RNA–Protein interactions for RNA: ENST00000545593.1

AP000462.3-201, humanhuman

TSL 5 BASIC

Gene AP000462.3, Length 330 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000462.3-201ENST00000545593 ERVFC1-1P60608 527 aa3.13□□□□□ -1.91
AP000462.3-201ENST00000545593 SEMA3BQ13214 749 aa3.13□□□□□ -1.91
AP000462.3-201ENST00000545593 HDAC1Q13547 482 aaPredicted RBP3.13□□□□□ -1.91
AP000462.3-201ENST00000545593 SHBQ15464 509 aa3.13□□□□□ -1.91
AP000462.3-201ENST00000545593 SHROOM1Q2M3G4 852 aaPredicted RBP3.13□□□□□ -1.91
AP000462.3-201ENST00000545593 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.13□□□□□ -1.91
AP000462.3-201ENST00000545593 FAM90A2PQ658T7 463 aa3.13□□□□□ -1.91
AP000462.3-201ENST00000545593 ACSM6Q6P461 480 aa3.13□□□□□ -1.91
AP000462.3-201ENST00000545593 FBXO46Q6PJ61 603 aaPredicted RBP3.13□□□□□ -1.91
AP000462.3-201ENST00000545593 ZNF474Q6S9Z5 364 aaPredicted RBP3.13□□□□□ -1.91
AP000462.3-201ENST00000545593 LRIG3Q6UXM1 1119 aa3.13□□□□□ -1.91
AP000462.3-201ENST00000545593 GPSM1Q86YR5 675 aa3.13□□□□□ -1.91
AP000462.3-201ENST00000545593 SDR16C5Q8N3Y7 309 aa3.13□□□□□ -1.91
AP000462.3-201ENST00000545593 KBTBD3Q8NAB2 608 aa3.13□□□□□ -1.91
AP000462.3-201ENST00000545593 OR52L2PQ8NGH6 319 aa3.13□□□□□ -1.91
AP000462.3-201ENST00000545593 ABHD5Q8WTS1 349 aa3.13□□□□□ -1.91
AP000462.3-201ENST00000545593 ASB12Q8WXK4 309 aa3.13□□□□□ -1.91
AP000462.3-201ENST00000545593 APIPQ96GX9 242 aa3.13□□□□□ -1.91
AP000462.3-201ENST00000545593 HES6Q96HZ4 224 aa3.13□□□□□ -1.91
AP000462.3-201ENST00000545593 SNX22Q96L94 193 aa3.13□□□□□ -1.91
AP000462.3-201ENST00000545593 WDR24Q96S15 920 aa3.13□□□□□ -1.91
AP000462.3-201ENST00000545593 FSD1Q9BTV5 496 aa3.13□□□□□ -1.91
AP000462.3-201ENST00000545593 LRRC27Q9C0I9 530 aa3.13□□□□□ -1.91
AP000462.3-201ENST00000545593 DNAJC18Q9H819 358 aa3.13□□□□□ -1.91
AP000462.3-201ENST00000545593 MAP6D1Q9H9H5 199 aa3.13□□□□□ -1.91
AP000462.3-201ENST00000545593 ZNF556Q9HAH1 456 aa3.13□□□□□ -1.91
AP000462.3-201ENST00000545593 PLAC1Q9HBJ0 212 aa3.13□□□□□ -1.91
AP000462.3-201ENST00000545593 ZCCHC17Q9NP64 241 aaKnown RBP3.13□□□□□ -1.91
AP000462.3-201ENST00000545593 SPAG4Q9NPE6 437 aa3.13□□□□□ -1.91
AP000462.3-201ENST00000545593 ATP8A2Q9NTI2 1148 aa3.13□□□□□ -1.91
AP000462.3-201ENST00000545593 TMOD4Q9NZQ9 345 aa3.13□□□□□ -1.91
AP000462.3-201ENST00000545593 AGTPBP1Q9UPW5 1226 aa3.13□□□□□ -1.91
AP000462.3-201ENST00000545593 SLC4A4Q9Y6R1 1079 aa3.13□□□□□ -1.91
AP000462.3-201ENST00000545593 ZNFX1Q9P2E3 1918 aaKnown RBP3.13□□□□□ -1.91
AP000462.3-201ENST00000545593 LOC285556D6RIA3 1793 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 CLEC18AA5D8T8 446 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 BTBD18B2RXH4 712 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 C19orf81C9J6K1 198 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 GPAA1O43292 621 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 RFPL1O75677 317 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 IL18RAPO95256 599 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 IGHDP01880 384 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 CYP1A2P05177 515 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 RFPL3SP0C7P2 107 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 HOXD10P28358 340 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 HOXD3P31249 432 aaPredicted RBP3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 SHMT1P34896 483 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 PSMC4P43686 418 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 TDO2P48775 406 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 BACE1P56817 501 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 IRX3P78415 501 aaPredicted RBP3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 Q0VFX4 171 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 TMEM196Q5HYL7 178 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 Q5PR19 223 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 C12orf60Q5U649 245 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 RNF220Q5VTB9 566 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 TATDN1Q6P1N9 297 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 SPSB3Q6PJ21 355 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 C17orf99Q6UX52 265 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 FAM83HQ6ZRV2 1179 aaPredicted RBP3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 RNF44Q7L0R7 432 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 CHD1LQ86WJ1 897 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 SMC5Q8IY18 1101 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 LAS2Q8IYD9 372 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 ANKRD13CQ8N6S4 541 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 CLEC18CQ8NCF0 446 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 RAET1EQ8TD07 263 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 LRTOMTQ8WZ04 291 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 RILPL2Q969X0 211 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 DYNLL2Q96FJ2 89 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 GPR78Q96P69 363 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 STRBPQ96SI9 672 aaKnown RBP3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 SEC62Q99442 399 aaKnown RBP3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 NACAP1Q9BZK3 213 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 RXFP3Q9NSD7 469 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 SWAP70Q9UH65 585 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 G3BP2Q9UN86 482 aaKnown RBP3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 SLC8A2Q9UPR5 921 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 SLC45A1Q9Y2W3 748 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 DDX60LQ5H9U9 1706 aaKnown RBP3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 TRIOBPQ9H2D6 2365 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 SMCHD1A6NHR9 2005 aa3.12□□□□□ -1.91
AP000462.3-201ENST00000545593 MYO9BQ13459 2157 aa3.11□□□□□ -1.91
AP000462.3-201ENST00000545593 BAZ2BQ9UIF8 2168 aaKnown RBP3.11□□□□□ -1.91
AP000462.3-201ENST00000545593 SMTNL1A8MU46 457 aa3.11□□□□□ -1.91
AP000462.3-201ENST00000545593 TNPO2O14787 897 aaKnown RBP3.11□□□□□ -1.91
AP000462.3-201ENST00000545593 RGS14O43566 566 aa3.11□□□□□ -1.91
AP000462.3-201ENST00000545593 CCNT2O60583 730 aaKnown RBP3.11□□□□□ -1.91
AP000462.3-201ENST00000545593 PPP1R3DO95685 299 aa3.11□□□□□ -1.91
AP000462.3-201ENST00000545593 PRSS2P07478 247 aa3.11□□□□□ -1.91
AP000462.3-201ENST00000545593 ALADP13716 330 aa3.11□□□□□ -1.91
AP000462.3-201ENST00000545593 AKR1B1P15121 316 aa3.11□□□□□ -1.91
AP000462.3-201ENST00000545593 TCEA1P23193 301 aaKnown RBP3.11□□□□□ -1.91
AP000462.3-201ENST00000545593 NUCB1Q02818 461 aa3.11□□□□□ -1.91
AP000462.3-201ENST00000545593 ICA1Q05084 483 aa3.11□□□□□ -1.91
AP000462.3-201ENST00000545593 GABPAQ06546 454 aa3.11□□□□□ -1.91
AP000462.3-201ENST00000545593 GPS1Q13098 491 aa3.11□□□□□ -1.91
AP000462.3-201ENST00000545593 GPS2Q13227 327 aa3.11□□□□□ -1.91
AP000462.3-201ENST00000545593 POLD3Q15054 466 aaPredicted RBP3.11□□□□□ -1.91
AP000462.3-201ENST00000545593 FAM76BQ5HYJ3 339 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms