RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 USP36Q9P275 1121 aaKnown RBP16.45■□□□□ 0.22
LIMS2-217ENST00000545738 BCCIPQ9P287 314 aaKnown RBP eCLIP16.45■□□□□ 0.22
LIMS2-217ENST00000545738 INVSQ9Y283 1065 aa16.45■□□□□ 0.22
LIMS2-217ENST00000545738 MUC6Q6W4X9 2439 aa16.45■□□□□ 0.22
LIMS2-217ENST00000545738 SDK1Q7Z5N4 2213 aa16.45■□□□□ 0.22
LIMS2-217ENST00000545738 CFAP69A5D8W1 941 aa16.45■□□□□ 0.22
LIMS2-217ENST00000545738 HTRA2O43464 458 aaPredicted RBP16.45■□□□□ 0.22
LIMS2-217ENST00000545738 FZD6O60353 706 aa16.45■□□□□ 0.22
LIMS2-217ENST00000545738 PRNPP04156 253 aa16.45■□□□□ 0.22
LIMS2-217ENST00000545738 STIP1P31948 543 aaKnown RBP16.45■□□□□ 0.22
LIMS2-217ENST00000545738 RPL22P35268 128 aaKnown RBP16.45■□□□□ 0.22
LIMS2-217ENST00000545738 PTGIRP43119 386 aa16.45■□□□□ 0.22
LIMS2-217ENST00000545738 TAS2R38P59533 333 aa16.45■□□□□ 0.22
LIMS2-217ENST00000545738 SRSF5Q13243 272 aaKnown RBP16.45■□□□□ 0.22
LIMS2-217ENST00000545738 PIP5KL1Q5T9C9 394 aa16.45■□□□□ 0.22
LIMS2-217ENST00000545738 AGBL4Q5VU57 503 aa16.45■□□□□ 0.22
LIMS2-217ENST00000545738 KDELC1Q6UW63 502 aa16.45■□□□□ 0.22
LIMS2-217ENST00000545738 ZNF572Q7Z3I7 529 aaPredicted RBP16.45■□□□□ 0.22
LIMS2-217ENST00000545738 PGBD3Q8N328 593 aa16.45■□□□□ 0.22
LIMS2-217ENST00000545738 PRCCQ92733 491 aaPredicted RBP16.45■□□□□ 0.22
LIMS2-217ENST00000545738 NELL1Q92832 810 aa16.45■□□□□ 0.22
LIMS2-217ENST00000545738 FAM131CQ96AQ9 280 aa16.45■□□□□ 0.22
LIMS2-217ENST00000545738 FCRL5Q96RD9 977 aa16.45■□□□□ 0.22
LIMS2-217ENST00000545738 TDRD1Q9BXT4 1180 aaKnown RBP16.45■□□□□ 0.22
LIMS2-217ENST00000545738 SUV39H2Q9H5I1 410 aa16.45■□□□□ 0.22
LIMS2-217ENST00000545738 FBRSQ9HAH7 460 aa16.45■□□□□ 0.22
LIMS2-217ENST00000545738 RNF14Q9UBS8 474 aa16.45■□□□□ 0.22
LIMS2-217ENST00000545738 RSPH14Q9UHP6 348 aa16.45■□□□□ 0.22
LIMS2-217ENST00000545738 GGT7Q9UJ14 662 aa16.45■□□□□ 0.22
LIMS2-217ENST00000545738 TRHDEQ9UKU6 1024 aa16.45■□□□□ 0.22
LIMS2-217ENST00000545738 A0A0U1RQS6 177 aa16.44■□□□□ 0.22
LIMS2-217ENST00000545738 OPHN1O60890 802 aa16.44■□□□□ 0.22
LIMS2-217ENST00000545738 NEBLO76041 1014 aa16.44■□□□□ 0.22
LIMS2-217ENST00000545738 HOXA6P31267 233 aa16.44■□□□□ 0.22
LIMS2-217ENST00000545738 P2RY2P41231 377 aa16.44■□□□□ 0.22
LIMS2-217ENST00000545738 ABL2P42684 1182 aa16.44■□□□□ 0.22
LIMS2-217ENST00000545738 PAFAH1B1P43034 410 aa16.44■□□□□ 0.22
LIMS2-217ENST00000545738 FNTAP49354 379 aa16.44■□□□□ 0.22
LIMS2-217ENST00000545738 SEMG2Q02383 582 aa16.44■□□□□ 0.22
LIMS2-217ENST00000545738 P3H1Q32P28 736 aa16.44■□□□□ 0.22
LIMS2-217ENST00000545738 MAP7D1Q3KQU3 841 aa16.44■□□□□ 0.22
LIMS2-217ENST00000545738 ZNF805Q5CZA5 627 aa16.44■□□□□ 0.22
LIMS2-217ENST00000545738 KDELC2Q7Z4H8 507 aa16.44■□□□□ 0.22
LIMS2-217ENST00000545738 KLHDC8BQ8IXV7 354 aa16.44■□□□□ 0.22
LIMS2-217ENST00000545738 ATL2Q8NHH9 583 aa16.44■□□□□ 0.22
LIMS2-217ENST00000545738 MRGPRX2Q96LB1 330 aa16.44■□□□□ 0.22
LIMS2-217ENST00000545738 TUBGCP5Q96RT8 1024 aa16.44■□□□□ 0.22
LIMS2-217ENST00000545738 TRIB3Q96RU7 358 aa16.44■□□□□ 0.22
LIMS2-217ENST00000545738 NEUROG2Q9H2A3 272 aa16.44■□□□□ 0.22
LIMS2-217ENST00000545738 HOMER3Q9NSC5 361 aa16.44■□□□□ 0.22
LIMS2-217ENST00000545738 CYP8B1Q9UNU6 501 aa16.44■□□□□ 0.22
LIMS2-217ENST00000545738 CHKBQ9Y259 395 aa16.44■□□□□ 0.22
LIMS2-217ENST00000545738 ITM2BQ9Y287 266 aa16.44■□□□□ 0.22
LIMS2-217ENST00000545738 FARP1Q9Y4F1 1045 aaPredicted RBP16.44■□□□□ 0.22
LIMS2-217ENST00000545738 RAI2Q9Y5P3 530 aa16.44■□□□□ 0.22
LIMS2-217ENST00000545738 LRRK1Q38SD2 2015 aa16.43■□□□□ 0.22
LIMS2-217ENST00000545738 FANCMQ8IYD8 2048 aa16.43■□□□□ 0.22
LIMS2-217ENST00000545738 GOLGA6L10A0A0M3HER8 536 aa16.43■□□□□ 0.22
LIMS2-217ENST00000545738 TSPAN11A1L157 253 aa16.43■□□□□ 0.22
LIMS2-217ENST00000545738 C16orf96A6NNT2 1141 aa16.43■□□□□ 0.22
LIMS2-217ENST00000545738 GALR2O43603 387 aaPredicted RBP16.43■□□□□ 0.22
LIMS2-217ENST00000545738 PMPCBO75439 489 aa16.43■□□□□ 0.22
LIMS2-217ENST00000545738 ADH1BP00325 375 aa16.43■□□□□ 0.22
LIMS2-217ENST00000545738 SP9P0CG40 484 aa16.43■□□□□ 0.22
LIMS2-217ENST00000545738 C5AR1P21730 350 aa16.43■□□□□ 0.22
LIMS2-217ENST00000545738 ITGB7P26010 798 aa16.43■□□□□ 0.22
LIMS2-217ENST00000545738 ACSL1P33121 698 aa16.43■□□□□ 0.22
LIMS2-217ENST00000545738 BCL2L1Q07817 233 aa16.43■□□□□ 0.22
LIMS2-217ENST00000545738 FAM124AQ86V42 546 aa16.43■□□□□ 0.22
LIMS2-217ENST00000545738 HDDC3Q8N4P3 179 aa16.43■□□□□ 0.22
LIMS2-217ENST00000545738 LRRN4CLQ8ND94 238 aa16.43■□□□□ 0.22
LIMS2-217ENST00000545738 LRIG1Q96JA1 1093 aa16.43■□□□□ 0.22
LIMS2-217ENST00000545738 ATP13A3Q9H7F0 1226 aa16.43■□□□□ 0.22
LIMS2-217ENST00000545738 ITM2CQ9NQX7 267 aa16.43■□□□□ 0.22
LIMS2-217ENST00000545738 FBXL12Q9NXK8 326 aa16.43■□□□□ 0.22
LIMS2-217ENST00000545738 PCYOX1Q9UHG3 505 aa16.43■□□□□ 0.22
LIMS2-217ENST00000545738 MBD1Q9UIS9 605 aaPredicted RBP16.43■□□□□ 0.22
LIMS2-217ENST00000545738 MYLKQ15746 1914 aa16.43■□□□□ 0.22
LIMS2-217ENST00000545738 GON4LQ3T8J9 2241 aa16.43■□□□□ 0.22
LIMS2-217ENST00000545738 C1QTNF3-AMACRE9PGA6 284 aa16.42■□□□□ 0.22
LIMS2-217ENST00000545738 AXIN1O15169 862 aa16.42■□□□□ 0.22
LIMS2-217ENST00000545738 RNASEH1O60930 286 aaKnown RBP16.42■□□□□ 0.22
LIMS2-217ENST00000545738 RNASEH2AO75792 299 aaKnown RBP16.42■□□□□ 0.22
LIMS2-217ENST00000545738 ALDH1A2O94788 518 aa16.42■□□□□ 0.22
LIMS2-217ENST00000545738 IGLV3-19P01714 112 aa16.42■□□□□ 0.22
LIMS2-217ENST00000545738 DNTTP04053 509 aa16.42■□□□□ 0.22
LIMS2-217ENST00000545738 SERPINF2P08697 491 aa16.42■□□□□ 0.22
LIMS2-217ENST00000545738 TIMP2P16035 220 aa16.42■□□□□ 0.22
LIMS2-217ENST00000545738 VPS41P49754 854 aa16.42■□□□□ 0.22
LIMS2-217ENST00000545738 PCSK7Q16549 785 aa16.42■□□□□ 0.22
LIMS2-217ENST00000545738 KCTD11Q693B1 232 aa16.42■□□□□ 0.22
LIMS2-217ENST00000545738 DSG4Q86SJ6 1040 aa16.42■□□□□ 0.22
LIMS2-217ENST00000545738 PDCD6IPQ8WUM4 868 aaKnown RBP16.42■□□□□ 0.22
LIMS2-217ENST00000545738 PIH1D2Q8WWB5 315 aa16.42■□□□□ 0.22
LIMS2-217ENST00000545738 KRT12Q99456 494 aa16.42■□□□□ 0.22
LIMS2-217ENST00000545738 ETNK1Q9HBU6 452 aa16.42■□□□□ 0.22
LIMS2-217ENST00000545738 FBXO4Q9UKT5 387 aa16.42■□□□□ 0.22
LIMS2-217ENST00000545738 PCDHB9Q9Y5E1 797 aa16.42■□□□□ 0.22
LIMS2-217ENST00000545738 IGHV1OR15-9A0A0B4J2B8 117 aa16.42■□□□□ 0.22
LIMS2-217ENST00000545738 SOCS5O75159 536 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms