RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 SQLEQ14534 574 aa11.69□□□□□ -0.54
PPFIA2-227ENST00000552948 MAPK11Q15759 364 aa11.69□□□□□ -0.54
PPFIA2-227ENST00000552948 AGAP9Q5VTM2 703 aa11.69□□□□□ -0.54
PPFIA2-227ENST00000552948 SYPL2Q5VXT5 272 aa11.69□□□□□ -0.54
PPFIA2-227ENST00000552948 CNSTQ6PJW8 725 aa11.69□□□□□ -0.54
PPFIA2-227ENST00000552948 KCTD8Q6ZWB6 473 aa11.69□□□□□ -0.54
PPFIA2-227ENST00000552948 CTU1Q7Z7A3 348 aaKnown RBP11.69□□□□□ -0.54
PPFIA2-227ENST00000552948 LDB1Q86U70 411 aaPredicted RBP11.69□□□□□ -0.54
PPFIA2-227ENST00000552948 CHERPQ8IWX8 916 aaKnown RBP11.69□□□□□ -0.54
PPFIA2-227ENST00000552948 ANKRD52Q8NB46 1076 aa11.69□□□□□ -0.54
PPFIA2-227ENST00000552948 CHST13Q8NET6 341 aa11.69□□□□□ -0.54
PPFIA2-227ENST00000552948 ZC3H15Q8WU90 426 aaKnown RBP11.69□□□□□ -0.54
PPFIA2-227ENST00000552948 GPATCH1Q9BRR8 931 aaKnown RBP11.69□□□□□ -0.54
PPFIA2-227ENST00000552948 PDZD7Q9H5P4 517 aa11.69□□□□□ -0.54
PPFIA2-227ENST00000552948 GOLGA2P5Q9HBQ8 144 aa11.69□□□□□ -0.54
PPFIA2-227ENST00000552948 NSMCE4AQ9NXX6 385 aa11.69□□□□□ -0.54
PPFIA2-227ENST00000552948 MAGEB16A2A368 324 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 CCL22O00626 93 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 DPYSL4O14531 572 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 MTHFD1P11586 935 aaKnown RBP11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 HMGB2P26583 209 aaKnown RBP11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 ZBED5Q49AG3 693 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 SCIMPQ6UWF3 145 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 ZC3HC1Q86WB0 502 aaKnown RBP11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 ZDHHC17Q8IUH5 632 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 RIN3Q8TB24 985 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 PLEKHA8Q96JA3 519 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 C9orf16Q9BUW7 83 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 KLHL25Q9H0H3 589 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 RBM38Q9H0Z9 239 aaKnown RBP11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 MTMR10Q9NXD2 777 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 ERAP1Q9NZ08 941 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 BLOC1S6Q9UL45 172 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 NRAPQ86VF7 1730 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 C19orf81C9J6K1 198 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 PTGES3LE9PB15 166 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 ZNF286BP0CG31 522 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 CES1P23141 567 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 MERTKQ12866 999 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 ZBTB17Q13105 803 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 ABRAXAS1Q6UWZ7 409 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 CATSPERGQ6ZRH7 1159 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 CYS1Q717R9 158 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 FAM35AQ86V20 835 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 TNIP3Q96KP6 325 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 WDCPQ9H6R7 721 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 BTRCQ9Y297 605 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 TBC1D30Q9Y2I9 924 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 TIMM13Q9Y5L4 95 aaPredicted RBP11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 LSM3P62310 102 aaKnown RBP11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 NSUN2Q08J23 767 aaKnown RBP eCLIP11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 APOFQ13790 326 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 FRG1Q14331 258 aaKnown RBP11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 RGS21Q2M5E4 152 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 AARS2Q5JTZ9 985 aaKnown RBP11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 TXNDC5Q8NBS9 432 aaKnown RBP11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 GABPB2Q8TAK5 448 aaPredicted RBP11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 GPR20Q99678 358 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 NAA50Q9GZZ1 169 aaKnown RBP11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 OLAHQ9NV23 265 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 FAIMQ9NVQ4 179 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 SMOXQ9NWM0 555 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 IGSF9Q9P2J2 1179 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 FBXO5Q9UKT4 447 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 FZD10Q9ULW2 581 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 CRYL1Q9Y2S2 319 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 NDUFAF1Q9Y375 327 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 TRAF6Q9Y4K3 522 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 TRIM17Q9Y577 477 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 PCDHGA7Q9Y5G6 932 aa11.68□□□□□ -0.54
PPFIA2-227ENST00000552948 FAM72CH0Y354 149 aa11.67□□□□□ -0.54
PPFIA2-227ENST00000552948 NFKBIAP25963 317 aa11.67□□□□□ -0.54
PPFIA2-227ENST00000552948 OAZ1P54368 228 aa11.67□□□□□ -0.54
PPFIA2-227ENST00000552948 PRKAA2P54646 552 aa11.67□□□□□ -0.54
PPFIA2-227ENST00000552948 SLC25A52Q3SY17 297 aa11.67□□□□□ -0.54
PPFIA2-227ENST00000552948 FBXO47Q5MNV8 452 aa11.67□□□□□ -0.54
PPFIA2-227ENST00000552948 FAM72AQ5TYM5 149 aa11.67□□□□□ -0.54
PPFIA2-227ENST00000552948 FAM72DQ6L9T8 149 aa11.67□□□□□ -0.54
PPFIA2-227ENST00000552948 STK32CQ86UX6 486 aa11.67□□□□□ -0.54
PPFIA2-227ENST00000552948 FAM72BQ86X60 149 aa11.67□□□□□ -0.54
PPFIA2-227ENST00000552948 ATPAF2Q8N5M1 289 aa11.67□□□□□ -0.54
PPFIA2-227ENST00000552948 OR52K2Q8NGK3 314 aa11.67□□□□□ -0.54
PPFIA2-227ENST00000552948 RDH11Q8TC12 318 aa11.67□□□□□ -0.54
PPFIA2-227ENST00000552948 WNT8BQ93098 351 aa11.67□□□□□ -0.54
PPFIA2-227ENST00000552948 MID1IP1Q9NPA3 183 aa11.67□□□□□ -0.54
PPFIA2-227ENST00000552948 SUN2Q9UH99 717 aa11.67□□□□□ -0.54
PPFIA2-227ENST00000552948 SNX5Q9Y5X3 404 aa11.67□□□□□ -0.54
PPFIA2-227ENST00000552948 COL16A1Q07092 1604 aaPredicted RBP11.67□□□□□ -0.54
PPFIA2-227ENST00000552948 A0A0J9YYE9 177 aa11.67□□□□□ -0.54
PPFIA2-227ENST00000552948 ZCWPW2A0A1B0GU75 182 aa11.67□□□□□ -0.54
PPFIA2-227ENST00000552948 BTBD19C9JJ37 291 aa11.67□□□□□ -0.54
PPFIA2-227ENST00000552948 ACOT8O14734 319 aa11.67□□□□□ -0.54
PPFIA2-227ENST00000552948 ATE1O95260 518 aa11.67□□□□□ -0.54
PPFIA2-227ENST00000552948 CCNA2P20248 432 aa11.67□□□□□ -0.54
PPFIA2-227ENST00000552948 CHRM3P20309 590 aa11.67□□□□□ -0.54
PPFIA2-227ENST00000552948 PCYT1AP49585 367 aa11.67□□□□□ -0.54
PPFIA2-227ENST00000552948 ZNF618Q5T7W0 954 aa11.67□□□□□ -0.54
PPFIA2-227ENST00000552948 NEPROQ6NW34 567 aa11.67□□□□□ -0.54
PPFIA2-227ENST00000552948 BBS5Q8N3I7 341 aa11.67□□□□□ -0.54
PPFIA2-227ENST00000552948 ULBP1Q9BZM6 244 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms