RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 NETO2Q8NC67 525 aa16.08■□□□□ 0.16
DDX54-204ENST00000546898 KCTD6Q8NC69 237 aa16.08■□□□□ 0.16
DDX54-204ENST00000546898 TSEN2Q8NCE0 465 aaKnown RBP16.08■□□□□ 0.16
DDX54-204ENST00000546898 ASB12Q8WXK4 309 aa16.08■□□□□ 0.16
DDX54-204ENST00000546898 PSKH2Q96QS6 385 aa16.08■□□□□ 0.16
DDX54-204ENST00000546898 CALN1Q9BXU9 219 aa16.08■□□□□ 0.16
DDX54-204ENST00000546898 SLC17A9Q9BYT1 436 aa16.08■□□□□ 0.16
DDX54-204ENST00000546898 SUV39H2Q9H5I1 410 aa16.08■□□□□ 0.16
DDX54-204ENST00000546898 ATP13A3Q9H7F0 1226 aa16.08■□□□□ 0.16
DDX54-204ENST00000546898 PCOLCE2Q9UKZ9 415 aa16.08■□□□□ 0.16
DDX54-204ENST00000546898 PCDHB9Q9Y5E1 797 aa16.08■□□□□ 0.16
DDX54-204ENST00000546898 TMEM110-MUSTN1A8MSY1 372 aa16.07■□□□□ 0.16
DDX54-204ENST00000546898 INSIG1O15503 277 aa16.07■□□□□ 0.16
DDX54-204ENST00000546898 SPINT1O43278 529 aa16.07■□□□□ 0.16
DDX54-204ENST00000546898 MAFKO60675 156 aa16.07■□□□□ 0.16
DDX54-204ENST00000546898 PIGNO95427 931 aa16.07■□□□□ 0.16
DDX54-204ENST00000546898 LCA5LO95447 670 aa16.07■□□□□ 0.16
DDX54-204ENST00000546898 SERPINA4P29622 427 aa16.07■□□□□ 0.16
DDX54-204ENST00000546898 ARRB1P49407 418 aaPredicted RBP16.07■□□□□ 0.16
DDX54-204ENST00000546898 AP1S1P61966 158 aa16.07■□□□□ 0.16
DDX54-204ENST00000546898 ELP6Q0PNE2 266 aa16.07■□□□□ 0.16
DDX54-204ENST00000546898 ZNF235Q14590 738 aa16.07■□□□□ 0.16
DDX54-204ENST00000546898 PAFAH1B3Q15102 231 aaKnown RBP16.07■□□□□ 0.16
DDX54-204ENST00000546898 ATP13A4Q4VNC1 1196 aa16.07■□□□□ 0.16
DDX54-204ENST00000546898 CFAP58Q5T655 872 aa16.07■□□□□ 0.16
DDX54-204ENST00000546898 BRAT1Q6PJG6 821 aa16.07■□□□□ 0.16
DDX54-204ENST00000546898 SRLQ86TD4 932 aa16.07■□□□□ 0.16
DDX54-204ENST00000546898 TTC7BQ86TV6 843 aa16.07■□□□□ 0.16
DDX54-204ENST00000546898 GAS2L3Q86XJ1 694 aa16.07■□□□□ 0.16
DDX54-204ENST00000546898 VSIG1Q86XK7 387 aa16.07■□□□□ 0.16
DDX54-204ENST00000546898 TP53INP2Q8IXH6 220 aa16.07■□□□□ 0.16
DDX54-204ENST00000546898 DENND6BQ8NEG7 585 aa16.07■□□□□ 0.16
DDX54-204ENST00000546898 NSMCE1Q8WV22 266 aa16.07■□□□□ 0.16
DDX54-204ENST00000546898 KLK6Q92876 244 aa16.07■□□□□ 0.16
DDX54-204ENST00000546898 FAF2Q96CS3 445 aa16.07■□□□□ 0.16
DDX54-204ENST00000546898 KLHDC7BQ96G42 594 aa16.07■□□□□ 0.16
DDX54-204ENST00000546898 PANX2Q96RD6 677 aa16.07■□□□□ 0.16
DDX54-204ENST00000546898 C1QTNF2Q9BXJ5 285 aa16.07■□□□□ 0.16
DDX54-204ENST00000546898 LUC7LQ9NQ29 371 aaKnown RBP16.07■□□□□ 0.16
DDX54-204ENST00000546898 HS3ST3A1Q9Y663 406 aa16.07■□□□□ 0.16
DDX54-204ENST00000546898 ZNF487B1APH4 448 aa16.06■□□□□ 0.16
DDX54-204ENST00000546898 MFSD11O43934 449 aa16.06■□□□□ 0.16
DDX54-204ENST00000546898 CBFA2T3O75081 653 aa16.06■□□□□ 0.16
DDX54-204ENST00000546898 THEGLP0DJG4 465 aa16.06■□□□□ 0.16
DDX54-204ENST00000546898 XPAP23025 273 aaPredicted RBP16.06■□□□□ 0.16
DDX54-204ENST00000546898 CYLC1P35663 651 aaPredicted RBP16.06■□□□□ 0.16
DDX54-204ENST00000546898 SLC1A1P43005 524 aa16.06■□□□□ 0.16
DDX54-204ENST00000546898 GRK6P43250 576 aa16.06■□□□□ 0.16
DDX54-204ENST00000546898 RGRP47804 291 aa16.06■□□□□ 0.16
DDX54-204ENST00000546898 HADHBP55084 474 aaKnown RBP16.06■□□□□ 0.16
DDX54-204ENST00000546898 SIM1P81133 766 aaPredicted RBP16.06■□□□□ 0.16
DDX54-204ENST00000546898 SLC10A7Q0GE19 358 aa16.06■□□□□ 0.16
DDX54-204ENST00000546898 MMRN1Q13201 1228 aa16.06■□□□□ 0.16
DDX54-204ENST00000546898 ANKRD20A8PQ5CZ79 823 aa16.06■□□□□ 0.16
DDX54-204ENST00000546898 NCBP2-AS2Q69YL0 99 aa16.06■□□□□ 0.16
DDX54-204ENST00000546898 KYAT3Q6YP21 454 aaKnown RBP16.06■□□□□ 0.16
DDX54-204ENST00000546898 GCNT7Q6ZNI0 430 aa16.06■□□□□ 0.16
DDX54-204ENST00000546898 ABI3BPQ7Z7G0 1075 aa16.06■□□□□ 0.16
DDX54-204ENST00000546898 PCDH19Q8TAB3 1148 aa16.06■□□□□ 0.16
DDX54-204ENST00000546898 BAHD1Q8TBE0 780 aaPredicted RBP16.06■□□□□ 0.16
DDX54-204ENST00000546898 SETD7Q8WTS6 366 aaKnown RBP16.06■□□□□ 0.16
DDX54-204ENST00000546898 LENG8Q96PV6 779 aaPredicted RBP16.06■□□□□ 0.16
DDX54-204ENST00000546898 MYOCQ99972 504 aa16.06■□□□□ 0.16
DDX54-204ENST00000546898 FZD3Q9NPG1 666 aa16.06■□□□□ 0.16
DDX54-204ENST00000546898 ITM2BQ9Y287 266 aa16.06■□□□□ 0.16
DDX54-204ENST00000546898 CEP295Q9C0D2 2601 aa16.06■□□□□ 0.16
DDX54-204ENST00000546898 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.05■□□□□ 0.16
DDX54-204ENST00000546898 A6NNZ2 444 aa16.05■□□□□ 0.16
DDX54-204ENST00000546898 KCNK3O14649 394 aa16.05■□□□□ 0.16
DDX54-204ENST00000546898 PEX11BO96011 259 aa16.05■□□□□ 0.16
DDX54-204ENST00000546898 TIMP2P16035 220 aa16.05■□□□□ 0.16
DDX54-204ENST00000546898 FECHP22830 423 aa16.05■□□□□ 0.16
DDX54-204ENST00000546898 KDELR1P24390 212 aa16.05■□□□□ 0.16
DDX54-204ENST00000546898 EPHA8P29322 1005 aaPredicted RBP16.05■□□□□ 0.16
DDX54-204ENST00000546898 MAGEA1P43355 309 aa16.05■□□□□ 0.16
DDX54-204ENST00000546898 RXRGP48443 463 aa16.05■□□□□ 0.16
DDX54-204ENST00000546898 BCL2L1Q07817 233 aa16.05■□□□□ 0.16
DDX54-204ENST00000546898 GALNT2Q10471 571 aa16.05■□□□□ 0.16
DDX54-204ENST00000546898 SGCGQ13326 291 aa16.05■□□□□ 0.16
DDX54-204ENST00000546898 FGL2Q14314 439 aa16.05■□□□□ 0.16
DDX54-204ENST00000546898 TRIP6Q15654 476 aaKnown RBP16.05■□□□□ 0.16
DDX54-204ENST00000546898 UGP2Q16851 508 aa16.05■□□□□ 0.16
DDX54-204ENST00000546898 RALGPS1Q5JS13 557 aa16.05■□□□□ 0.16
DDX54-204ENST00000546898 ZFYVE27Q5T4F4 411 aa16.05■□□□□ 0.16
DDX54-204ENST00000546898 LRRC38Q5VT99 294 aa16.05■□□□□ 0.16
DDX54-204ENST00000546898 ERAP2Q6P179 960 aa16.05■□□□□ 0.16
DDX54-204ENST00000546898 GLRX5Q86SX6 157 aa16.05■□□□□ 0.16
DDX54-204ENST00000546898 SPATS2Q86XZ4 545 aaKnown RBP16.05■□□□□ 0.16
DDX54-204ENST00000546898 DCP2Q8IU60 420 aaKnown RBP16.05■□□□□ 0.16
DDX54-204ENST00000546898 CXorf40AQ8TE69 158 aa16.05■□□□□ 0.16
DDX54-204ENST00000546898 CAMK1GQ96NX5 476 aa16.05■□□□□ 0.16
DDX54-204ENST00000546898 CDC6Q99741 560 aa16.05■□□□□ 0.16
DDX54-204ENST00000546898 KLHL11Q9NVR0 708 aa16.05■□□□□ 0.16
DDX54-204ENST00000546898 GGT7Q9UJ14 662 aa16.05■□□□□ 0.16
DDX54-204ENST00000546898 ANGPTL2Q9UKU9 493 aa16.05■□□□□ 0.16
DDX54-204ENST00000546898 CA5BQ9Y2D0 317 aa16.05■□□□□ 0.16
DDX54-204ENST00000546898 TDRD6O60522 2096 aaKnown RBP16.05■□□□□ 0.16
DDX54-204ENST00000546898 ACACBO00763 2458 aa16.04■□□□□ 0.16
DDX54-204ENST00000546898 TPRP12270 2363 aaKnown RBP16.04■□□□□ 0.16
DDX54-204ENST00000546898 SPAARA0A1B0GVQ0 90 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms