RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 NAF1Q96HR8 494 aaKnown RBP12.03□□□□□ -0.48
CKAP4-202ENST00000552828 VCPIP1Q96JH7 1222 aa12.03□□□□□ -0.48
CKAP4-202ENST00000552828 TBATAQ96M53 351 aa12.03□□□□□ -0.48
CKAP4-202ENST00000552828 CPNE5Q9HCH3 593 aa12.03□□□□□ -0.48
CKAP4-202ENST00000552828 SEPT11Q9NVA2 429 aaKnown RBP12.03□□□□□ -0.48
CKAP4-202ENST00000552828 FCF1Q9Y324 198 aaKnown RBP12.03□□□□□ -0.48
CKAP4-202ENST00000552828 LUC7L2Q9Y383 392 aaKnown RBP12.03□□□□□ -0.48
CKAP4-202ENST00000552828 PCDHGA8Q9Y5G5 932 aa12.03□□□□□ -0.48
CKAP4-202ENST00000552828 AREL1O15033 823 aa12.02□□□□□ -0.49
CKAP4-202ENST00000552828 GSRP00390 522 aa12.02□□□□□ -0.49
CKAP4-202ENST00000552828 JUNDP17535 347 aa12.02□□□□□ -0.49
CKAP4-202ENST00000552828 TNFAIP3P21580 790 aa12.02□□□□□ -0.49
CKAP4-202ENST00000552828 MLLT3P42568 568 aaPredicted RBP12.02□□□□□ -0.49
CKAP4-202ENST00000552828 ABL2P42684 1182 aa12.02□□□□□ -0.49
CKAP4-202ENST00000552828 NSFP46459 744 aaKnown RBP12.02□□□□□ -0.49
CKAP4-202ENST00000552828 DNA2P51530 1060 aa12.02□□□□□ -0.49
CKAP4-202ENST00000552828 GEMIN4P57678 1058 aaKnown RBP12.02□□□□□ -0.49
CKAP4-202ENST00000552828 YPEL5P62699 121 aa12.02□□□□□ -0.49
CKAP4-202ENST00000552828 ZBED6P86452 979 aa12.02□□□□□ -0.49
CKAP4-202ENST00000552828 VAC14Q08AM6 782 aa12.02□□□□□ -0.49
CKAP4-202ENST00000552828 ARHGAP40Q5TG30 622 aa12.02□□□□□ -0.49
CKAP4-202ENST00000552828 SPECC1LQ69YQ0 1117 aa12.02□□□□□ -0.49
CKAP4-202ENST00000552828 GUSBP11Q6P575 273 aa12.02□□□□□ -0.49
CKAP4-202ENST00000552828 SARM1Q6SZW1 724 aa12.02□□□□□ -0.49
CKAP4-202ENST00000552828 RBM44Q6ZP01 1051 aaKnown RBP12.02□□□□□ -0.49
CKAP4-202ENST00000552828 EFL1Q7Z2Z2 1120 aaKnown RBP12.02□□□□□ -0.49
CKAP4-202ENST00000552828 NLRP14Q86W24 1093 aa12.02□□□□□ -0.49
CKAP4-202ENST00000552828 FAM131BQ86XD5 332 aa12.02□□□□□ -0.49
CKAP4-202ENST00000552828 TTC9Q92623 222 aa12.02□□□□□ -0.49
CKAP4-202ENST00000552828 SYN2Q92777 582 aaPredicted RBP12.02□□□□□ -0.49
CKAP4-202ENST00000552828 ARHGEF2Q92974 986 aaKnown RBP12.02□□□□□ -0.49
CKAP4-202ENST00000552828 ARHGEF26Q96DR7 871 aa12.02□□□□□ -0.49
CKAP4-202ENST00000552828 ATXN7L3BQ96GX2 97 aa12.02□□□□□ -0.49
CKAP4-202ENST00000552828 CFAP57Q96MR6 1250 aa12.02□□□□□ -0.49
CKAP4-202ENST00000552828 PCDHB18PQ96TA0 734 aa12.02□□□□□ -0.49
CKAP4-202ENST00000552828 RBSNQ9H1K0 784 aa12.02□□□□□ -0.49
CKAP4-202ENST00000552828 ZDHHC6Q9H6R6 413 aa12.02□□□□□ -0.49
CKAP4-202ENST00000552828 SPASTQ9UBP0 616 aa12.02□□□□□ -0.49
CKAP4-202ENST00000552828 OR12D3Q9UGF7 316 aa12.02□□□□□ -0.49
CKAP4-202ENST00000552828 IPO11Q9UI26 975 aaKnown RBP12.02□□□□□ -0.49
CKAP4-202ENST00000552828 CAPN11Q9UMQ6 739 aa12.02□□□□□ -0.49
CKAP4-202ENST00000552828 SATB2Q9UPW6 733 aa12.02□□□□□ -0.49
CKAP4-202ENST00000552828 ENTPD2Q9Y5L3 495 aa12.02□□□□□ -0.49
CKAP4-202ENST00000552828 ACTL7AQ9Y615 435 aa12.02□□□□□ -0.49
CKAP4-202ENST00000552828 PIEZO2Q9H5I5 2752 aa12.02□□□□□ -0.49
CKAP4-202ENST00000552828 MAST4O15021 2626 aa12.02□□□□□ -0.49
CKAP4-202ENST00000552828 CPED1A4D0V7 1026 aa12.01□□□□□ -0.49
CKAP4-202ENST00000552828 CDRT15L2A8MXV6 281 aa12.01□□□□□ -0.49
CKAP4-202ENST00000552828 LMO7DNF2Z398 122 aa12.01□□□□□ -0.49
CKAP4-202ENST00000552828 TOR1BO14657 336 aa12.01□□□□□ -0.49
CKAP4-202ENST00000552828 KLK10O43240 276 aa12.01□□□□□ -0.49
CKAP4-202ENST00000552828 GCATO75600 419 aa12.01□□□□□ -0.49
CKAP4-202ENST00000552828 POP4O95707 220 aaKnown RBP12.01□□□□□ -0.49
CKAP4-202ENST00000552828 UNGP13051 313 aaPredicted RBP12.01□□□□□ -0.49
CKAP4-202ENST00000552828 RHOQP17081 205 aa12.01□□□□□ -0.49
CKAP4-202ENST00000552828 MMP8P22894 467 aa12.01□□□□□ -0.49
CKAP4-202ENST00000552828 RBMS1P29558 406 aaKnown RBP12.01□□□□□ -0.49
CKAP4-202ENST00000552828 ADRA1BP35368 520 aa12.01□□□□□ -0.49
CKAP4-202ENST00000552828 ACVRL1P37023 503 aa12.01□□□□□ -0.49
CKAP4-202ENST00000552828 PRKCIP41743 596 aa12.01□□□□□ -0.49
CKAP4-202ENST00000552828 MAPKAPK2P49137 400 aa12.01□□□□□ -0.49
CKAP4-202ENST00000552828 RPIAP49247 311 aa12.01□□□□□ -0.49
CKAP4-202ENST00000552828 KLHL30Q0D2K2 578 aa12.01□□□□□ -0.49
CKAP4-202ENST00000552828 TRIM14Q14142 442 aa12.01□□□□□ -0.49
CKAP4-202ENST00000552828 PTK2BQ14289 1009 aa12.01□□□□□ -0.49
CKAP4-202ENST00000552828 NR0B2Q15466 257 aa12.01□□□□□ -0.49
CKAP4-202ENST00000552828 CLEC16AQ2KHT3 1053 aa12.01□□□□□ -0.49
CKAP4-202ENST00000552828 DEFB133Q30KQ1 61 aa12.01□□□□□ -0.49
CKAP4-202ENST00000552828 MYLK3Q32MK0 819 aa12.01□□□□□ -0.49
CKAP4-202ENST00000552828 TAF1BQ53T94 588 aaPredicted RBP12.01□□□□□ -0.49
CKAP4-202ENST00000552828 C2CD6Q53TS8 623 aa12.01□□□□□ -0.49
CKAP4-202ENST00000552828 GAS2L3Q86XJ1 694 aa12.01□□□□□ -0.49
CKAP4-202ENST00000552828 VSTM4Q8IW00 320 aa12.01□□□□□ -0.49
CKAP4-202ENST00000552828 DRC7Q8IY82 874 aa12.01□□□□□ -0.49
CKAP4-202ENST00000552828 OR2AP1Q8NGE2 309 aa12.01□□□□□ -0.49
CKAP4-202ENST00000552828 SLC30A5Q8TAD4 765 aa12.01□□□□□ -0.49
CKAP4-202ENST00000552828 WDR48Q8TAF3 677 aa12.01□□□□□ -0.49
CKAP4-202ENST00000552828 LMX1AQ8TE12 382 aa12.01□□□□□ -0.49
CKAP4-202ENST00000552828 CCDC97Q96F63 343 aaPredicted RBP12.01□□□□□ -0.49
CKAP4-202ENST00000552828 IL12RB2Q99665 862 aa12.01□□□□□ -0.49
CKAP4-202ENST00000552828 OSBPL1AQ9BXW6 950 aa12.01□□□□□ -0.49
CKAP4-202ENST00000552828 TM6SF2Q9BZW4 377 aa12.01□□□□□ -0.49
CKAP4-202ENST00000552828 TRIM5Q9C035 493 aa12.01□□□□□ -0.49
CKAP4-202ENST00000552828 MAGEH1Q9H213 219 aa12.01□□□□□ -0.49
CKAP4-202ENST00000552828 HAUS4Q9H6D7 363 aa12.01□□□□□ -0.49
CKAP4-202ENST00000552828 NDFIP2Q9NV92 336 aa12.01□□□□□ -0.49
CKAP4-202ENST00000552828 TMEM248Q9NWD8 314 aa12.01□□□□□ -0.49
CKAP4-202ENST00000552828 GGT7Q9UJ14 662 aa12.01□□□□□ -0.49
CKAP4-202ENST00000552828 PNMA8BQ9ULN7 279 aaPredicted RBP12.01□□□□□ -0.49
CKAP4-202ENST00000552828 NEU3Q9UQ49 428 aa12.01□□□□□ -0.49
CKAP4-202ENST00000552828 BZW2Q9Y6E2 419 aaKnown RBP12.01□□□□□ -0.49
CKAP4-202ENST00000552828 TRPM6Q9BX84 2022 aa12□□□□□ -0.49
CKAP4-202ENST00000552828 FAM170AA1A519 330 aa12□□□□□ -0.49
CKAP4-202ENST00000552828 GOLGA8SH3BPF8 625 aa12□□□□□ -0.49
CKAP4-202ENST00000552828 J3QKU1 62 aa12□□□□□ -0.49
CKAP4-202ENST00000552828 K7ENP7 123 aa12□□□□□ -0.49
CKAP4-202ENST00000552828 NEMP1O14524 444 aa12□□□□□ -0.49
CKAP4-202ENST00000552828 GYPCP04921 128 aa12□□□□□ -0.49
CKAP4-202ENST00000552828 CALB1P05937 261 aa12□□□□□ -0.49
CKAP4-202ENST00000552828 TPM1P09493 284 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms