RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 KRT1P04264 644 aa15.95■□□□□ 0.14
DDX54-205ENST00000548786 ADRB1P08588 477 aa15.95■□□□□ 0.14
DDX54-205ENST00000548786 CEACAM1P13688 526 aa15.95■□□□□ 0.14
DDX54-205ENST00000548786 TIMP2P16035 220 aa15.95■□□□□ 0.14
DDX54-205ENST00000548786 HNRNPA2B1P22626 353 aaKnown RBP15.95■□□□□ 0.14
DDX54-205ENST00000548786 AKT2P31751 481 aa15.95■□□□□ 0.14
DDX54-205ENST00000548786 NXPH1P58417 271 aa15.95■□□□□ 0.14
DDX54-205ENST00000548786 MAXP61244 160 aa15.95■□□□□ 0.14
DDX54-205ENST00000548786 SPA17Q15506 151 aa15.95■□□□□ 0.14
DDX54-205ENST00000548786 KIAA1161Q6NSJ0 714 aa15.95■□□□□ 0.14
DDX54-205ENST00000548786 PTAR1Q7Z6K3 402 aaPredicted RBP15.95■□□□□ 0.14
DDX54-205ENST00000548786 ZSWIM9Q86XI8 627 aa15.95■□□□□ 0.14
DDX54-205ENST00000548786 SPATS2Q86XZ4 545 aaKnown RBP15.95■□□□□ 0.14
DDX54-205ENST00000548786 FAM71BQ8TC56 605 aa15.95■□□□□ 0.14
DDX54-205ENST00000548786 SLC17A9Q9BYT1 436 aa15.95■□□□□ 0.14
DDX54-205ENST00000548786 GDF3Q9NR23 364 aa15.95■□□□□ 0.14
DDX54-205ENST00000548786 RCOR3Q9P2K3 495 aaPredicted RBP15.95■□□□□ 0.14
DDX54-205ENST00000548786 SEPT3Q9UH03 358 aa15.95■□□□□ 0.14
DDX54-205ENST00000548786 LCMT1Q9UIC8 334 aa15.95■□□□□ 0.14
DDX54-205ENST00000548786 BTBD3Q9Y2F9 522 aa15.95■□□□□ 0.14
DDX54-205ENST00000548786 PCDHB9Q9Y5E1 797 aa15.95■□□□□ 0.14
DDX54-205ENST00000548786 PCDHA13Q9Y5I0 950 aa15.95■□□□□ 0.14
DDX54-205ENST00000548786 TRPM6Q9BX84 2022 aa15.94■□□□□ 0.14
DDX54-205ENST00000548786 TSPAN6O43657 245 aa15.94■□□□□ 0.14
DDX54-205ENST00000548786 AP1G1O43747 822 aa15.94■□□□□ 0.14
DDX54-205ENST00000548786 SPOPO43791 374 aa15.94■□□□□ 0.14
DDX54-205ENST00000548786 MTA2O94776 668 aa15.94■□□□□ 0.14
DDX54-205ENST00000548786 THEGLP0DJG4 465 aa15.94■□□□□ 0.14
DDX54-205ENST00000548786 COMTP21964 271 aa15.94■□□□□ 0.14
DDX54-205ENST00000548786 CYLC1P35663 651 aaPredicted RBP15.94■□□□□ 0.14
DDX54-205ENST00000548786 NUDT1P36639 197 aa15.94■□□□□ 0.14
DDX54-205ENST00000548786 ARHGAP25P42331 645 aa15.94■□□□□ 0.14
DDX54-205ENST00000548786 GBE1Q04446 702 aa15.94■□□□□ 0.14
DDX54-205ENST00000548786 FOXC1Q12948 553 aa15.94■□□□□ 0.14
DDX54-205ENST00000548786 SGCGQ13326 291 aa15.94■□□□□ 0.14
DDX54-205ENST00000548786 SLC14A1Q13336 389 aa15.94■□□□□ 0.14
DDX54-205ENST00000548786 PDK2Q15119 407 aa15.94■□□□□ 0.14
DDX54-205ENST00000548786 ZNF423Q2M1K9 1284 aa15.94■□□□□ 0.14
DDX54-205ENST00000548786 GCNT7Q6ZNI0 430 aa15.94■□□□□ 0.14
DDX54-205ENST00000548786 MAP7D3Q8IWC1 876 aa15.94■□□□□ 0.14
DDX54-205ENST00000548786 PGBD5Q8N414 524 aa15.94■□□□□ 0.14
DDX54-205ENST00000548786 PQLC3Q8N755 202 aa15.94■□□□□ 0.14
DDX54-205ENST00000548786 MFSD2AQ8NA29 543 aa15.94■□□□□ 0.14
DDX54-205ENST00000548786 TMEM145Q8NBT3 493 aa15.94■□□□□ 0.14
DDX54-205ENST00000548786 OR13H1Q8NG92 308 aa15.94■□□□□ 0.14
DDX54-205ENST00000548786 RAB7BQ96AH8 199 aa15.94■□□□□ 0.14
DDX54-205ENST00000548786 KLHDC7BQ96G42 594 aa15.94■□□□□ 0.14
DDX54-205ENST00000548786 NSMCE3Q96MG7 304 aa15.94■□□□□ 0.14
DDX54-205ENST00000548786 PANX2Q96RD6 677 aa15.94■□□□□ 0.14
DDX54-205ENST00000548786 ELF4Q99607 663 aaPredicted RBP15.94■□□□□ 0.14
DDX54-205ENST00000548786 ZNF670Q9BS34 389 aa15.94■□□□□ 0.14
DDX54-205ENST00000548786 CPEB1Q9BZB8 566 aaKnown RBP15.94■□□□□ 0.14
DDX54-205ENST00000548786 SUV39H2Q9H5I1 410 aa15.94■□□□□ 0.14
DDX54-205ENST00000548786 ATP13A3Q9H7F0 1226 aa15.94■□□□□ 0.14
DDX54-205ENST00000548786 INTUQ9ULD6 942 aa15.94■□□□□ 0.14
DDX54-205ENST00000548786 COQ6Q9Y2Z9 468 aa15.94■□□□□ 0.14
DDX54-205ENST00000548786 GOLGA8CPA6NN73 597 aa15.93■□□□□ 0.14
DDX54-205ENST00000548786 UPK3BL1B0FP48 263 aa15.93■□□□□ 0.14
DDX54-205ENST00000548786 UPK3BL2E5RIL1 263 aa15.93■□□□□ 0.14
DDX54-205ENST00000548786 AREL1O15033 823 aa15.93■□□□□ 0.14
DDX54-205ENST00000548786 SDC3O75056 442 aa15.93■□□□□ 0.14
DDX54-205ENST00000548786 TOP3BO95985 862 aaKnown RBP15.93■□□□□ 0.14
DDX54-205ENST00000548786 PEX11BO96011 259 aa15.93■□□□□ 0.14
DDX54-205ENST00000548786 SPINK2P20155 84 aa15.93■□□□□ 0.14
DDX54-205ENST00000548786 KDELR1P24390 212 aa15.93■□□□□ 0.14
DDX54-205ENST00000548786 SERPINA4P29622 427 aa15.93■□□□□ 0.14
DDX54-205ENST00000548786 MMP13P45452 471 aa15.93■□□□□ 0.14
DDX54-205ENST00000548786 DYNLT1P63172 113 aa15.93■□□□□ 0.14
DDX54-205ENST00000548786 BCL2L1Q07817 233 aa15.93■□□□□ 0.14
DDX54-205ENST00000548786 RFTN1Q14699 578 aaPredicted RBP15.93■□□□□ 0.14
DDX54-205ENST00000548786 LLGL1Q15334 1064 aa15.93■□□□□ 0.14
DDX54-205ENST00000548786 FAM182AQ5T1J6 154 aa15.93■□□□□ 0.14
DDX54-205ENST00000548786 CCDC170Q8IYT3 715 aa15.93■□□□□ 0.14
DDX54-205ENST00000548786 CXorf40AQ8TE69 158 aa15.93■□□□□ 0.14
DDX54-205ENST00000548786 RHBDD1Q8TEB9 315 aa15.93■□□□□ 0.14
DDX54-205ENST00000548786 PDCD6IPQ8WUM4 868 aaKnown RBP15.93■□□□□ 0.14
DDX54-205ENST00000548786 NSMCE1Q8WV22 266 aa15.93■□□□□ 0.14
DDX54-205ENST00000548786 RNF25Q96BH1 459 aaPredicted RBP15.93■□□□□ 0.14
DDX54-205ENST00000548786 ZNF599Q96NL3 588 aa15.93■□□□□ 0.14
DDX54-205ENST00000548786 PSKH2Q96QS6 385 aa15.93■□□□□ 0.14
DDX54-205ENST00000548786 NT5MQ9NPB1 228 aa15.93■□□□□ 0.14
DDX54-205ENST00000548786 PCDH12Q9NPG4 1184 aa15.93■□□□□ 0.14
DDX54-205ENST00000548786 SCUBE2Q9NQ36 999 aa15.93■□□□□ 0.14
DDX54-205ENST00000548786 DKK3Q9UBP4 350 aa15.93■□□□□ 0.14
DDX54-205ENST00000548786 PCOLCE2Q9UKZ9 415 aa15.93■□□□□ 0.14
DDX54-205ENST00000548786 TTLL3Q9Y4R7 772 aa15.93■□□□□ 0.14
DDX54-205ENST00000548786 ANKRD36A6QL64 1941 aa15.93■□□□□ 0.14
DDX54-205ENST00000548786 CEP295Q9C0D2 2601 aa15.93■□□□□ 0.14
DDX54-205ENST00000548786 A0A1B0GTQ1 180 aa15.92■□□□□ 0.14
DDX54-205ENST00000548786 POM121BA6NF01 834 aa15.92■□□□□ 0.14
DDX54-205ENST00000548786 A8MX80 341 aa15.92■□□□□ 0.14
DDX54-205ENST00000548786 ZNF883P0CG24 379 aa15.92■□□□□ 0.14
DDX54-205ENST00000548786 GARSP41250 739 aaKnown RBP15.92■□□□□ 0.14
DDX54-205ENST00000548786 RENBPP51606 427 aa15.92■□□□□ 0.14
DDX54-205ENST00000548786 ITKQ08881 620 aa15.92■□□□□ 0.14
DDX54-205ENST00000548786 BNIP3Q12983 259 aa15.92■□□□□ 0.14
DDX54-205ENST00000548786 PAFAH1B3Q15102 231 aaKnown RBP15.92■□□□□ 0.14
DDX54-205ENST00000548786 SHBQ15464 509 aa15.92■□□□□ 0.14
DDX54-205ENST00000548786 TRIP6Q15654 476 aaKnown RBP15.92■□□□□ 0.14
DDX54-205ENST00000548786 UGP2Q16851 508 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms