RNA–Protein interactions for RNA: ENST00000546102.1

CUL3-215, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-215ENST00000546102 STX8Q9UNK0 236 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 ZFR2Q9UPR6 939 aaKnown RBP3.7□□□□□ -1.82
CUL3-215ENST00000546102 PCDHGB5Q9Y5G0 923 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 ENTPD2Q9Y5L3 495 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 DDX49Q9Y6V7 483 aaKnown RBP3.7□□□□□ -1.82
CUL3-215ENST00000546102 GREB1LQ9C091 1923 aaPredicted RBP3.7□□□□□ -1.82
CUL3-215ENST00000546102 SIPA1L1O43166 1804 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 ELP1O95163 1332 aa3.7□□□□□ -1.82
CUL3-215ENST00000546102 TBC1D3DA0A087WVF3 549 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 TBC1D3IA0A087WXS9 549 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 TBC1D3EA0A087X179 549 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 TBC1D3KA0A087X1G2 549 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 A0A1W2PQ09 198 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 TBC1D3BA6NDS4 549 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 TBC1D3FA6NER0 549 aaPredicted RBP3.69□□□□□ -1.82
CUL3-215ENST00000546102 MBD3L5A6NJ08 208 aaPredicted RBP3.69□□□□□ -1.82
CUL3-215ENST00000546102 FAM90A7PA6NKC0 464 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 SMTNL1A8MU46 457 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 A8MV72 311 aaPredicted RBP3.69□□□□□ -1.82
CUL3-215ENST00000546102 FAM90A22PA8MWA6 464 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 FAM90A12PA8MX19 464 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 FAM90A23PA8MXZ1 464 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 TBC1D3LB9A6J9 549 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 TMEM232C9JQI7 657 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 M0QZQ0 153 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 MPHOSPH10O00566 681 aaKnown RBP3.69□□□□□ -1.82
CUL3-215ENST00000546102 UBE2CO00762 179 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 VNN1O95497 513 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 TTLL1O95922 423 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 TBC1D3HP0C7X1 549 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 RARGP13631 454 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 TNNT1P13805 278 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 CALRP27797 417 aaKnown RBP3.69□□□□□ -1.82
CUL3-215ENST00000546102 PPIFP30405 207 aaKnown RBP3.69□□□□□ -1.82
CUL3-215ENST00000546102 GRK5P34947 590 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 BSGP35613 385 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 PSMB10P40306 273 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 GARSP41250 739 aaKnown RBP3.69□□□□□ -1.82
CUL3-215ENST00000546102 GPD2P43304 727 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 PCP4P48539 62 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 NDUFV1P49821 464 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 RPL15P61313 204 aaKnown RBP3.69□□□□□ -1.82
CUL3-215ENST00000546102 UBE2HP62256 183 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 PPARDQ03181 441 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 GABPAQ06546 454 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 TROAPQ12815 778 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 MTAPQ13126 283 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 RESTQ13127 1097 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 SEMA3BQ13214 749 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 PPP2R5CQ13362 524 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 THOC5Q13769 683 aaKnown RBP3.69□□□□□ -1.82
CUL3-215ENST00000546102 SCARB2Q14108 478 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 ASIC2Q16515 512 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 LY6KQ17RY6 165 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 CERKLQ49MI3 558 aaPredicted RBP3.69□□□□□ -1.82
CUL3-215ENST00000546102 USP39Q53GS9 565 aaKnown RBP3.69□□□□□ -1.82
CUL3-215ENST00000546102 ASPRV1Q53RT3 343 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 ZNF766Q5HY98 468 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 MIIPQ5JXC2 388 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 TBC1D3GQ6DHY5 549 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 TBC1D3CQ6IPX1 549 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 CYP20A1Q6UW02 462 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 KIAA1324Q6UXG2 1013 aaKnown RBP3.69□□□□□ -1.82
CUL3-215ENST00000546102 RNF207Q6ZRF8 634 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 TMEM179Q6ZVK1 233 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 MON1AQ86VX9 555 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 APOBEC3FQ8IUX4 373 aaKnown RBP3.69□□□□□ -1.82
CUL3-215ENST00000546102 TBC1D3Q8IZP1 549 aaPredicted RBP3.69□□□□□ -1.82
CUL3-215ENST00000546102 ABRAQ8N0Z2 381 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 ZNF366Q8N895 744 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 SLC44A5Q8NCS7 719 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 CCDC148Q8NFR7 591 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 RFWD2Q8NHY2 731 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 CCDC12Q8WUD4 166 aaPredicted RBP3.69□□□□□ -1.82
CUL3-215ENST00000546102 FAM151AQ8WW52 585 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 ST8SIA2Q92186 375 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 CHFRQ96EP1 664 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 SAAL1Q96ER3 474 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 RNFT2Q96EX2 444 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 DYNLL2Q96FJ2 89 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 WWC2-AS2Q96NR7 200 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 GNRHR2Q96P88 292 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 CD180Q99467 661 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 C17orf80Q9BSJ5 609 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 DESI2Q9BSY9 194 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 HTATIP2Q9BUP3 242 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 VN1R3Q9BXE9 311 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 MAK16Q9BXY0 300 aaKnown RBP3.69□□□□□ -1.82
CUL3-215ENST00000546102 REXO4Q9GZR2 422 aaKnown RBP3.69□□□□□ -1.82
CUL3-215ENST00000546102 SMARCAD1Q9H4L7 1026 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 SH2D4AQ9H788 454 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 NRDE2Q9H7Z3 1164 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 SYNPO2LQ9H987 977 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 PDE11AQ9HCR9 933 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 PDE7BQ9NP56 450 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 MYOZ2Q9NPC6 264 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 DDX4Q9NQI0 724 aaKnown RBP3.69□□□□□ -1.82
CUL3-215ENST00000546102 KCND2Q9NZV8 630 aa3.69□□□□□ -1.82
CUL3-215ENST00000546102 LIMA1Q9UHB6 759 aaKnown RBP3.69□□□□□ -1.82
CUL3-215ENST00000546102 STEAP1Q9UHE8 339 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms