RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 DOLKQ9UPQ8 538 aa13.76□□□□□ -0.21
TROAP-211ENST00000549891 SSUH2Q9Y2M2 353 aa13.76□□□□□ -0.21
TROAP-211ENST00000549891 CCDC187A0A096LP49 1063 aa13.75□□□□□ -0.21
TROAP-211ENST00000549891 FAM170AA1A519 330 aa13.75□□□□□ -0.21
TROAP-211ENST00000549891 TMEM110-MUSTN1A8MSY1 372 aa13.75□□□□□ -0.21
TROAP-211ENST00000549891 CDRT15L2A8MXV6 281 aa13.75□□□□□ -0.21
TROAP-211ENST00000549891 F8VZ95 297 aa13.75□□□□□ -0.21
TROAP-211ENST00000549891 TMX2-CTNND1H3BSU7 103 aa13.75□□□□□ -0.21
TROAP-211ENST00000549891 K7ENP7 123 aa13.75□□□□□ -0.21
TROAP-211ENST00000549891 BUB1O43683 1085 aa13.75□□□□□ -0.21
TROAP-211ENST00000549891 KDELR3O43731 214 aa13.75□□□□□ -0.21
TROAP-211ENST00000549891 GCATO75600 419 aa13.75□□□□□ -0.21
TROAP-211ENST00000549891 IGSF6O95976 241 aa13.75□□□□□ -0.21
TROAP-211ENST00000549891 ALPIP09923 528 aa13.75□□□□□ -0.21
TROAP-211ENST00000549891 ERCC5P28715 1186 aaPredicted RBP13.75□□□□□ -0.21
TROAP-211ENST00000549891 IGFALSP35858 605 aa13.75□□□□□ -0.21
TROAP-211ENST00000549891 EIF4A3P38919 411 aaKnown RBP13.75□□□□□ -0.21
TROAP-211ENST00000549891 SUOXP51687 545 aa13.75□□□□□ -0.21
TROAP-211ENST00000549891 SKOR1P84550 965 aa13.75□□□□□ -0.21
TROAP-211ENST00000549891 ELP6Q0PNE2 266 aa13.75□□□□□ -0.21
TROAP-211ENST00000549891 ELOCQ15369 112 aa13.75□□□□□ -0.21
TROAP-211ENST00000549891 C15orf59Q2T9L4 293 aaPredicted RBP13.75□□□□□ -0.21
TROAP-211ENST00000549891 CCDC14Q49A88 953 aa13.75□□□□□ -0.21
TROAP-211ENST00000549891 PERM1Q5SV97 790 aa13.75□□□□□ -0.21
TROAP-211ENST00000549891 INO80CQ6PI98 192 aaPredicted RBP13.75□□□□□ -0.21
TROAP-211ENST00000549891 FOXR1Q6PIV2 292 aa13.75□□□□□ -0.21
TROAP-211ENST00000549891 LVRNQ6Q4G3 990 aa13.75□□□□□ -0.21
TROAP-211ENST00000549891 CRTC1Q6UUV9 634 aa13.75□□□□□ -0.21
TROAP-211ENST00000549891 CCDC81Q6ZN84 652 aa13.75□□□□□ -0.21
TROAP-211ENST00000549891 CLEC14AQ86T13 490 aa13.75□□□□□ -0.21
TROAP-211ENST00000549891 SLC35F3Q8IY50 421 aa13.75□□□□□ -0.21
TROAP-211ENST00000549891 RXFP2Q8WXD0 754 aa13.75□□□□□ -0.21
TROAP-211ENST00000549891 CCDC3Q9BQI4 270 aa13.75□□□□□ -0.21
TROAP-211ENST00000549891 LRRC61Q9BV99 259 aa13.75□□□□□ -0.21
TROAP-211ENST00000549891 TTYH3Q9C0H2 523 aa13.75□□□□□ -0.21
TROAP-211ENST00000549891 SYNDIG1Q9H7V2 258 aa13.75□□□□□ -0.21
TROAP-211ENST00000549891 PADI4Q9UM07 663 aa13.75□□□□□ -0.21
TROAP-211ENST00000549891 LRP4O75096 1905 aa13.74□□□□□ -0.21
TROAP-211ENST00000549891 YY2O15391 372 aa13.74□□□□□ -0.21
TROAP-211ENST00000549891 MMP20O60882 483 aa13.74□□□□□ -0.21
TROAP-211ENST00000549891 LRIG2O94898 1065 aa13.74□□□□□ -0.21
TROAP-211ENST00000549891 TNFSF15O95150 251 aa13.74□□□□□ -0.21
TROAP-211ENST00000549891 ITGA2BP08514 1039 aa13.74□□□□□ -0.21
TROAP-211ENST00000549891 PLEKP08567 350 aaPredicted RBP13.74□□□□□ -0.21
TROAP-211ENST00000549891 C6P13671 934 aa13.74□□□□□ -0.21
TROAP-211ENST00000549891 TSHRP16473 764 aa13.74□□□□□ -0.21
TROAP-211ENST00000549891 MMP8P22894 467 aa13.74□□□□□ -0.21
TROAP-211ENST00000549891 XPAP23025 273 aaPredicted RBP13.74□□□□□ -0.21
TROAP-211ENST00000549891 HTR1BP28222 390 aa13.74□□□□□ -0.21
TROAP-211ENST00000549891 PTPN9P43378 593 aa13.74□□□□□ -0.21
TROAP-211ENST00000549891 PEX5P50542 639 aa13.74□□□□□ -0.21
TROAP-211ENST00000549891 EIF3IQ13347 325 aaKnown RBP13.74□□□□□ -0.21
TROAP-211ENST00000549891 C1orf61Q13536 156 aa13.74□□□□□ -0.21
TROAP-211ENST00000549891 KLHL40Q2TBA0 621 aa13.74□□□□□ -0.21
TROAP-211ENST00000549891 INO80DQ53TQ3 878 aaPredicted RBP13.74□□□□□ -0.21
TROAP-211ENST00000549891 ATXN7L2Q5T6C5 722 aaPredicted RBP13.74□□□□□ -0.21
TROAP-211ENST00000549891 ARL10Q8N8L6 244 aa13.74□□□□□ -0.21
TROAP-211ENST00000549891 OR6C4Q8NGE1 309 aa13.74□□□□□ -0.21
TROAP-211ENST00000549891 ATL2Q8NHH9 583 aa13.74□□□□□ -0.21
TROAP-211ENST00000549891 TTC9Q92623 222 aa13.74□□□□□ -0.21
TROAP-211ENST00000549891 COL26A1Q96A83 441 aa13.74□□□□□ -0.21
TROAP-211ENST00000549891 LIN37Q96GY3 246 aaPredicted RBP13.74□□□□□ -0.21
TROAP-211ENST00000549891 PRR11Q96HE9 360 aaPredicted RBP13.74□□□□□ -0.21
TROAP-211ENST00000549891 EPAS1Q99814 870 aa13.74□□□□□ -0.21
TROAP-211ENST00000549891 TCEAL2Q9H3H9 227 aaPredicted RBP13.74□□□□□ -0.21
TROAP-211ENST00000549891 DKK3Q9UBP4 350 aa13.74□□□□□ -0.21
TROAP-211ENST00000549891 MFHAS1Q9Y4C4 1052 aa13.74□□□□□ -0.21
TROAP-211ENST00000549891 ANKRD36A6QL64 1941 aa13.73□□□□□ -0.21
TROAP-211ENST00000549891 A0A1W2PNU3 283 aaPredicted RBP13.73□□□□□ -0.21
TROAP-211ENST00000549891 C2CD4BA6NLJ0 364 aa13.73□□□□□ -0.21
TROAP-211ENST00000549891 B8ZZF3 427 aa13.73□□□□□ -0.21
TROAP-211ENST00000549891 FAM72CH0Y354 149 aa13.73□□□□□ -0.21
TROAP-211ENST00000549891 TMCC1O94876 653 aa13.73□□□□□ -0.21
TROAP-211ENST00000549891 CYP1A1P04798 512 aaPredicted RBP13.73□□□□□ -0.21
TROAP-211ENST00000549891 CTSEP14091 401 aa13.73□□□□□ -0.21
TROAP-211ENST00000549891 HK3P52790 923 aa13.73□□□□□ -0.21
TROAP-211ENST00000549891 RHOAP61586 193 aa13.73□□□□□ -0.21
TROAP-211ENST00000549891 CDR2Q01850 454 aa13.73□□□□□ -0.21
TROAP-211ENST00000549891 LY6DQ14210 128 aa13.73□□□□□ -0.21
TROAP-211ENST00000549891 GRM3Q14832 879 aa13.73□□□□□ -0.21
TROAP-211ENST00000549891 LRRC14Q15048 493 aa13.73□□□□□ -0.21
TROAP-211ENST00000549891 HSP90AA4PQ58FG1 418 aa13.73□□□□□ -0.21
TROAP-211ENST00000549891 LRRC73Q5JTD7 316 aa13.73□□□□□ -0.21
TROAP-211ENST00000549891 FAM72AQ5TYM5 149 aa13.73□□□□□ -0.21
TROAP-211ENST00000549891 FAM72DQ6L9T8 149 aa13.73□□□□□ -0.21
TROAP-211ENST00000549891 TRIM72Q6ZMU5 477 aa13.73□□□□□ -0.21
TROAP-211ENST00000549891 LEKR1Q6ZMV7 388 aa13.73□□□□□ -0.21
TROAP-211ENST00000549891 FAM72BQ86X60 149 aa13.73□□□□□ -0.21
TROAP-211ENST00000549891 GKN2Q86XP6 184 aa13.73□□□□□ -0.21
TROAP-211ENST00000549891 TP53I13Q8NBR0 393 aaPredicted RBP13.73□□□□□ -0.21
TROAP-211ENST00000549891 GPT2Q8TD30 523 aa13.73□□□□□ -0.21
TROAP-211ENST00000549891 FAM172AQ8WUF8 416 aa13.73□□□□□ -0.21
TROAP-211ENST00000549891 CENPIQ92674 756 aaPredicted RBP13.73□□□□□ -0.21
TROAP-211ENST00000549891 NTAN1Q96AB6 310 aa13.73□□□□□ -0.21
TROAP-211ENST00000549891 MED8Q96G25 268 aa13.73□□□□□ -0.21
TROAP-211ENST00000549891 GFM1Q96RP9 751 aaKnown RBP13.73□□□□□ -0.21
TROAP-211ENST00000549891 NCAPGQ9BPX3 1015 aa13.73□□□□□ -0.21
TROAP-211ENST00000549891 WRAP53Q9BUR4 548 aaKnown RBP13.73□□□□□ -0.21
TROAP-211ENST00000549891 CPEB1Q9BZB8 566 aaKnown RBP13.73□□□□□ -0.21
TROAP-211ENST00000549891 STRADBQ9C0K7 418 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms