RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 PNLIPRP2P54317 469 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 MRPS5P82675 430 aaKnown RBP4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 PPARDQ03181 441 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 ERICH6BQ5W0A0 696 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 FBXO42Q6P3S6 717 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 PLBD1Q6P4A8 553 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 KCNV1Q6PIU1 500 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 DCLRE1AQ6PJP8 1040 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 CPLX2Q6PUV4 134 aaKnown RBP4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 TRIM72Q6ZMU5 477 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 RBM44Q6ZP01 1051 aaKnown RBP4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 RNF207Q6ZRF8 634 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 GSTA5Q7RTV2 222 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 GLRX5Q86SX6 157 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 WDR5BQ86VZ2 330 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 SNX32Q86XE0 403 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 CEP97Q8IW35 865 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 CADM3Q8N126 398 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 SLC44A3Q8N4M1 653 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 HJURPQ8NCD3 748 aaPredicted RBP4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 GOT1L1Q8NHS2 421 aaPredicted RBP4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 SH3RF3Q8TEJ3 882 aaPredicted RBP4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 KAT2AQ92830 837 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 ZKSCAN4Q969J2 545 aaPredicted RBP4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 VPS33AQ96AX1 596 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 TMCO6Q96DC7 493 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 ELMOD3Q96FG2 381 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 CCDC17Q96LX7 622 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 SYT17Q9BSW7 474 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 TM2D2Q9BX73 214 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 C1QTNF5Q9BXJ0 243 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 KRTAP3-1Q9BYR8 98 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 ST6GALNAC4Q9H4F1 302 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 KIF9Q9HAQ2 790 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 SEL1LQ9UBV2 794 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 ANAPC2Q9UJX6 822 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 ST3GAL5Q9UNP4 418 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 TNFSF13BQ9Y275 285 aa4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 EPN1Q9Y6I3 576 aaPredicted RBP4.22□□□□□ -1.73
LSM6P2-201ENST00000552208 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 hCG_1809904A0A1W2PP81 198 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 A0A1W2PPE2 198 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 A0A1W2PR64 198 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 CXorf65A6NEN9 183 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 HS6ST1O60243 411 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 MITFO75030 526 aaPredicted RBP4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 NDUFS3O75489 264 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 TPPPO94811 219 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 C22orf31O95567 290 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 ITGAXP20702 1163 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 THPOP40225 353 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 MSH2P43246 934 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 LMAN1P49257 510 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 CYP2J2P51589 502 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 STAT2P52630 851 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 MRPS35P82673 323 aaKnown RBP4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 BFSP1Q12934 665 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 FOXI1Q12951 378 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 GRAPQ13588 217 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 RUNX2Q13950 521 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 VEPH1Q14D04 833 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 PPP2R5BQ15173 497 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 ADIPOQQ15848 244 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 PFKFB3Q16875 520 aaPredicted RBP4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 COL28A1Q2UY09 1125 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 PCGF3Q3KNV8 242 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 CRY2Q49AN0 593 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 C9orf152Q5JTZ5 239 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 SPDYAQ5MJ70 313 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 LY6G5CQ5SRR4 150 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 KRT79Q5XKE5 535 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 Q6YL49 198 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 MFSD6Q6ZSS7 791 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 SLC29A4Q7RTT9 530 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 DNAJB7Q7Z6W7 309 aaPredicted RBP4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 OR8H3Q8N146 312 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 MINDY1Q8N5J2 469 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 FAM47BQ8NA70 645 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 ZNF398Q8TD17 642 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 ACTRT2Q8TDY3 377 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 ZNF653Q96CK0 615 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 DAZAP1Q96EP5 407 aaKnown RBP4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 PPP1R13BQ96KQ4 1090 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 JAKMIP1Q96N16 626 aaKnown RBP4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 PLEKHG4BQ96PX9 1271 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 FCRL5Q96RD9 977 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 NCAPGQ9BPX3 1015 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 IFT27Q9BW83 186 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 TKTL2Q9H0I9 626 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 HIPK3Q9H422 1215 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 OPA3Q9H6K4 179 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 ZNF304Q9HCX3 659 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 RANGRFQ9HD47 186 aaPredicted RBP4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 SLC2A4RGQ9NR83 387 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 SELENONQ9NZV5 590 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 SH3BP4Q9P0V3 963 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 CPSF2Q9P2I0 782 aaKnown RBP4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 CTNNAL1Q9UBT7 734 aa4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 LSM4Q9Y4Z0 139 aaKnown RBP4.21□□□□□ -1.74
LSM6P2-201ENST00000552208 COL4A3Q01955 1670 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms