RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 CCNB1P14635 433 aa13.89□□□□□ -0.19
TROAP-213ENST00000550709 TIMP2P16035 220 aa13.89□□□□□ -0.19
TROAP-213ENST00000550709 PRLRP16471 622 aa13.89□□□□□ -0.19
TROAP-213ENST00000550709 ITIH2P19823 946 aa13.89□□□□□ -0.19
TROAP-213ENST00000550709 CD27P26842 260 aa13.89□□□□□ -0.19
TROAP-213ENST00000550709 HOXD12P35452 270 aa13.89□□□□□ -0.19
TROAP-213ENST00000550709 ABL2P42684 1182 aa13.89□□□□□ -0.19
TROAP-213ENST00000550709 CSNK1DP48730 415 aa13.89□□□□□ -0.19
TROAP-213ENST00000550709 CSNK1EP49674 416 aaKnown RBP13.89□□□□□ -0.19
TROAP-213ENST00000550709 CCR5P51681 352 aa13.89□□□□□ -0.19
TROAP-213ENST00000550709 AP1S1P61966 158 aa13.89□□□□□ -0.19
TROAP-213ENST00000550709 BCL2L1Q07817 233 aa13.89□□□□□ -0.19
TROAP-213ENST00000550709 NSUN2Q08J23 767 aaKnown RBP eCLIP13.89□□□□□ -0.19
TROAP-213ENST00000550709 ZNF211Q13398 564 aaPredicted RBP13.89□□□□□ -0.19
TROAP-213ENST00000550709 HNRNPDQ14103 355 aaKnown RBP13.89□□□□□ -0.19
TROAP-213ENST00000550709 SEL1L3Q68CR1 1132 aa13.89□□□□□ -0.19
TROAP-213ENST00000550709 LAYNQ6UX15 382 aa13.89□□□□□ -0.19
TROAP-213ENST00000550709 UBL4BQ8N7F7 174 aa13.89□□□□□ -0.19
TROAP-213ENST00000550709 CEP76Q8TAP6 659 aa13.89□□□□□ -0.19
TROAP-213ENST00000550709 MAML1Q92585 1016 aa13.89□□□□□ -0.19
TROAP-213ENST00000550709 HDAC11Q96DB2 347 aa13.89□□□□□ -0.19
TROAP-213ENST00000550709 NSMCE3Q96MG7 304 aa13.89□□□□□ -0.19
TROAP-213ENST00000550709 TUBGCP5Q96RT8 1024 aa13.89□□□□□ -0.19
TROAP-213ENST00000550709 MGME1Q9BQP7 344 aa13.89□□□□□ -0.19
TROAP-213ENST00000550709 NUSAP1Q9BXS6 441 aaKnown RBP13.89□□□□□ -0.19
TROAP-213ENST00000550709 CEP41Q9BYV8 373 aa13.89□□□□□ -0.19
TROAP-213ENST00000550709 KDM4CQ9H3R0 1056 aa13.89□□□□□ -0.19
TROAP-213ENST00000550709 EBF2Q9HAK2 575 aa13.89□□□□□ -0.19
TROAP-213ENST00000550709 PREBQ9HCU5 417 aa13.89□□□□□ -0.19
TROAP-213ENST00000550709 SUSD2Q9UGT4 822 aa13.89□□□□□ -0.19
TROAP-213ENST00000550709 GGT7Q9UJ14 662 aa13.89□□□□□ -0.19
TROAP-213ENST00000550709 SLC6A14Q9UN76 642 aa13.89□□□□□ -0.19
TROAP-213ENST00000550709 PCDHGC4Q9Y5F7 938 aa13.89□□□□□ -0.19
TROAP-213ENST00000550709 FADS3Q9Y5Q0 445 aa13.89□□□□□ -0.19
TROAP-213ENST00000550709 EML5Q05BV3 1969 aa13.89□□□□□ -0.19
TROAP-213ENST00000550709 CFAP54Q96N23 3096 aa13.89□□□□□ -0.19
TROAP-213ENST00000550709 NUP205Q92621 2012 aa13.88□□□□□ -0.19
TROAP-213ENST00000550709 A0A1B0GTW7 788 aa13.88□□□□□ -0.19
TROAP-213ENST00000550709 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.88□□□□□ -0.19
TROAP-213ENST00000550709 A0A1W2PPC4 97 aa13.88□□□□□ -0.19
TROAP-213ENST00000550709 PPP1R12AO14974 1030 aaPredicted RBP13.88□□□□□ -0.19
TROAP-213ENST00000550709 SLC31A1O15431 190 aa13.88□□□□□ -0.19
TROAP-213ENST00000550709 PRKCGP05129 697 aa13.88□□□□□ -0.19
TROAP-213ENST00000550709 SERPINA4P29622 427 aa13.88□□□□□ -0.19
TROAP-213ENST00000550709 HSPA9P38646 679 aaKnown RBP13.88□□□□□ -0.19
TROAP-213ENST00000550709 CETN2P41208 172 aa13.88□□□□□ -0.19
TROAP-213ENST00000550709 MAPK8P45983 427 aa13.88□□□□□ -0.19
TROAP-213ENST00000550709 NR2C2P49116 596 aa13.88□□□□□ -0.19
TROAP-213ENST00000550709 COPS2P61201 443 aa13.88□□□□□ -0.19
TROAP-213ENST00000550709 SEMG2Q02383 582 aa13.88□□□□□ -0.19
TROAP-213ENST00000550709 PPIDQ08752 370 aaKnown RBP13.88□□□□□ -0.19
TROAP-213ENST00000550709 GRM3Q14832 879 aa13.88□□□□□ -0.19
TROAP-213ENST00000550709 PPP2R5EQ16537 467 aa13.88□□□□□ -0.19
TROAP-213ENST00000550709 PEAR1Q5VY43 1037 aaPredicted RBP13.88□□□□□ -0.19
TROAP-213ENST00000550709 RABEPKQ7Z6M1 372 aa13.88□□□□□ -0.19
TROAP-213ENST00000550709 PRPF39Q86UA1 669 aaKnown RBP13.88□□□□□ -0.19
TROAP-213ENST00000550709 ZC3H18Q86VM9 953 aaKnown RBP13.88□□□□□ -0.19
TROAP-213ENST00000550709 HORMAD1Q86X24 394 aa13.88□□□□□ -0.19
TROAP-213ENST00000550709 ZSWIM9Q86XI8 627 aa13.88□□□□□ -0.19
TROAP-213ENST00000550709 TEX26Q8N6G2 289 aa13.88□□□□□ -0.19
TROAP-213ENST00000550709 PDCD6IPQ8WUM4 868 aaKnown RBP13.88□□□□□ -0.19
TROAP-213ENST00000550709 P3H4Q92791 437 aa13.88□□□□□ -0.19
TROAP-213ENST00000550709 FEM1CQ96JP0 617 aa13.88□□□□□ -0.19
TROAP-213ENST00000550709 SERAC1Q96JX3 654 aa13.88□□□□□ -0.19
TROAP-213ENST00000550709 ZNF641Q96N77 438 aaPredicted RBP13.88□□□□□ -0.19
TROAP-213ENST00000550709 SLC6A18Q96N87 628 aa13.88□□□□□ -0.19
TROAP-213ENST00000550709 OLFM3Q96PB7 478 aa13.88□□□□□ -0.19
TROAP-213ENST00000550709 NUDCD1Q96RS6 583 aa13.88□□□□□ -0.19
TROAP-213ENST00000550709 MYOCQ99972 504 aa13.88□□□□□ -0.19
TROAP-213ENST00000550709 SEMA3CQ99985 751 aa13.88□□□□□ -0.19
TROAP-213ENST00000550709 ORAI3Q9BRQ5 295 aa13.88□□□□□ -0.19
TROAP-213ENST00000550709 HERPUD2Q9BSE4 406 aa13.88□□□□□ -0.19
TROAP-213ENST00000550709 GTPBP2Q9BX10 602 aaKnown RBP13.88□□□□□ -0.19
TROAP-213ENST00000550709 OSBPL8Q9BZF1 889 aa13.88□□□□□ -0.19
TROAP-213ENST00000550709 KCNF1Q9H3M0 494 aa13.88□□□□□ -0.19
TROAP-213ENST00000550709 TM9SF3Q9HD45 589 aa13.88□□□□□ -0.19
TROAP-213ENST00000550709 AASDHPPTQ9NRN7 309 aa13.88□□□□□ -0.19
TROAP-213ENST00000550709 DKK3Q9UBP4 350 aa13.88□□□□□ -0.19
TROAP-213ENST00000550709 A0A1B0GVT2 93 aa13.87□□□□□ -0.19
TROAP-213ENST00000550709 LNP1A1A4G5 178 aa13.87□□□□□ -0.19
TROAP-213ENST00000550709 IGLON5A6NGN9 336 aa13.87□□□□□ -0.19
TROAP-213ENST00000550709 MIF4GDA9UHW6 222 aaKnown RBP13.87□□□□□ -0.19
TROAP-213ENST00000550709 WNT9AO14904 365 aa13.87□□□□□ -0.19
TROAP-213ENST00000550709 DDX3YO15523 660 aaKnown RBP13.87□□□□□ -0.19
TROAP-213ENST00000550709 LATO43561 262 aa13.87□□□□□ -0.19
TROAP-213ENST00000550709 HLA-DQB2P05538 268 aa13.87□□□□□ -0.19
TROAP-213ENST00000550709 SERPINF2P08697 491 aa13.87□□□□□ -0.19
TROAP-213ENST00000550709 CR2P20023 1033 aa13.87□□□□□ -0.19
TROAP-213ENST00000550709 TGM2P21980 687 aa13.87□□□□□ -0.19
TROAP-213ENST00000550709 DSC2Q02487 901 aa13.87□□□□□ -0.19
TROAP-213ENST00000550709 LMNB2Q03252 620 aa13.87□□□□□ -0.19
TROAP-213ENST00000550709 ZBTB17Q13105 803 aa13.87□□□□□ -0.19
TROAP-213ENST00000550709 ZNF284Q2VY69 593 aa13.87□□□□□ -0.19
TROAP-213ENST00000550709 SLC23A3Q6PIS1 610 aa13.87□□□□□ -0.19
TROAP-213ENST00000550709 BBS12Q6ZW61 710 aa13.87□□□□□ -0.19
TROAP-213ENST00000550709 BZW1Q7L1Q6 419 aaKnown RBP13.87□□□□□ -0.19
TROAP-213ENST00000550709 ADAT2Q7Z6V5 191 aaKnown RBP13.87□□□□□ -0.19
TROAP-213ENST00000550709 TRIM69Q86WT6 500 aa13.87□□□□□ -0.19
TROAP-213ENST00000550709 OR2I1PQ8NGU4 316 aa13.87□□□□□ -0.19
TROAP-213ENST00000550709 C1orf216Q8TAB5 229 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms