RNA–Protein interactions for RNA: ENST00000550267.1

VPS29-208, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 810 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-208ENST00000550267 C2orf49Q9BVC5 232 aaPredicted RBP10.68□□□□□ -0.7
VPS29-208ENST00000550267 FOXP3Q9BZS1 431 aa10.68□□□□□ -0.7
VPS29-208ENST00000550267 CLPBQ9H078 707 aa10.68□□□□□ -0.7
VPS29-208ENST00000550267 SIK2Q9H0K1 926 aa10.68□□□□□ -0.7
VPS29-208ENST00000550267 GPAMQ9HCL2 828 aa10.68□□□□□ -0.7
VPS29-208ENST00000550267 GULP1Q9UBP9 304 aa10.68□□□□□ -0.7
VPS29-208ENST00000550267 PISDQ9UG56 409 aa10.68□□□□□ -0.7
VPS29-208ENST00000550267 ARMCX3Q9UH62 379 aaPredicted RBP10.68□□□□□ -0.7
VPS29-208ENST00000550267 ACSL6Q9UKU0 697 aa10.68□□□□□ -0.7
VPS29-208ENST00000550267 PADI4Q9UM07 663 aa10.68□□□□□ -0.7
VPS29-208ENST00000550267 TDRD6O60522 2096 aaKnown RBP10.68□□□□□ -0.7
VPS29-208ENST00000550267 A0A0D9SEW6 157 aa10.67□□□□□ -0.7
VPS29-208ENST00000550267 IGLON5A6NGN9 336 aa10.67□□□□□ -0.7
VPS29-208ENST00000550267 LMO7DNF2Z398 122 aa10.67□□□□□ -0.7
VPS29-208ENST00000550267 AGRPO00253 132 aa10.67□□□□□ -0.7
VPS29-208ENST00000550267 YY2O15391 372 aa10.67□□□□□ -0.7
VPS29-208ENST00000550267 AP1G1O43747 822 aa10.67□□□□□ -0.7
VPS29-208ENST00000550267 PPFIA2O75334 1257 aa10.67□□□□□ -0.7
VPS29-208ENST00000550267 PAGE1O75459 146 aa10.67□□□□□ -0.7
VPS29-208ENST00000550267 GP1BBP13224 206 aa10.67□□□□□ -0.7
VPS29-208ENST00000550267 ITGB7P26010 798 aa10.67□□□□□ -0.7
VPS29-208ENST00000550267 L1CAMP32004 1257 aa10.67□□□□□ -0.7
VPS29-208ENST00000550267 PRCPP42785 496 aa10.67□□□□□ -0.7
VPS29-208ENST00000550267 RECQLP46063 649 aaPredicted RBP10.67□□□□□ -0.7
VPS29-208ENST00000550267 INHBCP55103 352 aa10.67□□□□□ -0.7
VPS29-208ENST00000550267 CCL7P80098 99 aa10.67□□□□□ -0.7
VPS29-208ENST00000550267 FKBP3Q00688 224 aaKnown RBP10.67□□□□□ -0.7
VPS29-208ENST00000550267 NME3Q13232 169 aa10.67□□□□□ -0.7
VPS29-208ENST00000550267 SGCGQ13326 291 aa10.67□□□□□ -0.7
VPS29-208ENST00000550267 EIF3IQ13347 325 aaKnown RBP10.67□□□□□ -0.7
VPS29-208ENST00000550267 CLCA4Q14CN2 919 aa10.67□□□□□ -0.7
VPS29-208ENST00000550267 C5orf22Q49AR2 442 aa10.67□□□□□ -0.7
VPS29-208ENST00000550267 MANEAQ5SRI9 462 aa10.67□□□□□ -0.7
VPS29-208ENST00000550267 ESRP1Q6NXG1 681 aaKnown RBP10.67□□□□□ -0.7
VPS29-208ENST00000550267 SDR16C5Q8N3Y7 309 aa10.67□□□□□ -0.7
VPS29-208ENST00000550267 DCAF4L2Q8NA75 395 aa10.67□□□□□ -0.7
VPS29-208ENST00000550267 LMO3Q8TAP4 145 aa10.67□□□□□ -0.7
VPS29-208ENST00000550267 HTR3CQ8WXA8 447 aa10.67□□□□□ -0.7
VPS29-208ENST00000550267 CCDC74AQ96AQ1 378 aa10.67□□□□□ -0.7
VPS29-208ENST00000550267 SLC2A13Q96QE2 648 aa10.67□□□□□ -0.7
VPS29-208ENST00000550267 GFM1Q96RP9 751 aaKnown RBP10.67□□□□□ -0.7
VPS29-208ENST00000550267 TSG101Q99816 390 aa10.67□□□□□ -0.7
VPS29-208ENST00000550267 CPEB1Q9BZB8 566 aaKnown RBP10.67□□□□□ -0.7
VPS29-208ENST00000550267 STRADBQ9C0K7 418 aa10.67□□□□□ -0.7
VPS29-208ENST00000550267 METTL14Q9HCE5 456 aaKnown RBP10.67□□□□□ -0.7
VPS29-208ENST00000550267 SIRPGQ9P1W8 387 aa10.67□□□□□ -0.7
VPS29-208ENST00000550267 SEPT3Q9UH03 358 aa10.67□□□□□ -0.7
VPS29-208ENST00000550267 GGT7Q9UJ14 662 aa10.67□□□□□ -0.7
VPS29-208ENST00000550267 ITM2BQ9Y287 266 aa10.67□□□□□ -0.7
VPS29-208ENST00000550267 SNX10Q9Y5X0 201 aa10.67□□□□□ -0.7
VPS29-208ENST00000550267 FAM237AA0A1B0GTK4 181 aa10.66□□□□□ -0.7
VPS29-208ENST00000550267 TRIM49BA6NDI0 452 aa10.66□□□□□ -0.7
VPS29-208ENST00000550267 D6RAR5 112 aa10.66□□□□□ -0.7
VPS29-208ENST00000550267 ZNF821O75541 412 aaPredicted RBP10.66□□□□□ -0.7
VPS29-208ENST00000550267 GRAP2O75791 330 aa10.66□□□□□ -0.7
VPS29-208ENST00000550267 ADCY5O95622 1261 aa10.66□□□□□ -0.7
VPS29-208ENST00000550267 RPLP0P05388 317 aaKnown RBP10.66□□□□□ -0.7
VPS29-208ENST00000550267 JMJD7P0C870 316 aa10.66□□□□□ -0.7
VPS29-208ENST00000550267 KRT5P13647 590 aa10.66□□□□□ -0.7
VPS29-208ENST00000550267 TSHRP16473 764 aa10.66□□□□□ -0.7
VPS29-208ENST00000550267 ITIH1P19827 911 aa10.66□□□□□ -0.7
VPS29-208ENST00000550267 IGFALSP35858 605 aa10.66□□□□□ -0.7
VPS29-208ENST00000550267 ABL2P42684 1182 aa10.66□□□□□ -0.7
VPS29-208ENST00000550267 DNA2P51530 1060 aa10.66□□□□□ -0.7
VPS29-208ENST00000550267 THOP1P52888 689 aa10.66□□□□□ -0.7
VPS29-208ENST00000550267 PDCLQ13371 301 aa10.66□□□□□ -0.7
VPS29-208ENST00000550267 TCEA2Q15560 299 aa10.66□□□□□ -0.7
VPS29-208ENST00000550267 FAXCQ5TGI0 409 aa10.66□□□□□ -0.7
VPS29-208ENST00000550267 ZFAND4Q86XD8 727 aa10.66□□□□□ -0.7
VPS29-208ENST00000550267 PTRH1Q86Y79 214 aaKnown RBP10.66□□□□□ -0.7
VPS29-208ENST00000550267 GOLGA6L1Q8N7Z2 621 aa10.66□□□□□ -0.7
VPS29-208ENST00000550267 KYQ8NBH2 561 aa10.66□□□□□ -0.7
VPS29-208ENST00000550267 DENND6BQ8NEG7 585 aa10.66□□□□□ -0.7
VPS29-208ENST00000550267 OR7D4Q8NG98 312 aa10.66□□□□□ -0.7
VPS29-208ENST00000550267 EDARADDQ8WWZ3 215 aa10.66□□□□□ -0.7
VPS29-208ENST00000550267 TBATAQ96M53 351 aa10.66□□□□□ -0.7
VPS29-208ENST00000550267 KREMEN1Q96MU8 473 aa10.66□□□□□ -0.7
VPS29-208ENST00000550267 HEPHQ9BQS7 1158 aa10.66□□□□□ -0.7
VPS29-208ENST00000550267 FUCA2Q9BTY2 467 aa10.66□□□□□ -0.7
VPS29-208ENST00000550267 SLC13A1Q9BZW2 595 aa10.66□□□□□ -0.7
VPS29-208ENST00000550267 SLC25A18Q9H1K4 315 aa10.66□□□□□ -0.7
VPS29-208ENST00000550267 GOLPH3LQ9H4A5 285 aa10.66□□□□□ -0.7
VPS29-208ENST00000550267 ACP6Q9NPH0 428 aa10.66□□□□□ -0.7
VPS29-208ENST00000550267 ANLNQ9NQW6 1124 aa10.66□□□□□ -0.7
VPS29-208ENST00000550267 SEPT10Q9P0V9 454 aa10.66□□□□□ -0.7
VPS29-208ENST00000550267 LOXL2Q9Y4K0 774 aa10.66□□□□□ -0.7
VPS29-208ENST00000550267 PIEZO2Q9H5I5 2752 aa10.66□□□□□ -0.7
VPS29-208ENST00000550267 PRAMEF33A0A0G2JMD5 474 aa10.65□□□□□ -0.7
VPS29-208ENST00000550267 A0A1W2PQM1 296 aa10.65□□□□□ -0.7
VPS29-208ENST00000550267 TMX2-CTNND1H3BSU7 103 aa10.65□□□□□ -0.7
VPS29-208ENST00000550267 NEMP1O14524 444 aa10.65□□□□□ -0.7
VPS29-208ENST00000550267 NVLO15381 856 aaKnown RBP10.65□□□□□ -0.7
VPS29-208ENST00000550267 MED7O43513 233 aa10.65□□□□□ -0.7
VPS29-208ENST00000550267 TSPAN6O43657 245 aa10.65□□□□□ -0.7
VPS29-208ENST00000550267 PRAMEF10O60809 474 aa10.65□□□□□ -0.7
VPS29-208ENST00000550267 LETM1O95202 739 aaPredicted RBP10.65□□□□□ -0.7
VPS29-208ENST00000550267 CCKBRP32239 447 aa10.65□□□□□ -0.7
VPS29-208ENST00000550267 NOS2P35228 1153 aa10.65□□□□□ -0.7
VPS29-208ENST00000550267 ETV5P41161 510 aa10.65□□□□□ -0.7
VPS29-208ENST00000550267 CCNHP51946 323 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms