RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 ECHDC3Q96DC8 303 aa16.54■□□□□ 0.24
GCN1-209ENST00000551920 NUDCD1Q96RS6 583 aa16.54■□□□□ 0.24
GCN1-209ENST00000551920 TUBGCP5Q96RT8 1024 aa16.54■□□□□ 0.24
GCN1-209ENST00000551920 FSCN3Q9NQT6 498 aa16.54■□□□□ 0.24
GCN1-209ENST00000551920 RXFP3Q9NSD7 469 aa16.54■□□□□ 0.24
GCN1-209ENST00000551920 DKK3Q9UBP4 350 aa16.54■□□□□ 0.24
GCN1-209ENST00000551920 EIF2B4Q9UI10 523 aaKnown RBP16.54■□□□□ 0.24
GCN1-209ENST00000551920 EFR3BQ9Y2G0 817 aa16.54■□□□□ 0.24
GCN1-209ENST00000551920 FADS3Q9Y5Q0 445 aa16.54■□□□□ 0.24
GCN1-209ENST00000551920 SHROOM3Q8TF72 1996 aa16.53■□□□□ 0.24
GCN1-209ENST00000551920 TCRBV7S2A1N4TA0A589 114 aa16.53■□□□□ 0.24
GCN1-209ENST00000551920 APOC4-APOC2K7ER74 178 aa16.53■□□□□ 0.24
GCN1-209ENST00000551920 PPP1R12AO14974 1030 aaPredicted RBP16.53■□□□□ 0.24
GCN1-209ENST00000551920 AREL1O15033 823 aa16.53■□□□□ 0.24
GCN1-209ENST00000551920 LRP3O75074 770 aa16.53■□□□□ 0.24
GCN1-209ENST00000551920 JCHAINP01591 159 aa16.53■□□□□ 0.24
GCN1-209ENST00000551920 APOC2P02655 101 aa16.53■□□□□ 0.24
GCN1-209ENST00000551920 TIMP2P16035 220 aa16.53■□□□□ 0.24
GCN1-209ENST00000551920 ITIH2P19823 946 aa16.53■□□□□ 0.24
GCN1-209ENST00000551920 CCR5P51681 352 aa16.53■□□□□ 0.24
GCN1-209ENST00000551920 DSC2Q02487 901 aa16.53■□□□□ 0.24
GCN1-209ENST00000551920 RAD51Q06609 339 aa16.53■□□□□ 0.24
GCN1-209ENST00000551920 AP1B1Q10567 949 aa16.53■□□□□ 0.24
GCN1-209ENST00000551920 TRAF2Q12933 501 aa16.53■□□□□ 0.24
GCN1-209ENST00000551920 NOMO1Q15155 1222 aa16.53■□□□□ 0.24
GCN1-209ENST00000551920 CSRP2Q16527 193 aa16.53■□□□□ 0.24
GCN1-209ENST00000551920 WDR45BQ5MNZ6 344 aa16.53■□□□□ 0.24
GCN1-209ENST00000551920 SEL1L3Q68CR1 1132 aa16.53■□□□□ 0.24
GCN1-209ENST00000551920 TRIM69Q86WT6 500 aa16.53■□□□□ 0.24
GCN1-209ENST00000551920 RGL4Q8IZJ4 473 aa16.53■□□□□ 0.24
GCN1-209ENST00000551920 ZCCHC9Q8N567 271 aaKnown RBP16.53■□□□□ 0.24
GCN1-209ENST00000551920 NSMCE1Q8WV22 266 aa16.53■□□□□ 0.24
GCN1-209ENST00000551920 P3H4Q92791 437 aa16.53■□□□□ 0.24
GCN1-209ENST00000551920 QKIQ96PU8 341 aaKnown RBP eCLIP16.53■□□□□ 0.24
GCN1-209ENST00000551920 IL12RB2Q99665 862 aa16.53■□□□□ 0.24
GCN1-209ENST00000551920 FAM118BQ9BPY3 351 aa16.53■□□□□ 0.24
GCN1-209ENST00000551920 KDM4CQ9H3R0 1056 aa16.53■□□□□ 0.24
GCN1-209ENST00000551920 SUV39H2Q9H5I1 410 aa16.53■□□□□ 0.24
GCN1-209ENST00000551920 ATP13A3Q9H7F0 1226 aa16.53■□□□□ 0.24
GCN1-209ENST00000551920 PREBQ9HCU5 417 aa16.53■□□□□ 0.24
GCN1-209ENST00000551920 RBM22Q9NW64 420 aaKnown RBP eCLIP16.53■□□□□ 0.24
GCN1-209ENST00000551920 PYCARDQ9ULZ3 195 aa16.53■□□□□ 0.24
GCN1-209ENST00000551920 ZFR2Q9UPR6 939 aaKnown RBP16.53■□□□□ 0.24
GCN1-209ENST00000551920 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.53■□□□□ 0.24
GCN1-209ENST00000551920 CEP192Q8TEP8 1941 aa16.53■□□□□ 0.24
GCN1-209ENST00000551920 TBC1D3DA0A087WVF3 549 aa16.52■□□□□ 0.24
GCN1-209ENST00000551920 TBC1D3IA0A087WXS9 549 aa16.52■□□□□ 0.24
GCN1-209ENST00000551920 TBC1D3EA0A087X179 549 aa16.52■□□□□ 0.24
GCN1-209ENST00000551920 TBC1D3KA0A087X1G2 549 aa16.52■□□□□ 0.24
GCN1-209ENST00000551920 TBC1D3FA6NER0 549 aaPredicted RBP16.52■□□□□ 0.24
GCN1-209ENST00000551920 USP27XA6NNY8 438 aa16.52■□□□□ 0.24
GCN1-209ENST00000551920 TBC1D3LB9A6J9 549 aa16.52■□□□□ 0.24
GCN1-209ENST00000551920 AP1G1O43747 822 aa16.52■□□□□ 0.24
GCN1-209ENST00000551920 PRKCGP05129 697 aa16.52■□□□□ 0.24
GCN1-209ENST00000551920 TBC1D3HP0C7X1 549 aa16.52■□□□□ 0.24
GCN1-209ENST00000551920 ZNF806P0C7X5 589 aa16.52■□□□□ 0.24
GCN1-209ENST00000551920 SERPINA4P29622 427 aa16.52■□□□□ 0.24
GCN1-209ENST00000551920 MAT2AP31153 395 aaKnown RBP16.52■□□□□ 0.24
GCN1-209ENST00000551920 HOXD12P35452 270 aa16.52■□□□□ 0.24
GCN1-209ENST00000551920 MAPK8P45983 427 aa16.52■□□□□ 0.24
GCN1-209ENST00000551920 NIPAL4Q0D2K0 466 aa16.52■□□□□ 0.24
GCN1-209ENST00000551920 KLF1Q13351 362 aaPredicted RBP16.52■□□□□ 0.24
GCN1-209ENST00000551920 GRM3Q14832 879 aa16.52■□□□□ 0.24
GCN1-209ENST00000551920 ZNF284Q2VY69 593 aa16.52■□□□□ 0.24
GCN1-209ENST00000551920 TMEM259Q4ZIN3 620 aa16.52■□□□□ 0.24
GCN1-209ENST00000551920 SYCP2LQ5T4T6 812 aa16.52■□□□□ 0.24
GCN1-209ENST00000551920 TBC1D3GQ6DHY5 549 aa16.52■□□□□ 0.24
GCN1-209ENST00000551920 TBC1D3CQ6IPX1 549 aa16.52■□□□□ 0.24
GCN1-209ENST00000551920 FBXL19Q6PCT2 694 aa16.52■□□□□ 0.24
GCN1-209ENST00000551920 LAYNQ6UX15 382 aa16.52■□□□□ 0.24
GCN1-209ENST00000551920 PRR23CQ6ZRP0 262 aa16.52■□□□□ 0.24
GCN1-209ENST00000551920 ZC3H18Q86VM9 953 aaKnown RBP16.52■□□□□ 0.24
GCN1-209ENST00000551920 KIAA2013Q8IYS2 634 aa16.52■□□□□ 0.24
GCN1-209ENST00000551920 TBC1D3Q8IZP1 549 aaPredicted RBP16.52■□□□□ 0.24
GCN1-209ENST00000551920 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.52■□□□□ 0.24
GCN1-209ENST00000551920 ARRDC2Q8TBH0 407 aa16.52■□□□□ 0.24
GCN1-209ENST00000551920 ACTL9Q8TC94 416 aa16.52■□□□□ 0.24
GCN1-209ENST00000551920 ZNF641Q96N77 438 aaPredicted RBP16.52■□□□□ 0.24
GCN1-209ENST00000551920 ALS2CR12Q96Q35 445 aa16.52■□□□□ 0.24
GCN1-209ENST00000551920 SEMA3CQ99985 751 aa16.52■□□□□ 0.24
GCN1-209ENST00000551920 POLR1EQ9GZS1 481 aaKnown RBP16.52■□□□□ 0.24
GCN1-209ENST00000551920 MIR1-1HGQ9H1L0 117 aa16.52■□□□□ 0.24
GCN1-209ENST00000551920 C10orf88Q9H8K7 445 aa16.52■□□□□ 0.24
GCN1-209ENST00000551920 SCUBE2Q9NQ36 999 aa16.52■□□□□ 0.24
GCN1-209ENST00000551920 VPS45Q9NRW7 570 aa16.52■□□□□ 0.24
GCN1-209ENST00000551920 SEPT10Q9P0V9 454 aa16.52■□□□□ 0.24
GCN1-209ENST00000551920 ATP8A1Q9Y2Q0 1164 aa16.52■□□□□ 0.24
GCN1-209ENST00000551920 TTLL3Q9Y4R7 772 aa16.52■□□□□ 0.24
GCN1-209ENST00000551920 PCDHGC4Q9Y5F7 938 aa16.52■□□□□ 0.24
GCN1-209ENST00000551920 A0A1W2PPC4 97 aa16.51■□□□□ 0.23
GCN1-209ENST00000551920 A0A1W2PQU0 124 aa16.51■□□□□ 0.23
GCN1-209ENST00000551920 LNP1A1A4G5 178 aa16.51■□□□□ 0.23
GCN1-209ENST00000551920 UPK3BL1B0FP48 263 aa16.51■□□□□ 0.23
GCN1-209ENST00000551920 UPK3BL2E5RIL1 263 aa16.51■□□□□ 0.23
GCN1-209ENST00000551920 WNT9AO14904 365 aa16.51■□□□□ 0.23
GCN1-209ENST00000551920 HTRA2O43464 458 aaPredicted RBP16.51■□□□□ 0.23
GCN1-209ENST00000551920 RNGTTO60942 597 aaKnown RBP16.51■□□□□ 0.23
GCN1-209ENST00000551920 MMP2P08253 660 aa16.51■□□□□ 0.23
GCN1-209ENST00000551920 PRLRP16471 622 aa16.51■□□□□ 0.23
GCN1-209ENST00000551920 CD27P26842 260 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms