RNA–Protein interactions for RNA: ENST00000552341.5

PFDN5-216, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 1,980 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-216ENST00000552341 CCL26Q9Y258 94 aa10.96□□□□□ -0.66
PFDN5-216ENST00000552341 MTO1Q9Y2Z2 717 aaKnown RBP10.96□□□□□ -0.66
PFDN5-216ENST00000552341 ANKRD36A6QL64 1941 aa10.95□□□□□ -0.66
PFDN5-216ENST00000552341 ATG2AQ2TAZ0 1938 aa10.95□□□□□ -0.66
PFDN5-216ENST00000552341 HEATR9A2RTY3 570 aa10.95□□□□□ -0.66
PFDN5-216ENST00000552341 H0Y626 953 aa10.95□□□□□ -0.66
PFDN5-216ENST00000552341 LEFTY2O00292 366 aa10.95□□□□□ -0.66
PFDN5-216ENST00000552341 LDB2O43679 373 aa10.95□□□□□ -0.66
PFDN5-216ENST00000552341 CLASP2O75122 1294 aaKnown RBP10.95□□□□□ -0.66
PFDN5-216ENST00000552341 PAPSS2O95340 614 aaPredicted RBP10.95□□□□□ -0.66
PFDN5-216ENST00000552341 PRLP01236 227 aa10.95□□□□□ -0.66
PFDN5-216ENST00000552341 AHSGP02765 367 aa10.95□□□□□ -0.66
PFDN5-216ENST00000552341 PRKCGP05129 697 aa10.95□□□□□ -0.66
PFDN5-216ENST00000552341 RB1P06400 928 aa10.95□□□□□ -0.66
PFDN5-216ENST00000552341 SERPINF2P08697 491 aa10.95□□□□□ -0.66
PFDN5-216ENST00000552341 HLA-DPA1P20036 260 aa10.95□□□□□ -0.66
PFDN5-216ENST00000552341 HOXA9P31269 272 aa10.95□□□□□ -0.66
PFDN5-216ENST00000552341 ABCG1P45844 678 aa10.95□□□□□ -0.66
PFDN5-216ENST00000552341 SERPINB4P48594 390 aa10.95□□□□□ -0.66
PFDN5-216ENST00000552341 SLC5A9Q2M3M2 681 aa10.95□□□□□ -0.66
PFDN5-216ENST00000552341 PPM1JQ5JR12 505 aa10.95□□□□□ -0.66
PFDN5-216ENST00000552341 C9orf50Q5SZB4 431 aa10.95□□□□□ -0.66
PFDN5-216ENST00000552341 TSTD2Q5T7W7 516 aa10.95□□□□□ -0.66
PFDN5-216ENST00000552341 CACNA2D3Q8IZS8 1091 aa10.95□□□□□ -0.66
PFDN5-216ENST00000552341 TDRD5Q8NAT2 981 aaKnown RBP10.95□□□□□ -0.66
PFDN5-216ENST00000552341 VPS39Q96JC1 886 aa10.95□□□□□ -0.66
PFDN5-216ENST00000552341 EXOC2Q96KP1 924 aa10.95□□□□□ -0.66
PFDN5-216ENST00000552341 CINPQ9BW66 212 aaPredicted RBP10.95□□□□□ -0.66
PFDN5-216ENST00000552341 SMG9Q9H0W8 520 aaKnown RBP10.95□□□□□ -0.66
PFDN5-216ENST00000552341 TXNDC16Q9P2K2 825 aa10.95□□□□□ -0.66
PFDN5-216ENST00000552341 GGT7Q9UJ14 662 aa10.95□□□□□ -0.66
PFDN5-216ENST00000552341 LSM7Q9UK45 103 aaKnown RBP10.95□□□□□ -0.66
PFDN5-216ENST00000552341 EMCNQ9ULC0 261 aa10.95□□□□□ -0.66
PFDN5-216ENST00000552341 CLEC4EQ9ULY5 219 aa10.95□□□□□ -0.66
PFDN5-216ENST00000552341 ZNF510Q9Y2H8 683 aa10.95□□□□□ -0.66
PFDN5-216ENST00000552341 WDR91A4D1P6 747 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 INSIG1O15503 277 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 EDF1O60869 148 aaKnown RBP10.94□□□□□ -0.66
PFDN5-216ENST00000552341 FGF1P05230 155 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 PTPN2P17706 415 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 GMPRP36959 345 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 CSKP41240 450 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 PDE1BQ01064 536 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 ACVR1Q04771 509 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 INO80DQ53TQ3 878 aaPredicted RBP10.94□□□□□ -0.66
PFDN5-216ENST00000552341 MPP7Q5T2T1 576 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 FYB2Q5VWT5 728 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 LINGO4Q6UY18 593 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 FAM47EQ6ZV65 393 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 YTHDF3Q7Z739 585 aaKnown RBP10.94□□□□□ -0.66
PFDN5-216ENST00000552341 CMC1Q7Z7K0 106 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 ZC3HC1Q86WB0 502 aaKnown RBP10.94□□□□□ -0.66
PFDN5-216ENST00000552341 DENND6AQ8IWF6 608 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 CMTM8Q8IZV2 173 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 BBS5Q8N3I7 341 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 LRRC8CQ8TDW0 803 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 MICAL1Q8TDZ2 1067 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 BHMTQ93088 406 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 LMLNQ96KR4 655 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 GPR22Q99680 433 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 PITPNM3Q9BZ71 974 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 NSRP1Q9H0G5 558 aaKnown RBP10.94□□□□□ -0.66
PFDN5-216ENST00000552341 MTIF3Q9H2K0 278 aaKnown RBP10.94□□□□□ -0.66
PFDN5-216ENST00000552341 SNX15Q9NRS6 342 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 NSMCE4AQ9NXX6 385 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 VPS51Q9UID3 782 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 SH3BP1Q9Y3L3 701 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 TIMM44O43615 452 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 TMCC1O94876 653 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 FSBPO95073 299 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 MT-CO1P00395 513 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 CA3P07451 260 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 RHOP08100 348 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 TYK2P29597 1187 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 SCNN1BP51168 640 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 ARSDP51689 593 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 NSUN2Q08J23 767 aaKnown RBP eCLIP10.94□□□□□ -0.66
PFDN5-216ENST00000552341 CTBP1Q13363 440 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 SEPT6Q14141 434 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 GALNT3Q14435 633 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 ITIH4Q14624 930 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 TEAD2Q15562 447 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 SEPT7Q16181 437 aaKnown RBP10.94□□□□□ -0.66
PFDN5-216ENST00000552341 PRSS36Q5K4E3 855 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 GPR158Q5T848 1215 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 CES4AQ5XG92 561 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 MFSD6LQ8IWD5 586 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 APCDD1Q8J025 514 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 CCDC197Q8NCU1 140 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 C2CD4AQ8NCU7 369 aaPredicted RBP10.94□□□□□ -0.66
PFDN5-216ENST00000552341 ARMC2Q8NEN0 867 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 SH3RF2Q8TEC5 729 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 USP13Q92995 863 aaPredicted RBP10.94□□□□□ -0.66
PFDN5-216ENST00000552341 ATXN7L3BQ96GX2 97 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 GCNAQ96QF7 691 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 NUDCD1Q96RS6 583 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 RHOJQ9H4E5 214 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 MANSC1Q9H8J5 431 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 CAB39LQ9H9S4 337 aa10.94□□□□□ -0.66
PFDN5-216ENST00000552341 SIRPGQ9P1W8 387 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms