RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 DAAM1Q9Y4D1 1078 aa21.98■■□□□ 1.11
SMARCC2-210ENST00000550519 BUB1O43683 1085 aa21.97■■□□□ 1.11
SMARCC2-210ENST00000550519 MMP20O60882 483 aa21.97■■□□□ 1.11
SMARCC2-210ENST00000550519 TM7SF2O76062 418 aa21.97■■□□□ 1.11
SMARCC2-210ENST00000550519 THOP1P52888 689 aa21.97■■□□□ 1.11
SMARCC2-210ENST00000550519 UCNP55089 124 aa21.97■■□□□ 1.11
SMARCC2-210ENST00000550519 RAD51Q06609 339 aa21.97■■□□□ 1.11
SMARCC2-210ENST00000550519 NR0B2Q15466 257 aa21.97■■□□□ 1.11
SMARCC2-210ENST00000550519 INO80DQ53TQ3 878 aaPredicted RBP21.97■■□□□ 1.11
SMARCC2-210ENST00000550519 PRRT3Q5FWE3 981 aa21.97■■□□□ 1.11
SMARCC2-210ENST00000550519 LRRC73Q5JTD7 316 aa21.97■■□□□ 1.11
SMARCC2-210ENST00000550519 CDKAL1Q5VV42 579 aa21.97■■□□□ 1.11
SMARCC2-210ENST00000550519 WDR59Q6PJI9 974 aa21.97■■□□□ 1.11
SMARCC2-210ENST00000550519 VPS36Q86VN1 386 aa21.97■■□□□ 1.11
SMARCC2-210ENST00000550519 PHACTR4Q8IZ21 702 aa21.97■■□□□ 1.11
SMARCC2-210ENST00000550519 RTL3Q8N8U3 475 aaKnown RBP21.97■■□□□ 1.11
SMARCC2-210ENST00000550519 NLRC4Q9NPP4 1024 aa21.97■■□□□ 1.11
SMARCC2-210ENST00000550519 MBNL1Q9NR56 388 aaKnown RBP21.97■■□□□ 1.11
SMARCC2-210ENST00000550519 THSD1Q9NS62 852 aa21.97■■□□□ 1.11
SMARCC2-210ENST00000550519 ADAM22Q9P0K1 906 aa21.97■■□□□ 1.11
SMARCC2-210ENST00000550519 DKK3Q9UBP4 350 aa21.97■■□□□ 1.11
SMARCC2-210ENST00000550519 ENTPD2Q9Y5L3 495 aa21.97■■□□□ 1.11
SMARCC2-210ENST00000550519 LMO7DNF2Z398 122 aa21.96■■□□□ 1.11
SMARCC2-210ENST00000550519 TOR1BO14657 336 aa21.96■■□□□ 1.11
SMARCC2-210ENST00000550519 TIMP2P16035 220 aa21.96■■□□□ 1.11
SMARCC2-210ENST00000550519 ITIH2P19823 946 aa21.96■■□□□ 1.11
SMARCC2-210ENST00000550519 GPD1P21695 349 aa21.96■■□□□ 1.11
SMARCC2-210ENST00000550519 NSFP46459 744 aaKnown RBP21.96■■□□□ 1.11
SMARCC2-210ENST00000550519 ADKP55263 362 aaKnown RBP21.96■■□□□ 1.11
SMARCC2-210ENST00000550519 C1orf61Q13536 156 aa21.96■■□□□ 1.11
SMARCC2-210ENST00000550519 KRT31Q15323 416 aa21.96■■□□□ 1.11
SMARCC2-210ENST00000550519 PERM1Q5SV97 790 aa21.96■■□□□ 1.11
SMARCC2-210ENST00000550519 BROXQ5VW32 411 aa21.96■■□□□ 1.11
SMARCC2-210ENST00000550519 SLFN11Q7Z7L1 901 aa21.96■■□□□ 1.11
SMARCC2-210ENST00000550519 PHF13Q86YI8 300 aaPredicted RBP21.96■■□□□ 1.11
SMARCC2-210ENST00000550519 SLC35F3Q8IY50 421 aa21.96■■□□□ 1.11
SMARCC2-210ENST00000550519 PYROXD2Q8N2H3 581 aa21.96■■□□□ 1.11
SMARCC2-210ENST00000550519 TP53I13Q8NBR0 393 aaPredicted RBP21.96■■□□□ 1.11
SMARCC2-210ENST00000550519 KCNE4Q8WWG9 221 aa21.96■■□□□ 1.11
SMARCC2-210ENST00000550519 ATXN7L3BQ96GX2 97 aa21.96■■□□□ 1.11
SMARCC2-210ENST00000550519 LRRC61Q9BV99 259 aa21.96■■□□□ 1.11
SMARCC2-210ENST00000550519 KLC2Q9H0B6 622 aa21.96■■□□□ 1.11
SMARCC2-210ENST00000550519 SATB2Q9UPW6 733 aa21.96■■□□□ 1.11
SMARCC2-210ENST00000550519 SIK3Q9Y2K2 1263 aa21.96■■□□□ 1.11
SMARCC2-210ENST00000550519 SSUH2Q9Y2M2 353 aa21.96■■□□□ 1.11
SMARCC2-210ENST00000550519 COL27A1Q8IZC6 1860 aaPredicted RBP21.95■■□□□ 1.1
SMARCC2-210ENST00000550519 MUSKO15146 869 aa21.95■■□□□ 1.1
SMARCC2-210ENST00000550519 TCEA3O75764 348 aa21.95■■□□□ 1.1
SMARCC2-210ENST00000550519 IGSF6O95976 241 aa21.95■■□□□ 1.1
SMARCC2-210ENST00000550519 EPHB2P29323 1055 aa21.95■■□□□ 1.1
SMARCC2-210ENST00000550519 EIF4A3P38919 411 aaKnown RBP21.95■■□□□ 1.1
SMARCC2-210ENST00000550519 STAT1P42224 750 aa21.95■■□□□ 1.1
SMARCC2-210ENST00000550519 RPIAP49247 311 aa21.95■■□□□ 1.1
SMARCC2-210ENST00000550519 TMPRSS3P57727 454 aa21.95■■□□□ 1.1
SMARCC2-210ENST00000550519 YBEYP58557 167 aaPredicted RBP21.95■■□□□ 1.1
SMARCC2-210ENST00000550519 CLEC16AQ2KHT3 1053 aa21.95■■□□□ 1.1
SMARCC2-210ENST00000550519 C3orf38Q5JPI3 329 aa21.95■■□□□ 1.1
SMARCC2-210ENST00000550519 C6orf132Q5T0Z8 1188 aa21.95■■□□□ 1.1
SMARCC2-210ENST00000550519 MACC1Q6ZN28 852 aa21.95■■□□□ 1.1
SMARCC2-210ENST00000550519 RBM44Q6ZP01 1051 aaKnown RBP21.95■■□□□ 1.1
SMARCC2-210ENST00000550519 ZNF843Q8N446 348 aa21.95■■□□□ 1.1
SMARCC2-210ENST00000550519 NETO2Q8NC67 525 aa21.95■■□□□ 1.1
SMARCC2-210ENST00000550519 C3orf20Q8ND61 904 aa21.95■■□□□ 1.1
SMARCC2-210ENST00000550519 CXorf40AQ8TE69 158 aa21.95■■□□□ 1.1
SMARCC2-210ENST00000550519 GLMNQ92990 594 aa21.95■■□□□ 1.1
SMARCC2-210ENST00000550519 PRR11Q96HE9 360 aaPredicted RBP21.95■■□□□ 1.1
SMARCC2-210ENST00000550519 VCPIP1Q96JH7 1222 aa21.95■■□□□ 1.1
SMARCC2-210ENST00000550519 SLC46A1Q96NT5 459 aa21.95■■□□□ 1.1
SMARCC2-210ENST00000550519 EPAS1Q99814 870 aa21.95■■□□□ 1.1
SMARCC2-210ENST00000550519 SELENOOQ9BVL4 669 aa21.95■■□□□ 1.1
SMARCC2-210ENST00000550519 C1QTNF7Q9BXJ2 289 aa21.95■■□□□ 1.1
SMARCC2-210ENST00000550519 DPH1Q9BZG8 443 aa21.95■■□□□ 1.1
SMARCC2-210ENST00000550519 SLC13A1Q9BZW2 595 aa21.95■■□□□ 1.1
SMARCC2-210ENST00000550519 CLPBQ9H078 707 aa21.95■■□□□ 1.1
SMARCC2-210ENST00000550519 PCDHGA8Q9Y5G5 932 aa21.95■■□□□ 1.1
SMARCC2-210ENST00000550519 ZNF462Q96JM2 2506 aa21.95■■□□□ 1.1
SMARCC2-210ENST00000550519 SIGLEC16A6NMB1 481 aa21.94■■□□□ 1.1
SMARCC2-210ENST00000550519 ERVH48-1M5A8F1 160 aa21.94■■□□□ 1.1
SMARCC2-210ENST00000550519 YY2O15391 372 aa21.94■■□□□ 1.1
SMARCC2-210ENST00000550519 ANXA6P08133 673 aa21.94■■□□□ 1.1
SMARCC2-210ENST00000550519 RHOAP61586 193 aa21.94■■□□□ 1.1
SMARCC2-210ENST00000550519 SKOR1P84550 965 aa21.94■■□□□ 1.1
SMARCC2-210ENST00000550519 C1QBPQ07021 282 aaKnown RBP21.94■■□□□ 1.1
SMARCC2-210ENST00000550519 KLHL40Q2TBA0 621 aa21.94■■□□□ 1.1
SMARCC2-210ENST00000550519 TMEM52BQ4KMG9 183 aa21.94■■□□□ 1.1
SMARCC2-210ENST00000550519 CRTC1Q6UUV9 634 aa21.94■■□□□ 1.1
SMARCC2-210ENST00000550519 ZNF354CQ86Y25 554 aa21.94■■□□□ 1.1
SMARCC2-210ENST00000550519 NAT6Q93015 286 aa21.94■■□□□ 1.1
SMARCC2-210ENST00000550519 CPEB1Q9BZB8 566 aaKnown RBP21.94■■□□□ 1.1
SMARCC2-210ENST00000550519 CPNE5Q9HCH3 593 aa21.94■■□□□ 1.1
SMARCC2-210ENST00000550519 TCRBV5S1A1TA0A578 114 aa21.93■■□□□ 1.1
SMARCC2-210ENST00000550519 WASH4PA8MWX3 477 aa21.93■■□□□ 1.1
SMARCC2-210ENST00000550519 RASA4BC9J798 803 aa21.93■■□□□ 1.1
SMARCC2-210ENST00000550519 KLK10O43240 276 aa21.93■■□□□ 1.1
SMARCC2-210ENST00000550519 RASA4O43374 803 aa21.93■■□□□ 1.1
SMARCC2-210ENST00000550519 CALB1P05937 261 aa21.93■■□□□ 1.1
SMARCC2-210ENST00000550519 TSHRP16473 764 aa21.93■■□□□ 1.1
SMARCC2-210ENST00000550519 RBMS1P29558 406 aaKnown RBP21.93■■□□□ 1.1
SMARCC2-210ENST00000550519 SUOXP51687 545 aa21.93■■□□□ 1.1
SMARCC2-210ENST00000550519 PPARDQ03181 441 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms