RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 FZD3Q9NPG1 666 aa11.53□□□□□ -0.56
BEST3-209ENST00000548658 EVA1BQ9NVM1 165 aa11.53□□□□□ -0.56
BEST3-209ENST00000548658 GPATCH2LQ9NWQ4 482 aa11.53□□□□□ -0.56
BEST3-209ENST00000548658 IP6K2Q9UHH9 426 aa11.53□□□□□ -0.56
BEST3-209ENST00000548658 IPO11Q9UI26 975 aaKnown RBP11.53□□□□□ -0.56
BEST3-209ENST00000548658 CA5BQ9Y2D0 317 aa11.53□□□□□ -0.56
BEST3-209ENST00000548658 TP53BP1Q12888 1972 aaPredicted RBP11.52□□□□□ -0.56
BEST3-209ENST00000548658 CEP295Q9C0D2 2601 aa11.52□□□□□ -0.57
BEST3-209ENST00000548658 SPTY2D1-AS1A0A0U1RR47 76 aa11.52□□□□□ -0.57
BEST3-209ENST00000548658 H3BM21 787 aa11.52□□□□□ -0.57
BEST3-209ENST00000548658 MYO1FO00160 1098 aa11.52□□□□□ -0.57
BEST3-209ENST00000548658 RFPL3O75679 317 aa11.52□□□□□ -0.57
BEST3-209ENST00000548658 TM7SF2O76062 418 aa11.52□□□□□ -0.57
BEST3-209ENST00000548658 DGKAP23743 735 aa11.52□□□□□ -0.57
BEST3-209ENST00000548658 ABL2P42684 1182 aa11.52□□□□□ -0.57
BEST3-209ENST00000548658 PAPOLAP51003 745 aaKnown RBP11.52□□□□□ -0.57
BEST3-209ENST00000548658 RENBPP51606 427 aa11.52□□□□□ -0.57
BEST3-209ENST00000548658 CLDN2P57739 230 aa11.52□□□□□ -0.57
BEST3-209ENST00000548658 YPEL5P62699 121 aa11.52□□□□□ -0.57
BEST3-209ENST00000548658 POLR2LP62875 67 aaKnown RBP11.52□□□□□ -0.57
BEST3-209ENST00000548658 E2F1Q01094 437 aa11.52□□□□□ -0.57
BEST3-209ENST00000548658 IL10RBQ08334 325 aa11.52□□□□□ -0.57
BEST3-209ENST00000548658 NFKBIBQ15653 356 aa11.52□□□□□ -0.57
BEST3-209ENST00000548658 DPYSL2Q16555 572 aa11.52□□□□□ -0.57
BEST3-209ENST00000548658 CA9Q16790 459 aa11.52□□□□□ -0.57
BEST3-209ENST00000548658 UGP2Q16851 508 aa11.52□□□□□ -0.57
BEST3-209ENST00000548658 CCDC157Q569K6 752 aa11.52□□□□□ -0.57
BEST3-209ENST00000548658 AFMIDQ63HM1 303 aa11.52□□□□□ -0.57
BEST3-209ENST00000548658 ALKBH5Q6P6C2 394 aaKnown RBP11.52□□□□□ -0.57
BEST3-209ENST00000548658 GCNT7Q6ZNI0 430 aa11.52□□□□□ -0.57
BEST3-209ENST00000548658 KANSL1Q7Z3B3 1105 aa11.52□□□□□ -0.57
BEST3-209ENST00000548658 PTAR1Q7Z6K3 402 aaPredicted RBP11.52□□□□□ -0.57
BEST3-209ENST00000548658 PARGQ86W56 976 aa11.52□□□□□ -0.57
BEST3-209ENST00000548658 NIPA2Q8N8Q9 360 aa11.52□□□□□ -0.57
BEST3-209ENST00000548658 CXorf40AQ8TE69 158 aa11.52□□□□□ -0.57
BEST3-209ENST00000548658 TSC1Q92574 1164 aa11.52□□□□□ -0.57
BEST3-209ENST00000548658 CELF6Q96J87 481 aaKnown RBP11.52□□□□□ -0.57
BEST3-209ENST00000548658 ZNF599Q96NL3 588 aa11.52□□□□□ -0.57
BEST3-209ENST00000548658 PEBP4Q96S96 227 aa11.52□□□□□ -0.57
BEST3-209ENST00000548658 DUSP23Q9BVJ7 150 aa11.52□□□□□ -0.57
BEST3-209ENST00000548658 KLC2Q9H0B6 622 aa11.52□□□□□ -0.57
BEST3-209ENST00000548658 CCDC86Q9H6F5 360 aaKnown RBP11.52□□□□□ -0.57
BEST3-209ENST00000548658 SP110Q9HB58 689 aa11.52□□□□□ -0.57
BEST3-209ENST00000548658 PDFQ9HBH1 243 aa11.52□□□□□ -0.57
BEST3-209ENST00000548658 GPR27Q9NS67 375 aa11.52□□□□□ -0.57
BEST3-209ENST00000548658 CWC15Q9P013 229 aaKnown RBP11.52□□□□□ -0.57
BEST3-209ENST00000548658 IFNKQ9P0W0 207 aa11.52□□□□□ -0.57
BEST3-209ENST00000548658 LCMT1Q9UIC8 334 aa11.52□□□□□ -0.57
BEST3-209ENST00000548658 KNTC1P50748 2209 aa11.52□□□□□ -0.57
BEST3-209ENST00000548658 POM121BA6NF01 834 aa11.51□□□□□ -0.57
BEST3-209ENST00000548658 J3KR12 359 aa11.51□□□□□ -0.57
BEST3-209ENST00000548658 CBFA2T2O43439 604 aa11.51□□□□□ -0.57
BEST3-209ENST00000548658 SDC3O75056 442 aa11.51□□□□□ -0.57
BEST3-209ENST00000548658 KRT37O76014 449 aa11.51□□□□□ -0.57
BEST3-209ENST00000548658 JUPP14923 745 aa11.51□□□□□ -0.57
BEST3-209ENST00000548658 TIMP2P16035 220 aa11.51□□□□□ -0.57
BEST3-209ENST00000548658 ACP1P24666 158 aa11.51□□□□□ -0.57
BEST3-209ENST00000548658 SERPINA4P29622 427 aa11.51□□□□□ -0.57
BEST3-209ENST00000548658 SERPINB6P35237 376 aa11.51□□□□□ -0.57
BEST3-209ENST00000548658 ACADVLP49748 655 aa11.51□□□□□ -0.57
BEST3-209ENST00000548658 THOP1P52888 689 aa11.51□□□□□ -0.57
BEST3-209ENST00000548658 FGL2Q14314 439 aa11.51□□□□□ -0.57
BEST3-209ENST00000548658 TSR1Q2NL82 804 aaKnown RBP11.51□□□□□ -0.57
BEST3-209ENST00000548658 ERAP2Q6P179 960 aa11.51□□□□□ -0.57
BEST3-209ENST00000548658 TMCO3Q6UWJ1 677 aa11.51□□□□□ -0.57
BEST3-209ENST00000548658 DHRS13Q6UX07 377 aa11.51□□□□□ -0.57
BEST3-209ENST00000548658 CYP4V2Q6ZWL3 525 aaPredicted RBP11.51□□□□□ -0.57
BEST3-209ENST00000548658 SLC22A18ASQ8N1D0 253 aa11.51□□□□□ -0.57
BEST3-209ENST00000548658 BBS5Q8N3I7 341 aa11.51□□□□□ -0.57
BEST3-209ENST00000548658 SLC25A45Q8N413 288 aa11.51□□□□□ -0.57
BEST3-209ENST00000548658 OR4C6Q8NH72 309 aa11.51□□□□□ -0.57
BEST3-209ENST00000548658 BTN2A2Q8WVV5 523 aa11.51□□□□□ -0.57
BEST3-209ENST00000548658 TEKT4Q8WW24 435 aa11.51□□□□□ -0.57
BEST3-209ENST00000548658 VOPP1Q96AW1 172 aa11.51□□□□□ -0.57
BEST3-209ENST00000548658 CENPTQ96BT3 561 aa11.51□□□□□ -0.57
BEST3-209ENST00000548658 KCTD15Q96SI1 283 aaPredicted RBP11.51□□□□□ -0.57
BEST3-209ENST00000548658 KLF6Q99612 283 aaPredicted RBP11.51□□□□□ -0.57
BEST3-209ENST00000548658 CINPQ9BW66 212 aaPredicted RBP11.51□□□□□ -0.57
BEST3-209ENST00000548658 TRIM7Q9C029 511 aa11.51□□□□□ -0.57
BEST3-209ENST00000548658 THAP2Q9H0W7 228 aa11.51□□□□□ -0.57
BEST3-209ENST00000548658 ATP13A3Q9H7F0 1226 aa11.51□□□□□ -0.57
BEST3-209ENST00000548658 USP29Q9HBJ7 922 aa11.51□□□□□ -0.57
BEST3-209ENST00000548658 DNAJC28Q9NX36 388 aa11.51□□□□□ -0.57
BEST3-209ENST00000548658 NLGN3Q9NZ94 848 aa11.51□□□□□ -0.57
BEST3-209ENST00000548658 NCKIPSDQ9NZQ3 722 aa11.51□□□□□ -0.57
BEST3-209ENST00000548658 LHX3Q9UBR4 397 aa11.51□□□□□ -0.57
BEST3-209ENST00000548658 DKK4Q9UBT3 224 aa11.51□□□□□ -0.57
BEST3-209ENST00000548658 ANAPC7Q9UJX3 599 aa11.51□□□□□ -0.57
BEST3-209ENST00000548658 CSNK1G3Q9Y6M4 447 aa11.51□□□□□ -0.57
BEST3-209ENST00000548658 A0A087X0T9 212 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 A0A1W2PQ67 120 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 TSPAN11A1L157 253 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 CFAP69A5D8W1 941 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 TMEM110-MUSTN1A8MSY1 372 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 DFFAO00273 331 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 SCAMP1O15126 338 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 RAD51BO15315 384 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 SIGLEC6O43699 453 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 PIAS2O75928 621 aa11.5□□□□□ -0.57
BEST3-209ENST00000548658 CSF2P04141 144 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms