RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 DPY19L3Q6ZPD9 716 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 RAPH1Q70E73 1250 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 MRPL10Q7Z7H8 261 aaKnown RBP4.47□□□□□ -1.69
SCAF11-210ENST00000547654 CAND1Q86VP6 1230 aaKnown RBP4.47□□□□□ -1.69
SCAF11-210ENST00000547654 SCN4BQ8IWT1 228 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 CCDC170Q8IYT3 715 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 CCAR2Q8N163 923 aaKnown RBP4.47□□□□□ -1.69
SCAF11-210ENST00000547654 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.47□□□□□ -1.69
SCAF11-210ENST00000547654 POC5Q8NA72 575 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 POGLUT1Q8NBL1 392 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 TMEM116Q8NCL8 245 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.47□□□□□ -1.69
SCAF11-210ENST00000547654 KCNJ9Q92806 393 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 CCDC47Q96A33 483 aaKnown RBP4.47□□□□□ -1.69
SCAF11-210ENST00000547654 VPS33AQ96AX1 596 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 ZNF845Q96IR2 970 aaPredicted RBP4.47□□□□□ -1.69
SCAF11-210ENST00000547654 KLHL15Q96M94 604 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 SNX18Q96RF0 628 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 DESI2Q9BSY9 194 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 C2orf40Q9H1Z8 148 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 TLR8Q9NR97 1041 aaKnown RBP4.47□□□□□ -1.69
SCAF11-210ENST00000547654 GIMAP4Q9NUV9 329 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 MTMR4Q9NYA4 1195 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 IL1RAPL1Q9NZN1 696 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 MARCH4Q9P2E8 410 aaPredicted RBP4.47□□□□□ -1.69
SCAF11-210ENST00000547654 SUCLA2Q9P2R7 463 aaPredicted RBP4.47□□□□□ -1.69
SCAF11-210ENST00000547654 SESN1Q9Y6P5 492 aa4.47□□□□□ -1.69
SCAF11-210ENST00000547654 PPRC1Q5VV67 1664 aaKnown RBP4.47□□□□□ -1.69
SCAF11-210ENST00000547654 FLT1P17948 1338 aa4.46□□□□□ -1.69
SCAF11-210ENST00000547654 WDR17Q8IZU2 1322 aa4.46□□□□□ -1.69
SCAF11-210ENST00000547654 IFT140Q96RY7 1462 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 A8MVJ9 347 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 KCNJ18B7U540 433 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 E5RJQ4 531 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 CTDSP2O14595 271 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 RB1P06400 928 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 ATP5BP06576 529 aaKnown RBP4.46□□□□□ -1.7
SCAF11-210ENST00000547654 CYP3A4P08684 503 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 MYBL1P10243 752 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 PEPDP12955 493 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 NRIP1P48552 1158 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 MMP14P50281 582 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 RPS6KA3P51812 740 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 ZNF41P51814 821 aaPredicted RBP4.46□□□□□ -1.7
SCAF11-210ENST00000547654 PPP5CP53041 499 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 PDE1AP54750 535 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 RRP1P56182 461 aaKnown RBP4.46□□□□□ -1.7
SCAF11-210ENST00000547654 PSMC6P62333 389 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 ARHGAP8P85298 464 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 ALKBH1Q13686 389 aaKnown RBP4.46□□□□□ -1.7
SCAF11-210ENST00000547654 TNFAIP1Q13829 316 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 KCNJ12Q14500 433 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 GXYLT1Q4G148 440 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 TMEM81Q6P7N7 255 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 SHQ1Q6PI26 577 aaKnown RBP4.46□□□□□ -1.7
SCAF11-210ENST00000547654 SHC4Q6S5L8 630 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 PET117Q6UWS5 81 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 KIAA1324Q6UXG2 1013 aaKnown RBP4.46□□□□□ -1.7
SCAF11-210ENST00000547654 TICAM1Q8IUC6 712 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 TMCO5AQ8N6Q1 288 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 APPL2Q8NEU8 664 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 CADM4Q8NFZ8 388 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 PIGOQ8TEQ8 1089 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 CLEC4CQ8WTT0 213 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 NSMCE1Q8WV22 266 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 PRPF31Q8WWY3 499 aaKnown RBP4.46□□□□□ -1.7
SCAF11-210ENST00000547654 RAB40AQ8WXH6 277 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 DAZAP1Q96EP5 407 aaKnown RBP4.46□□□□□ -1.7
SCAF11-210ENST00000547654 SAT2Q96F10 170 aaPredicted RBP4.46□□□□□ -1.7
SCAF11-210ENST00000547654 PGAP3Q96FM1 320 aaPredicted RBP4.46□□□□□ -1.7
SCAF11-210ENST00000547654 CCDC34Q96HJ3 373 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.46□□□□□ -1.7
SCAF11-210ENST00000547654 NPLQ9BXD5 320 aaPredicted RBP4.46□□□□□ -1.7
SCAF11-210ENST00000547654 KLHL4Q9C0H6 718 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 PFDN4Q9NQP4 134 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 RRP7BPQ9NSQ0 103 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 SEMA5BQ9P283 1151 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 KLHL13Q9P2N7 655 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 SLC25A13Q9UJS0 675 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 PPIEQ9UNP9 301 aaKnown RBP4.46□□□□□ -1.7
SCAF11-210ENST00000547654 LRP12Q9Y561 859 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 COPG1Q9Y678 874 aaKnown RBP4.46□□□□□ -1.7
SCAF11-210ENST00000547654 SRCAPQ6ZRS2 3230 aa4.46□□□□□ -1.7
SCAF11-210ENST00000547654 SYNJ1O43426 1573 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 FRMD3A2A2Y4 597 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 GLOD5A6NK44 160 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 A8MXE2 369 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 PI4K2BG5E9Z4 385 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 TBX10O75333 385 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 PMPCBO75439 489 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 BCAR3O75815 825 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 CYP4B1P13584 511 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 STMN1P16949 149 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 ATP5F1P24539 256 aaPredicted RBP4.45□□□□□ -1.7
SCAF11-210ENST00000547654 GKP32189 559 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 HNF1BP35680 557 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 CPOXP36551 454 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 IGHMBP2P38935 993 aaKnown RBP4.45□□□□□ -1.7
SCAF11-210ENST00000547654 HNF4AP41235 474 aa4.45□□□□□ -1.7
SCAF11-210ENST00000547654 SLC15A1P46059 708 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms