RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 HDAC4P56524 1084 aa13.63□□□□□ -0.23
NUP188-211ENST00000550219 SEMG2Q02383 582 aa13.63□□□□□ -0.23
NUP188-211ENST00000550219 TARDBPQ13148 414 aaKnown RBP eCLIP13.63□□□□□ -0.23
NUP188-211ENST00000550219 ARL13BQ3SXY8 428 aa13.63□□□□□ -0.23
NUP188-211ENST00000550219 ACBD5Q5T8D3 534 aaPredicted RBP13.63□□□□□ -0.23
NUP188-211ENST00000550219 FBXL19Q6PCT2 694 aa13.63□□□□□ -0.23
NUP188-211ENST00000550219 ZNF783Q6ZMS7 281 aa13.63□□□□□ -0.23
NUP188-211ENST00000550219 LEKR1Q6ZMV7 388 aa13.63□□□□□ -0.23
NUP188-211ENST00000550219 GCNT7Q6ZNI0 430 aa13.63□□□□□ -0.23
NUP188-211ENST00000550219 PARS2Q7L3T8 475 aaKnown RBP13.63□□□□□ -0.23
NUP188-211ENST00000550219 ZNF354CQ86Y25 554 aa13.63□□□□□ -0.23
NUP188-211ENST00000550219 PCDH20Q8N6Y1 951 aaKnown RBP13.63□□□□□ -0.23
NUP188-211ENST00000550219 TSC1Q92574 1164 aa13.63□□□□□ -0.23
NUP188-211ENST00000550219 NCAPGQ9BPX3 1015 aa13.63□□□□□ -0.23
NUP188-211ENST00000550219 HEPHQ9BQS7 1158 aa13.63□□□□□ -0.23
NUP188-211ENST00000550219 NDFIP2Q9NV92 336 aa13.63□□□□□ -0.23
NUP188-211ENST00000550219 UCKL1Q9NWZ5 548 aa13.63□□□□□ -0.23
NUP188-211ENST00000550219 ZNF212Q9UDV6 495 aa13.63□□□□□ -0.23
NUP188-211ENST00000550219 DNAI1Q9UI46 699 aa13.63□□□□□ -0.23
NUP188-211ENST00000550219 AK5Q9Y6K8 562 aa13.63□□□□□ -0.23
NUP188-211ENST00000550219 A6NNZ2 444 aa13.62□□□□□ -0.23
NUP188-211ENST00000550219 TRIM38O00635 465 aa13.62□□□□□ -0.23
NUP188-211ENST00000550219 ZMPSTE24O75844 475 aa13.62□□□□□ -0.23
NUP188-211ENST00000550219 C1SP09871 688 aa13.62□□□□□ -0.23
NUP188-211ENST00000550219 CDK4P11802 303 aa13.62□□□□□ -0.23
NUP188-211ENST00000550219 ADRB3P13945 408 aa13.62□□□□□ -0.23
NUP188-211ENST00000550219 ITGB7P26010 798 aa13.62□□□□□ -0.23
NUP188-211ENST00000550219 GKP32189 559 aa13.62□□□□□ -0.23
NUP188-211ENST00000550219 PCK1P35558 622 aa13.62□□□□□ -0.23
NUP188-211ENST00000550219 SLC1A1P43005 524 aa13.62□□□□□ -0.23
NUP188-211ENST00000550219 MESDQ14696 234 aa13.62□□□□□ -0.23
NUP188-211ENST00000550219 ZNF542PQ5EBM4 170 aa13.62□□□□□ -0.23
NUP188-211ENST00000550219 CARD16Q5EG05 197 aa13.62□□□□□ -0.23
NUP188-211ENST00000550219 ARTNQ5T4W7 220 aa13.62□□□□□ -0.23
NUP188-211ENST00000550219 NEK5Q6P3R8 708 aa13.62□□□□□ -0.23
NUP188-211ENST00000550219 SLC22A18ASQ8N1D0 253 aa13.62□□□□□ -0.23
NUP188-211ENST00000550219 FAM172AQ8WUF8 416 aa13.62□□□□□ -0.23
NUP188-211ENST00000550219 UBE2Q2Q8WVN8 375 aa13.62□□□□□ -0.23
NUP188-211ENST00000550219 CRELD1Q96HD1 420 aa13.62□□□□□ -0.23
NUP188-211ENST00000550219 HDAC8Q9BY41 377 aa13.62□□□□□ -0.23
NUP188-211ENST00000550219 CEP44Q9C0F1 390 aa13.62□□□□□ -0.23
NUP188-211ENST00000550219 DNAJC28Q9NX36 388 aa13.62□□□□□ -0.23
NUP188-211ENST00000550219 PPARGC1AQ9UBK2 798 aaKnown RBP13.62□□□□□ -0.23
NUP188-211ENST00000550219 OR12D3Q9UGF7 316 aa13.62□□□□□ -0.23
NUP188-211ENST00000550219 ITM2BQ9Y287 266 aa13.62□□□□□ -0.23
NUP188-211ENST00000550219 ALG6Q9Y672 507 aa13.62□□□□□ -0.23
NUP188-211ENST00000550219 CAPN6Q9Y6Q1 641 aa13.62□□□□□ -0.23
NUP188-211ENST00000550219 FREM2Q5SZK8 3169 aa13.61□□□□□ -0.23
NUP188-211ENST00000550219 FAM72CH0Y354 149 aa13.61□□□□□ -0.23
NUP188-211ENST00000550219 NEMP1O14524 444 aa13.61□□□□□ -0.23
NUP188-211ENST00000550219 LRCH4O75427 683 aa13.61□□□□□ -0.23
NUP188-211ENST00000550219 ZNF821O75541 412 aaPredicted RBP13.61□□□□□ -0.23
NUP188-211ENST00000550219 DGKAP23743 735 aa13.61□□□□□ -0.23
NUP188-211ENST00000550219 L1CAMP32004 1257 aa13.61□□□□□ -0.23
NUP188-211ENST00000550219 ABL2P42684 1182 aa13.61□□□□□ -0.23
NUP188-211ENST00000550219 ABCG1P45844 678 aa13.61□□□□□ -0.23
NUP188-211ENST00000550219 PROX2Q3B8N5 592 aa13.61□□□□□ -0.23
NUP188-211ENST00000550219 TMEM259Q4ZIN3 620 aa13.61□□□□□ -0.23
NUP188-211ENST00000550219 FAM72AQ5TYM5 149 aa13.61□□□□□ -0.23
NUP188-211ENST00000550219 FAM72DQ6L9T8 149 aa13.61□□□□□ -0.23
NUP188-211ENST00000550219 KIAA1161Q6NSJ0 714 aa13.61□□□□□ -0.23
NUP188-211ENST00000550219 ZSCAN30Q86W11 494 aa13.61□□□□□ -0.23
NUP188-211ENST00000550219 FAM72BQ86X60 149 aa13.61□□□□□ -0.23
NUP188-211ENST00000550219 CPNE8Q86YQ8 564 aa13.61□□□□□ -0.23
NUP188-211ENST00000550219 C17orf53Q8N3J3 647 aaPredicted RBP13.61□□□□□ -0.23
NUP188-211ENST00000550219 SLC25A45Q8N413 288 aa13.61□□□□□ -0.23
NUP188-211ENST00000550219 CCDC185Q8N715 623 aa13.61□□□□□ -0.23
NUP188-211ENST00000550219 TBC1D31Q96DN5 1066 aa13.61□□□□□ -0.23
NUP188-211ENST00000550219 MAGEB5Q9BZ81 275 aa13.61□□□□□ -0.23
NUP188-211ENST00000550219 SCUBE2Q9NQ36 999 aa13.61□□□□□ -0.23
NUP188-211ENST00000550219 KLHL11Q9NVR0 708 aa13.61□□□□□ -0.23
NUP188-211ENST00000550219 HECAQ9UBI9 543 aaPredicted RBP13.61□□□□□ -0.23
NUP188-211ENST00000550219 GGT7Q9UJ14 662 aa13.61□□□□□ -0.23
NUP188-211ENST00000550219 KRIT1O00522 736 aa13.6□□□□□ -0.23
NUP188-211ENST00000550219 RAD51BO15315 384 aa13.6□□□□□ -0.23
NUP188-211ENST00000550219 RAMP2O60895 175 aa13.6□□□□□ -0.23
NUP188-211ENST00000550219 PALMO75781 387 aa13.6□□□□□ -0.23
NUP188-211ENST00000550219 PIAS2O75928 621 aa13.6□□□□□ -0.23
NUP188-211ENST00000550219 RNF8O76064 485 aa13.6□□□□□ -0.23
NUP188-211ENST00000550219 LRIG2O94898 1065 aa13.6□□□□□ -0.23
NUP188-211ENST00000550219 PAK4O96013 591 aaPredicted RBP13.6□□□□□ -0.23
NUP188-211ENST00000550219 UGT2B4P06133 528 aa13.6□□□□□ -0.23
NUP188-211ENST00000550219 ALPPL2P10696 532 aa13.6□□□□□ -0.23
NUP188-211ENST00000550219 MYF5P13349 255 aa13.6□□□□□ -0.23
NUP188-211ENST00000550219 RHOQP17081 205 aa13.6□□□□□ -0.23
NUP188-211ENST00000550219 DESP17661 470 aa13.6□□□□□ -0.23
NUP188-211ENST00000550219 COMTP21964 271 aa13.6□□□□□ -0.23
NUP188-211ENST00000550219 ACP1P24666 158 aa13.6□□□□□ -0.23
NUP188-211ENST00000550219 MIPP30301 263 aa13.6□□□□□ -0.23
NUP188-211ENST00000550219 ADRA1BP35368 520 aa13.6□□□□□ -0.23
NUP188-211ENST00000550219 ETFBP38117 255 aa13.6□□□□□ -0.23
NUP188-211ENST00000550219 MAPKAPK2P49137 400 aa13.6□□□□□ -0.23
NUP188-211ENST00000550219 NAP1L1P55209 391 aaKnown RBP13.6□□□□□ -0.23
NUP188-211ENST00000550219 RPS21P63220 83 aaKnown RBP13.6□□□□□ -0.23
NUP188-211ENST00000550219 INSM1Q01101 510 aaPredicted RBP13.6□□□□□ -0.23
NUP188-211ENST00000550219 SLC20A2Q08357 652 aa13.6□□□□□ -0.23
NUP188-211ENST00000550219 ZNF211Q13398 564 aaPredicted RBP13.6□□□□□ -0.23
NUP188-211ENST00000550219 ILKQ13418 452 aa13.6□□□□□ -0.23
NUP188-211ENST00000550219 FGL2Q14314 439 aa13.6□□□□□ -0.23
NUP188-211ENST00000550219 POLD3Q15054 466 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms