RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 GPR1P46091 355 aa12.6□□□□□ -0.39
RAB3IP-212ENST00000550536 MAPKAPK3Q16644 382 aa12.6□□□□□ -0.39
RAB3IP-212ENST00000550536 XKR6Q5GH73 641 aa12.6□□□□□ -0.39
RAB3IP-212ENST00000550536 CLVS1Q8IUQ0 354 aaPredicted RBP12.6□□□□□ -0.39
RAB3IP-212ENST00000550536 RNF148Q8N7C7 305 aa12.6□□□□□ -0.39
RAB3IP-212ENST00000550536 ZNF670Q9BS34 389 aa12.6□□□□□ -0.39
RAB3IP-212ENST00000550536 EHD3Q9NZN3 535 aa12.6□□□□□ -0.39
RAB3IP-212ENST00000550536 ZNF510Q9Y2H8 683 aa12.6□□□□□ -0.39
RAB3IP-212ENST00000550536 C1QTNF3-AMACRE9PGA6 284 aa12.6□□□□□ -0.39
RAB3IP-212ENST00000550536 F8VP50 259 aa12.6□□□□□ -0.39
RAB3IP-212ENST00000550536 AMD1P17707 334 aa12.6□□□□□ -0.39
RAB3IP-212ENST00000550536 CES1P23141 567 aa12.6□□□□□ -0.39
RAB3IP-212ENST00000550536 PAX3P23760 479 aa12.6□□□□□ -0.39
RAB3IP-212ENST00000550536 IDH2P48735 452 aaKnown RBP12.6□□□□□ -0.39
RAB3IP-212ENST00000550536 MAGEE2Q8TD90 523 aaPredicted RBP12.6□□□□□ -0.39
RAB3IP-212ENST00000550536 TNK2Q07912 1038 aa12.6□□□□□ -0.39
RAB3IP-212ENST00000550536 DGCR6Q14129 220 aa12.6□□□□□ -0.39
RAB3IP-212ENST00000550536 STK32AQ8WU08 396 aa12.6□□□□□ -0.39
RAB3IP-212ENST00000550536 BTBD9Q96Q07 612 aa12.6□□□□□ -0.39
RAB3IP-212ENST00000550536 TSPAN18Q96SJ8 248 aa12.6□□□□□ -0.39
RAB3IP-212ENST00000550536 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.6□□□□□ -0.39
RAB3IP-212ENST00000550536 GPSM3Q9Y4H4 160 aa12.6□□□□□ -0.39
RAB3IP-212ENST00000550536 ZNF780BQ9Y6R6 833 aa12.6□□□□□ -0.39
RAB3IP-212ENST00000550536 CHKAP35790 457 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 TSHZ1Q6ZSZ6 1077 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 USP50Q70EL3 339 aaPredicted RBP12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 ADAMTSL2Q86TH1 951 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 ZFP14Q9HCL3 533 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 NCANO14594 1321 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 H3BQF6 201 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 TBL1XO60907 577 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 CBX6O95503 412 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 CRADDP78560 199 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 ABRAXAS1Q6UWZ7 409 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 CREG2Q8IUH2 290 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 EIF1ADQ8N9N8 165 aaKnown RBP12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 HJURPQ8NCD3 748 aaPredicted RBP12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 ZBTB45Q96K62 511 aaPredicted RBP12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 ZNF607Q96SK3 696 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 P2RX7Q99572 595 aaKnown RBP12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 IKZF3Q9UKT9 509 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 ULK1O75385 1050 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 ADH1CP00326 375 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 PTGES3Q15185 160 aaKnown RBP12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 TXNDC11Q6PKC3 985 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 SLC35C1Q96A29 364 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 PPP3R2Q96LZ3 170 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 DDX3XO00571 662 aaKnown RBP eCLIP12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 TPP2P29144 1249 aaPredicted RBP12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 PKNOX1P55347 436 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 POM121L1PQ3SYA9 428 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 DEPDC4Q8N2C3 294 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 ACMSDQ8TDX5 336 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 PGM2Q96G03 612 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 PAIP1Q9H074 479 aaKnown RBP12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 EXO5Q9H790 373 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 MTF2Q9Y483 593 aaPredicted RBP12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 SLIT3O75094 1523 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 NFKB1P19838 968 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 PSMD4P55036 377 aaKnown RBP12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 CXCL9Q07325 125 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 C15orf59Q2T9L4 293 aaPredicted RBP12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 BTN2A1Q7KYR7 527 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 RIOX2Q8IUF8 465 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 ARMC8Q8IUR7 673 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 RGL4Q8IZJ4 473 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 C15orf41Q9Y2V0 281 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 OR10H1Q9Y4A9 318 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 OPLAHO14841 1288 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 IL1BP01584 269 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 RALGDSQ12967 914 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 VGLL4Q14135 290 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 GPRIN3Q6ZVF9 776 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 FAM71AQ8IYT1 594 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 RP9Q8TA86 221 aaKnown RBP12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 RDH11Q8TC12 318 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 CXorf40BQ96DE9 158 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 SCN11AQ9UI33 1791 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 MOXD2PA6NHM9 499 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 AVILO75366 819 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 OTCP00480 354 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 KLHL23Q8NBE8 558 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 MYLPFQ96A32 169 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 PTCD3Q96EY7 689 aaKnown RBP12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 GRIP2Q9C0E4 1043 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 BRD9Q9H8M2 597 aa12.59□□□□□ -0.39
RAB3IP-212ENST00000550536 BCL9O00512 1426 aa12.58□□□□□ -0.39
RAB3IP-212ENST00000550536 AP3D1O14617 1153 aa12.58□□□□□ -0.39
RAB3IP-212ENST00000550536 RHAGQ02094 409 aa12.58□□□□□ -0.39
RAB3IP-212ENST00000550536 OFCC1Q8IZS5 231 aa12.58□□□□□ -0.39
RAB3IP-212ENST00000550536 REXO5Q96IC2 774 aaKnown RBP12.58□□□□□ -0.39
RAB3IP-212ENST00000550536 CORO1BQ9BR76 489 aa12.58□□□□□ -0.39
RAB3IP-212ENST00000550536 RHBGQ9H310 441 aa12.58□□□□□ -0.39
RAB3IP-212ENST00000550536 LEF1Q9UJU2 399 aaPredicted RBP12.58□□□□□ -0.39
RAB3IP-212ENST00000550536 ERGIC3Q9Y282 383 aa12.58□□□□□ -0.39
RAB3IP-212ENST00000550536 SH3GLB1Q9Y371 365 aa12.58□□□□□ -0.39
RAB3IP-212ENST00000550536 SLC6A2P23975 617 aa12.58□□□□□ -0.4
RAB3IP-212ENST00000550536 CHN2P52757 468 aa12.58□□□□□ -0.4
RAB3IP-212ENST00000550536 BROXQ5VW32 411 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms