RNA–Protein interactions for RNA: ENST00000550411.5

CBX5-204, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-204ENST00000550411 TBC1D3EA0A087X179 549 aa7□□□□□ -1.29
CBX5-204ENST00000550411 TBC1D3KA0A087X1G2 549 aa7□□□□□ -1.29
CBX5-204ENST00000550411 TBC1D3FA6NER0 549 aaPredicted RBP7□□□□□ -1.29
CBX5-204ENST00000550411 TBC1D3LB9A6J9 549 aa7□□□□□ -1.29
CBX5-204ENST00000550411 TLR4O00206 839 aa7□□□□□ -1.29
CBX5-204ENST00000550411 ATXN7O15265 892 aaPredicted RBP7□□□□□ -1.29
CBX5-204ENST00000550411 RRP8O43159 456 aaKnown RBP7□□□□□ -1.29
CBX5-204ENST00000550411 SPINT1O43278 529 aa7□□□□□ -1.29
CBX5-204ENST00000550411 MAGEC1O60732 1142 aa7□□□□□ -1.29
CBX5-204ENST00000550411 SRGAP2O75044 1071 aa7□□□□□ -1.29
CBX5-204ENST00000550411 LRCH4O75427 683 aa7□□□□□ -1.29
CBX5-204ENST00000550411 IL1BP01584 269 aa7□□□□□ -1.29
CBX5-204ENST00000550411 FTLP02792 175 aaPredicted RBP7□□□□□ -1.29
CBX5-204ENST00000550411 PRB1P04280 392 aa7□□□□□ -1.29
CBX5-204ENST00000550411 TBC1D3HP0C7X1 549 aa7□□□□□ -1.29
CBX5-204ENST00000550411 FAM228BP0C875 321 aa7□□□□□ -1.29
CBX5-204ENST00000550411 GZMAP12544 262 aa7□□□□□ -1.29
CBX5-204ENST00000550411 RHOQP17081 205 aa7□□□□□ -1.29
CBX5-204ENST00000550411 GOT1P17174 413 aa7□□□□□ -1.29
CBX5-204ENST00000550411 TNFAIP3P21580 790 aa7□□□□□ -1.29
CBX5-204ENST00000550411 C5AR1P21730 350 aa7□□□□□ -1.29
CBX5-204ENST00000550411 HNRNPH3P31942 346 aaKnown RBP7□□□□□ -1.29
CBX5-204ENST00000550411 RXRGP48443 463 aa7□□□□□ -1.29
CBX5-204ENST00000550411 SERPINH1P50454 418 aaKnown RBP7□□□□□ -1.29
CBX5-204ENST00000550411 ADPRHP54922 357 aa7□□□□□ -1.29
CBX5-204ENST00000550411 OXCT1P55809 520 aa7□□□□□ -1.29
CBX5-204ENST00000550411 UBASH3AP57075 661 aa7□□□□□ -1.29
CBX5-204ENST00000550411 NXPH1P58417 271 aa7□□□□□ -1.29
CBX5-204ENST00000550411 TAS2R38P59533 333 aa7□□□□□ -1.29
CBX5-204ENST00000550411 ZBED6P86452 979 aa7□□□□□ -1.29
CBX5-204ENST00000550411 SEMG2Q02383 582 aa7□□□□□ -1.29
CBX5-204ENST00000550411 GNA12Q03113 381 aa7□□□□□ -1.29
CBX5-204ENST00000550411 KLHL30Q0D2K2 578 aa7□□□□□ -1.29
CBX5-204ENST00000550411 CNTN1Q12860 1018 aa7□□□□□ -1.29
CBX5-204ENST00000550411 TARDBPQ13148 414 aaKnown RBP eCLIP7□□□□□ -1.29
CBX5-204ENST00000550411 RTP5Q14D33 572 aa7□□□□□ -1.29
CBX5-204ENST00000550411 DLG2Q15700 870 aa7□□□□□ -1.29
CBX5-204ENST00000550411 POM121L1PQ3SYA9 428 aa7□□□□□ -1.29
CBX5-204ENST00000550411 HES3Q5TGS1 186 aa7□□□□□ -1.29
CBX5-204ENST00000550411 TBC1D3GQ6DHY5 549 aa7□□□□□ -1.29
CBX5-204ENST00000550411 TBC1D3CQ6IPX1 549 aa7□□□□□ -1.29
CBX5-204ENST00000550411 LRRC31Q6UY01 552 aa7□□□□□ -1.29
CBX5-204ENST00000550411 ZNF783Q6ZMS7 281 aa7□□□□□ -1.29
CBX5-204ENST00000550411 PRPF39Q86UA1 669 aaKnown RBP7□□□□□ -1.29
CBX5-204ENST00000550411 TBC1D3Q8IZP1 549 aaPredicted RBP7□□□□□ -1.29
CBX5-204ENST00000550411 RTL3Q8N8U3 475 aaKnown RBP7□□□□□ -1.29
CBX5-204ENST00000550411 MFSD2AQ8NA29 543 aa7□□□□□ -1.29
CBX5-204ENST00000550411 OR14C36Q8NHC7 312 aa7□□□□□ -1.29
CBX5-204ENST00000550411 SYN2Q92777 582 aaPredicted RBP7□□□□□ -1.29
CBX5-204ENST00000550411 RNF166Q96A37 237 aaPredicted RBP7□□□□□ -1.29
CBX5-204ENST00000550411 ARRDC3Q96B67 414 aa7□□□□□ -1.29
CBX5-204ENST00000550411 ZNF653Q96CK0 615 aa7□□□□□ -1.29
CBX5-204ENST00000550411 TBC1D31Q96DN5 1066 aa7□□□□□ -1.29
CBX5-204ENST00000550411 SERAC1Q96JX3 654 aa7□□□□□ -1.29
CBX5-204ENST00000550411 C2orf49Q9BVC5 232 aaPredicted RBP7□□□□□ -1.29
CBX5-204ENST00000550411 MUC3BQ9H195 1237 aa7□□□□□ -1.29
CBX5-204ENST00000550411 ISCUQ9H1K1 167 aa7□□□□□ -1.29
CBX5-204ENST00000550411 PRORYQ9H606 182 aa7□□□□□ -1.29
CBX5-204ENST00000550411 ERVMER34-1Q9H9K5 563 aa7□□□□□ -1.29
CBX5-204ENST00000550411 ETNK1Q9HBU6 452 aa7□□□□□ -1.29
CBX5-204ENST00000550411 TMEM51Q9NW97 253 aa7□□□□□ -1.29
CBX5-204ENST00000550411 SLC25A13Q9UJS0 675 aa7□□□□□ -1.29
CBX5-204ENST00000550411 PPM1HQ9ULR3 514 aa7□□□□□ -1.29
CBX5-204ENST00000550411 WASF2Q9Y6W5 498 aa7□□□□□ -1.29
CBX5-204ENST00000550411 MCF2LO15068 1137 aa6.99□□□□□ -1.29
CBX5-204ENST00000550411 ALOX15BO15296 676 aa6.99□□□□□ -1.29
CBX5-204ENST00000550411 LATO43561 262 aa6.99□□□□□ -1.29
CBX5-204ENST00000550411 NDUFB5O43674 189 aa6.99□□□□□ -1.29
CBX5-204ENST00000550411 RTN2O75298 545 aa6.99□□□□□ -1.29
CBX5-204ENST00000550411 ZIC2O95409 532 aaPredicted RBP6.99□□□□□ -1.29
CBX5-204ENST00000550411 CCDC172P0C7W6 258 aa6.99□□□□□ -1.29
CBX5-204ENST00000550411 ACP1P24666 158 aa6.99□□□□□ -1.29
CBX5-204ENST00000550411 IL1R2P27930 398 aa6.99□□□□□ -1.29
CBX5-204ENST00000550411 MIPP30301 263 aa6.99□□□□□ -1.29
CBX5-204ENST00000550411 OR1E1P30953 314 aa6.99□□□□□ -1.29
CBX5-204ENST00000550411 CASP14P31944 242 aa6.99□□□□□ -1.29
CBX5-204ENST00000550411 L1CAMP32004 1257 aa6.99□□□□□ -1.29
CBX5-204ENST00000550411 MAPKAPK2P49137 400 aa6.99□□□□□ -1.29
CBX5-204ENST00000550411 SKOR1P84550 965 aa6.99□□□□□ -1.29
CBX5-204ENST00000550411 ILKQ13418 452 aa6.99□□□□□ -1.29
CBX5-204ENST00000550411 NFKBIBQ15653 356 aa6.99□□□□□ -1.29
CBX5-204ENST00000550411 ASTE1Q2TB18 679 aaPredicted RBP6.99□□□□□ -1.29
CBX5-204ENST00000550411 SKOR2Q2VWA4 1001 aaPredicted RBP6.99□□□□□ -1.29
CBX5-204ENST00000550411 TDRD12Q587J7 1177 aaKnown RBP6.99□□□□□ -1.29
CBX5-204ENST00000550411 ACBD5Q5T8D3 534 aaPredicted RBP6.99□□□□□ -1.29
CBX5-204ENST00000550411 PIP5KL1Q5T9C9 394 aa6.99□□□□□ -1.29
CBX5-204ENST00000550411 TXNRD3NBQ6F5E7 133 aa6.99□□□□□ -1.29
CBX5-204ENST00000550411 NAPEPLDQ6IQ20 393 aa6.99□□□□□ -1.29
CBX5-204ENST00000550411 RWDD4Q6NW29 188 aaKnown RBP6.99□□□□□ -1.29
CBX5-204ENST00000550411 C16orf46Q6P387 395 aa6.99□□□□□ -1.29
CBX5-204ENST00000550411 DCUN1D2Q6PH85 259 aa6.99□□□□□ -1.29
CBX5-204ENST00000550411 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.99□□□□□ -1.29
CBX5-204ENST00000550411 LEKR1Q6ZMV7 388 aa6.99□□□□□ -1.29
CBX5-204ENST00000550411 DPY19L3Q6ZPD9 716 aa6.99□□□□□ -1.29
CBX5-204ENST00000550411 VASH1Q7L8A9 365 aaPredicted RBP6.99□□□□□ -1.29
CBX5-204ENST00000550411 SLFN11Q7Z7L1 901 aa6.99□□□□□ -1.29
CBX5-204ENST00000550411 SPATS2Q86XZ4 545 aaKnown RBP6.99□□□□□ -1.29
CBX5-204ENST00000550411 VSTM4Q8IW00 320 aa6.99□□□□□ -1.29
CBX5-204ENST00000550411 ARHGAP12Q8IWW6 846 aa6.99□□□□□ -1.29
CBX5-204ENST00000550411 CACTIN-AS1Q8N1I8 211 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms