RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 FBXW11Q9UKB1 542 aa16.41■□□□□ 0.22
CUX1-213ENST00000549414 TOGARAM1Q9Y4F4 1720 aa16.41■□□□□ 0.22
CUX1-213ENST00000549414 PEX1O43933 1283 aa16.41■□□□□ 0.22
CUX1-213ENST00000549414 USP1O94782 785 aa16.41■□□□□ 0.22
CUX1-213ENST00000549414 CPSF4O95639 269 aaKnown RBP16.41■□□□□ 0.22
CUX1-213ENST00000549414 ATP6V1B2P21281 511 aa16.41■□□□□ 0.22
CUX1-213ENST00000549414 AIF1P55008 147 aa16.41■□□□□ 0.22
CUX1-213ENST00000549414 PITX1P78337 314 aaPredicted RBP16.41■□□□□ 0.22
CUX1-213ENST00000549414 CHRNB3Q05901 458 aa16.41■□□□□ 0.22
CUX1-213ENST00000549414 NCBP2-AS2Q69YL0 99 aa16.41■□□□□ 0.22
CUX1-213ENST00000549414 LINGO4Q6UY18 593 aa16.41■□□□□ 0.22
CUX1-213ENST00000549414 MTFMTQ96DP5 389 aaKnown RBP16.41■□□□□ 0.22
CUX1-213ENST00000549414 MRPL57Q9BQC6 102 aaKnown RBP16.41■□□□□ 0.22
CUX1-213ENST00000549414 SEPT4O43236 478 aa16.41■□□□□ 0.22
CUX1-213ENST00000549414 MGEA5O60502 916 aa16.41■□□□□ 0.22
CUX1-213ENST00000549414 TOP3BO95985 862 aaKnown RBP16.41■□□□□ 0.22
CUX1-213ENST00000549414 C16orf87Q6PH81 154 aa16.41■□□□□ 0.22
CUX1-213ENST00000549414 IL27RAQ6UWB1 636 aa16.41■□□□□ 0.22
CUX1-213ENST00000549414 MILR1Q7Z6M3 343 aa16.41■□□□□ 0.22
CUX1-213ENST00000549414 DHFR2Q86XF0 187 aa16.41■□□□□ 0.22
CUX1-213ENST00000549414 CRYBG2Q8N1P7 616 aa16.41■□□□□ 0.22
CUX1-213ENST00000549414 DCBLD1Q8N8Z6 715 aa16.41■□□□□ 0.22
CUX1-213ENST00000549414 TBATAQ96M53 351 aa16.41■□□□□ 0.22
CUX1-213ENST00000549414 C16orf70Q9BSU1 422 aa16.41■□□□□ 0.22
CUX1-213ENST00000549414 PDP2Q9P2J9 529 aa16.41■□□□□ 0.22
CUX1-213ENST00000549414 FFAR3O14843 346 aa16.4■□□□□ 0.22
CUX1-213ENST00000549414 GPR42O15529 346 aa16.4■□□□□ 0.22
CUX1-213ENST00000549414 STAU1O95793 577 aaKnown RBP16.4■□□□□ 0.22
CUX1-213ENST00000549414 TKTP29401 623 aaKnown RBP16.4■□□□□ 0.22
CUX1-213ENST00000549414 POU5F1Q01860 360 aaKnown RBP16.4■□□□□ 0.22
CUX1-213ENST00000549414 KLF1Q13351 362 aaPredicted RBP16.4■□□□□ 0.22
CUX1-213ENST00000549414 STARD3Q14849 445 aa16.4■□□□□ 0.22
CUX1-213ENST00000549414 CYP51A1Q16850 503 aa16.4■□□□□ 0.22
CUX1-213ENST00000549414 IGDCC3Q8IVU1 814 aa16.4■□□□□ 0.22
CUX1-213ENST00000549414 CDYL2Q8N8U2 506 aa16.4■□□□□ 0.22
CUX1-213ENST00000549414 OR7D4Q8NG98 312 aa16.4■□□□□ 0.22
CUX1-213ENST00000549414 STAG3L4Q8TBR4 150 aa16.4■□□□□ 0.22
CUX1-213ENST00000549414 TTPALQ9BTX7 342 aa16.4■□□□□ 0.22
CUX1-213ENST00000549414 LRMDAQ9H2I8 198 aa16.4■□□□□ 0.22
CUX1-213ENST00000549414 MPP2Q14168 576 aa16.4■□□□□ 0.22
CUX1-213ENST00000549414 STXBP5Q5T5C0 1151 aa16.4■□□□□ 0.22
CUX1-213ENST00000549414 OR56A4Q8NGH8 313 aa16.4■□□□□ 0.22
CUX1-213ENST00000549414 DACT3Q96B18 629 aaPredicted RBP16.4■□□□□ 0.22
CUX1-213ENST00000549414 NMD3Q96D46 503 aaKnown RBP16.4■□□□□ 0.22
CUX1-213ENST00000549414 SLC25A23Q9BV35 468 aa16.4■□□□□ 0.22
CUX1-213ENST00000549414 ABCG8Q9H221 673 aa16.4■□□□□ 0.22
CUX1-213ENST00000549414 AGO1Q9UL18 857 aaKnown RBP16.4■□□□□ 0.22
CUX1-213ENST00000549414 KPNA3O00505 521 aaPredicted RBP16.4■□□□□ 0.22
CUX1-213ENST00000549414 RAD51BO15315 384 aa16.4■□□□□ 0.22
CUX1-213ENST00000549414 ADCY6O43306 1168 aa16.4■□□□□ 0.22
CUX1-213ENST00000549414 PARNO95453 639 aaKnown RBP16.4■□□□□ 0.22
CUX1-213ENST00000549414 ZNF682O95780 498 aa16.4■□□□□ 0.22
CUX1-213ENST00000549414 EDN1P05305 212 aa16.4■□□□□ 0.22
CUX1-213ENST00000549414 ARL13AQ5H913 290 aaPredicted RBP16.4■□□□□ 0.22
CUX1-213ENST00000549414 DBF4BQ8NFT6 615 aa16.4■□□□□ 0.22
CUX1-213ENST00000549414 KCTD14Q9BQ13 255 aaPredicted RBP16.4■□□□□ 0.22
CUX1-213ENST00000549414 C2orf49Q9BVC5 232 aaPredicted RBP16.4■□□□□ 0.22
CUX1-213ENST00000549414 FTHL17Q9BXU8 183 aa16.4■□□□□ 0.22
CUX1-213ENST00000549414 SEC22BO75396 215 aa16.39■□□□□ 0.21
CUX1-213ENST00000549414 EDNRBP24530 442 aa16.39■□□□□ 0.21
CUX1-213ENST00000549414 PSEN1P49768 467 aa16.39■□□□□ 0.21
CUX1-213ENST00000549414 USP41Q3LFD5 358 aa16.39■□□□□ 0.21
CUX1-213ENST00000549414 VARS2Q5ST30 1063 aaKnown RBP16.39■□□□□ 0.21
CUX1-213ENST00000549414 TAPT1Q6NXT6 567 aa16.39■□□□□ 0.21
CUX1-213ENST00000549414 DET1Q7L5Y6 550 aa16.39■□□□□ 0.21
CUX1-213ENST00000549414 MED8Q96G25 268 aa16.39■□□□□ 0.21
CUX1-213ENST00000549414 BTN2A3PQ96KV6 586 aa16.39■□□□□ 0.21
CUX1-213ENST00000549414 DPY30Q9C005 99 aa16.39■□□□□ 0.21
CUX1-213ENST00000549414 CDH19Q9H159 772 aa16.39■□□□□ 0.21
CUX1-213ENST00000549414 ZDHHC6Q9H6R6 413 aa16.39■□□□□ 0.21
CUX1-213ENST00000549414 BTAF1O14981 1849 aa16.39■□□□□ 0.21
CUX1-213ENST00000549414 CD3EAPO15446 510 aaKnown RBP16.39■□□□□ 0.21
CUX1-213ENST00000549414 LIMK2P53671 638 aa16.39■□□□□ 0.21
CUX1-213ENST00000549414 OCA2Q04671 838 aa16.39■□□□□ 0.21
CUX1-213ENST00000549414 MSLNQ13421 630 aaPredicted RBP16.39■□□□□ 0.21
CUX1-213ENST00000549414 GDF6Q6KF10 455 aaPredicted RBP16.39■□□□□ 0.21
CUX1-213ENST00000549414 VPS37AQ8NEZ2 397 aa16.39■□□□□ 0.21
CUX1-213ENST00000549414 UCMAQ8WVF2 138 aa16.39■□□□□ 0.21
CUX1-213ENST00000549414 FIG4Q92562 907 aa16.39■□□□□ 0.21
CUX1-213ENST00000549414 PSMG2Q969U7 264 aa16.39■□□□□ 0.21
CUX1-213ENST00000549414 DENND2DQ9H6A0 471 aaPredicted RBP16.39■□□□□ 0.21
CUX1-213ENST00000549414 KLQ9UEF7 1012 aa16.39■□□□□ 0.21
CUX1-213ENST00000549414 SIPA1L3O60292 1781 aaPredicted RBP16.39■□□□□ 0.21
CUX1-213ENST00000549414 GNG14A0A1W2PPG7 69 aa16.39■□□□□ 0.21
CUX1-213ENST00000549414 TTC24A2A3L6 582 aaPredicted RBP16.39■□□□□ 0.21
CUX1-213ENST00000549414 C5orf58C9J3I9 102 aa16.39■□□□□ 0.21
CUX1-213ENST00000549414 IGSF6O95976 241 aa16.39■□□□□ 0.21
CUX1-213ENST00000549414 WLSQ5T9L3 541 aa16.39■□□□□ 0.21
CUX1-213ENST00000549414 PQLC3Q8N755 202 aa16.39■□□□□ 0.21
CUX1-213ENST00000549414 OR4K2Q8NGD2 314 aa16.39■□□□□ 0.21
CUX1-213ENST00000549414 DCAKDQ8WVC6 231 aa16.39■□□□□ 0.21
CUX1-213ENST00000549414 ZNF558Q96NG5 402 aa16.39■□□□□ 0.21
CUX1-213ENST00000549414 CORO1BQ9BR76 489 aa16.39■□□□□ 0.21
CUX1-213ENST00000549414 TMEM79Q9BSE2 394 aa16.39■□□□□ 0.21
CUX1-213ENST00000549414 TBCDQ9BTW9 1192 aa16.39■□□□□ 0.21
CUX1-213ENST00000549414 C1orf50Q9BV19 199 aa16.39■□□□□ 0.21
CUX1-213ENST00000549414 SLC39A8Q9C0K1 460 aa16.39■□□□□ 0.21
CUX1-213ENST00000549414 FAM32AQ9Y421 112 aaKnown RBP16.39■□□□□ 0.21
CUX1-213ENST00000549414 RAD54BQ9Y620 910 aa16.39■□□□□ 0.21
CUX1-213ENST00000549414 C1orf232A0A0U1RR37 186 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms