RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 PCDHGA12O60330 932 aa17.43■□□□□ 0.38
CHMP1A-208ENST00000550102 XPAP23025 273 aaPredicted RBP17.43■□□□□ 0.38
CHMP1A-208ENST00000550102 SERPINA4P29622 427 aa17.43■□□□□ 0.38
CHMP1A-208ENST00000550102 RGRP47804 291 aa17.43■□□□□ 0.38
CHMP1A-208ENST00000550102 CSNK1DP48730 415 aa17.43■□□□□ 0.38
CHMP1A-208ENST00000550102 RENBPP51606 427 aa17.43■□□□□ 0.38
CHMP1A-208ENST00000550102 SUOXP51687 545 aa17.43■□□□□ 0.38
CHMP1A-208ENST00000550102 LBRQ14739 615 aaKnown RBP17.43■□□□□ 0.38
CHMP1A-208ENST00000550102 SUZ12Q15022 739 aaKnown RBP17.43■□□□□ 0.38
CHMP1A-208ENST00000550102 LRRC73Q5JTD7 316 aa17.43■□□□□ 0.38
CHMP1A-208ENST00000550102 GAS2L3Q86XJ1 694 aa17.43■□□□□ 0.38
CHMP1A-208ENST00000550102 CCDC170Q8IYT3 715 aa17.43■□□□□ 0.38
CHMP1A-208ENST00000550102 SETD7Q8WTS6 366 aaKnown RBP17.43■□□□□ 0.38
CHMP1A-208ENST00000550102 ZNF641Q96N77 438 aaPredicted RBP17.43■□□□□ 0.38
CHMP1A-208ENST00000550102 PSKH2Q96QS6 385 aa17.43■□□□□ 0.38
CHMP1A-208ENST00000550102 PANX2Q96RD6 677 aa17.43■□□□□ 0.38
CHMP1A-208ENST00000550102 ELF4Q99607 663 aaPredicted RBP17.43■□□□□ 0.38
CHMP1A-208ENST00000550102 FZD3Q9NPG1 666 aa17.43■□□□□ 0.38
CHMP1A-208ENST00000550102 LUC7LQ9NQ29 371 aaKnown RBP17.43■□□□□ 0.38
CHMP1A-208ENST00000550102 GGT7Q9UJ14 662 aa17.43■□□□□ 0.38
CHMP1A-208ENST00000550102 CA5BQ9Y2D0 317 aa17.43■□□□□ 0.38
CHMP1A-208ENST00000550102 A0A1B0GTQ1 180 aa17.42■□□□□ 0.38
CHMP1A-208ENST00000550102 KCNK3O14649 394 aa17.42■□□□□ 0.38
CHMP1A-208ENST00000550102 IL4RP24394 825 aa17.42■□□□□ 0.38
CHMP1A-208ENST00000550102 CYLC1P35663 651 aaPredicted RBP17.42■□□□□ 0.38
CHMP1A-208ENST00000550102 HSPA9P38646 679 aaKnown RBP17.42■□□□□ 0.38
CHMP1A-208ENST00000550102 GRK6P43250 576 aa17.42■□□□□ 0.38
CHMP1A-208ENST00000550102 ARRB1P49407 418 aaPredicted RBP17.42■□□□□ 0.38
CHMP1A-208ENST00000550102 AP1S1P61966 158 aa17.42■□□□□ 0.38
CHMP1A-208ENST00000550102 SIM1P81133 766 aaPredicted RBP17.42■□□□□ 0.38
CHMP1A-208ENST00000550102 IL9RQ01113 521 aa17.42■□□□□ 0.38
CHMP1A-208ENST00000550102 TCEAL1Q15170 157 aa17.42■□□□□ 0.38
CHMP1A-208ENST00000550102 ATP13A4Q4VNC1 1196 aa17.42■□□□□ 0.38
CHMP1A-208ENST00000550102 BRAT1Q6PJG6 821 aa17.42■□□□□ 0.38
CHMP1A-208ENST00000550102 SRLQ86TD4 932 aa17.42■□□□□ 0.38
CHMP1A-208ENST00000550102 TTC7BQ86TV6 843 aa17.42■□□□□ 0.38
CHMP1A-208ENST00000550102 LRRC49Q8IUZ0 686 aa17.42■□□□□ 0.38
CHMP1A-208ENST00000550102 BBS5Q8N3I7 341 aa17.42■□□□□ 0.38
CHMP1A-208ENST00000550102 NSMCE1Q8WV22 266 aa17.42■□□□□ 0.38
CHMP1A-208ENST00000550102 FAF2Q96CS3 445 aa17.42■□□□□ 0.38
CHMP1A-208ENST00000550102 CAMK1GQ96NX5 476 aa17.42■□□□□ 0.38
CHMP1A-208ENST00000550102 SLC17A9Q9BYT1 436 aa17.42■□□□□ 0.38
CHMP1A-208ENST00000550102 ERVMER34-1Q9H9K5 563 aa17.42■□□□□ 0.38
CHMP1A-208ENST00000550102 PCOLCE2Q9UKZ9 415 aa17.42■□□□□ 0.38
CHMP1A-208ENST00000550102 PCDHB9Q9Y5E1 797 aa17.42■□□□□ 0.38
CHMP1A-208ENST00000550102 TDRD6O60522 2096 aaKnown RBP17.42■□□□□ 0.38
CHMP1A-208ENST00000550102 TPRP12270 2363 aaKnown RBP17.42■□□□□ 0.38
CHMP1A-208ENST00000550102 SPAARA0A1B0GVQ0 90 aa17.41■□□□□ 0.38
CHMP1A-208ENST00000550102 LRRD1A4D1F6 860 aa17.41■□□□□ 0.38
CHMP1A-208ENST00000550102 A6NNZ2 444 aa17.41■□□□□ 0.38
CHMP1A-208ENST00000550102 MAFKO60675 156 aa17.41■□□□□ 0.38
CHMP1A-208ENST00000550102 LCA5LO95447 670 aa17.41■□□□□ 0.38
CHMP1A-208ENST00000550102 PMLP29590 882 aa17.41■□□□□ 0.38
CHMP1A-208ENST00000550102 NSUN2Q08J23 767 aaKnown RBP eCLIP17.41■□□□□ 0.38
CHMP1A-208ENST00000550102 SLC10A7Q0GE19 358 aa17.41■□□□□ 0.38
CHMP1A-208ENST00000550102 ELP6Q0PNE2 266 aa17.41■□□□□ 0.38
CHMP1A-208ENST00000550102 SGCGQ13326 291 aa17.41■□□□□ 0.38
CHMP1A-208ENST00000550102 PAFAH1B3Q15102 231 aaKnown RBP17.41■□□□□ 0.38
CHMP1A-208ENST00000550102 SPA17Q15506 151 aa17.41■□□□□ 0.38
CHMP1A-208ENST00000550102 ANKRD20A8PQ5CZ79 823 aa17.41■□□□□ 0.38
CHMP1A-208ENST00000550102 NCBP2-AS2Q69YL0 99 aa17.41■□□□□ 0.38
CHMP1A-208ENST00000550102 GCNT7Q6ZNI0 430 aa17.41■□□□□ 0.38
CHMP1A-208ENST00000550102 PTAR1Q7Z6K3 402 aaPredicted RBP17.41■□□□□ 0.38
CHMP1A-208ENST00000550102 SPATS2Q86XZ4 545 aaKnown RBP17.41■□□□□ 0.38
CHMP1A-208ENST00000550102 PAF1Q8N7H5 531 aa17.41■□□□□ 0.38
CHMP1A-208ENST00000550102 DENND6BQ8NEG7 585 aa17.41■□□□□ 0.38
CHMP1A-208ENST00000550102 PCDH19Q8TAB3 1148 aa17.41■□□□□ 0.38
CHMP1A-208ENST00000550102 FAM174AQ8TBP5 190 aa17.41■□□□□ 0.38
CHMP1A-208ENST00000550102 HCAR2Q8TDS4 363 aa17.41■□□□□ 0.38
CHMP1A-208ENST00000550102 KLHDC7BQ96G42 594 aa17.41■□□□□ 0.38
CHMP1A-208ENST00000550102 C1QTNF2Q9BXJ5 285 aa17.41■□□□□ 0.38
CHMP1A-208ENST00000550102 SUV39H2Q9H5I1 410 aa17.41■□□□□ 0.38
CHMP1A-208ENST00000550102 IGLON5A6NGN9 336 aa17.4■□□□□ 0.38
CHMP1A-208ENST00000550102 MUSKO15146 869 aa17.4■□□□□ 0.38
CHMP1A-208ENST00000550102 CBFA2T3O75081 653 aa17.4■□□□□ 0.38
CHMP1A-208ENST00000550102 PEX11BO96011 259 aa17.4■□□□□ 0.38
CHMP1A-208ENST00000550102 THEGLP0DJG4 465 aa17.4■□□□□ 0.38
CHMP1A-208ENST00000550102 TIMP2P16035 220 aa17.4■□□□□ 0.38
CHMP1A-208ENST00000550102 GARSP41250 739 aaKnown RBP17.4■□□□□ 0.38
CHMP1A-208ENST00000550102 MAGEA1P43355 309 aa17.4■□□□□ 0.38
CHMP1A-208ENST00000550102 BCL2L1Q07817 233 aa17.4■□□□□ 0.38
CHMP1A-208ENST00000550102 GALNT2Q10471 571 aa17.4■□□□□ 0.38
CHMP1A-208ENST00000550102 FGL2Q14314 439 aa17.4■□□□□ 0.38
CHMP1A-208ENST00000550102 LRRC38Q5VT99 294 aa17.4■□□□□ 0.38
CHMP1A-208ENST00000550102 KYAT3Q6YP21 454 aaKnown RBP17.4■□□□□ 0.38
CHMP1A-208ENST00000550102 ABI3BPQ7Z7G0 1075 aa17.4■□□□□ 0.38
CHMP1A-208ENST00000550102 CAMK1DQ8IU85 385 aa17.4■□□□□ 0.38
CHMP1A-208ENST00000550102 CXorf40AQ8TE69 158 aa17.4■□□□□ 0.38
CHMP1A-208ENST00000550102 ASB12Q8WXK4 309 aa17.4■□□□□ 0.38
CHMP1A-208ENST00000550102 CDC6Q99741 560 aa17.4■□□□□ 0.38
CHMP1A-208ENST00000550102 C1QTNF7Q9BXJ2 289 aa17.4■□□□□ 0.38
CHMP1A-208ENST00000550102 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.39■□□□□ 0.37
CHMP1A-208ENST00000550102 ZNF487B1APH4 448 aa17.39■□□□□ 0.37
CHMP1A-208ENST00000550102 SPOPO43791 374 aa17.39■□□□□ 0.37
CHMP1A-208ENST00000550102 BUB1BO60566 1050 aaPredicted RBP17.39■□□□□ 0.37
CHMP1A-208ENST00000550102 IPO7O95373 1038 aaKnown RBP17.39■□□□□ 0.37
CHMP1A-208ENST00000550102 KRT1P04264 644 aa17.39■□□□□ 0.37
CHMP1A-208ENST00000550102 FECHP22830 423 aa17.39■□□□□ 0.37
CHMP1A-208ENST00000550102 EPHA8P29322 1005 aaPredicted RBP17.39■□□□□ 0.37
CHMP1A-208ENST00000550102 MMP12P39900 470 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms