRPF-205ENST00000553192 LUZP4Q9P127 313 aa11.9□□□□□ -0.5
SNRPF-205ENST00000553192 POLHQ9Y253 713 aa11.9□□□□□ -0.5
SNRPF-205ENST00000553192 TMEM184BQ9Y519 407 aaPredicted RBP11.9□□□□□ -0.5
SNRPF-205ENST00000553192 CROCCQ5TZA2 2017 aa11.89□□□□□ -0.51
SNRPF-205ENST00000553192 TNRC6AQ8NDV7 1962 aaKnown RBP11.89□□□□□ -0.51
SNRPF-205ENST00000553192 A0A0D9SEW6 157 aa11.89□□□□□ -0.51
SNRPF-205ENST00000553192 C16orf96A6NNT2 1141 aa11.89□□□□□ -0.51
SNRPF-205ENST00000553192 NEMP1O14524 444 aa11.89□□□□□ -0.51
SNRPF-205ENST00000553192 STK17BO94768 372 aa11.89□□□□□ -0.51
SNRPF-205ENST00000553192 CBX6O95503 412 aa11.89□□□□□ -0.51
SNRPF-205ENST00000553192 DLGAP3O95886 979 aa11.89□□□□□ -0.51
SNRPF-205ENST00000553192 TRUB2O95900 331 aaKnown RBP11.89□□□□□ -0.51
SNRPF-205ENST00000553192 VDRP11473 427 aa11.89□□□□□ -0.51
SNRPF-205ENST00000553192 ITIH2P19823 946 aa11.89□□□□□ -0.51
SNRPF-205ENST00000553192 BMP6P22004 513 aa11.89□□□□□ -0.51
SNRPF-205ENST00000553192 ALDH4A1P30038 563 aa11.89□□□□□ -0.51
SNRPF-205ENST00000553192 CSTF2P33240 577 aaKnown RBP eCLIP11.89□□□□□ -0.51
SNRPF-205ENST00000553192 STAT5AP42229 794 aa11.89□□□□□ -0.51
SNRPF-205ENST00000553192 CCNHP51946 323 aaPredicted RBP11.89□□□□□ -0.51
SNRPF-205ENST00000553192 RAB15P59190 212 aa11.89□□□□□ -0.51
SNRPF-205ENST00000553192 ZXDCQ2QGD7 858 aaPredicted RBP11.89□□□□□ -0.51
SNRPF-205ENST00000553192 NKAIN2Q5VXU1 208 aa11.89□□□□□ -0.51
SNRPF-205ENST00000553192 SP5Q6BEB4 398 aaPredicted RBP11.89□□□□□ -0.51
SNRPF-205ENST00000553192 FOXR2Q6PJQ5 311 aa11.89□□□□□ -0.51
SNRPF-205ENST00000553192 LCLAT1Q6UWP7 414 aa11.89□□□□□ -0.51
SNRPF-205ENST00000553192 KDELC2Q7Z4H8 507 aa11.89□□□□□ -0.51
SNRPF-205ENST00000553192 TAF8Q7Z7C8 310 aa11.89□□□□□ -0.51
SNRPF-205ENST00000553192 FAM129CQ86XR2 697 aa11.89□□□□□ -0.51
SNRPF-205ENST00000553192 APLFQ8IW19 511 aaPredicted RBP11.89□□□□□ -0.51
SNRPF-205ENST00000553192 ATP6V0D2Q8N8Y2 350 aa11.89□□□□□ -0.51
SNRPF-205ENST00000553192 OR4D9Q8NGE8 314 aa11.89□□□□□ -0.51
SNRPF-205ENST00000553192 OR1E3Q8WZA6 343 aa11.89□□□□□ -0.51
SNRPF-205ENST00000553192 FUBP1Q96AE4 644 aaKnown RBP11.89□□□□□ -0.51
SNRPF-205ENST00000553192 RAB7BQ96AH8 199 aa11.89□□□□□ -0.51
SNRPF-205ENST00000553192 C19orf60Q96EN9 201 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms