RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-208ENST00000545210 LRRN3Q9H3W5 708 aa11.66□□□□□ -0.54
TMEM258-208ENST00000545210 GEMIN8Q9NWZ8 242 aaKnown RBP11.66□□□□□ -0.54
TMEM258-208ENST00000545210 FOXJ2Q9P0K8 574 aa11.66□□□□□ -0.54
TMEM258-208ENST00000545210 ZNF212Q9UDV6 495 aa11.66□□□□□ -0.54
TMEM258-208ENST00000545210 SEPT3Q9UH03 358 aa11.66□□□□□ -0.54
TMEM258-208ENST00000545210 GPR34Q9UPC5 381 aa11.66□□□□□ -0.54
TMEM258-208ENST00000545210 ZDHHC9Q9Y397 364 aa11.66□□□□□ -0.54
TMEM258-208ENST00000545210 LRRK2Q5S007 2527 aa11.66□□□□□ -0.54
TMEM258-208ENST00000545210 AREL1O15033 823 aa11.65□□□□□ -0.54
TMEM258-208ENST00000545210 SMC2O95347 1197 aa11.65□□□□□ -0.54
TMEM258-208ENST00000545210 UGT2B4P06133 528 aa11.65□□□□□ -0.54
TMEM258-208ENST00000545210 ALPIP09923 528 aa11.65□□□□□ -0.54
TMEM258-208ENST00000545210 CTSEP14091 401 aa11.65□□□□□ -0.54
TMEM258-208ENST00000545210 ETV5P41161 510 aa11.65□□□□□ -0.54
TMEM258-208ENST00000545210 SULT1E1P49888 294 aa11.65□□□□□ -0.54
TMEM258-208ENST00000545210 BLKP51451 505 aa11.65□□□□□ -0.54
TMEM258-208ENST00000545210 MAPK10P53779 464 aa11.65□□□□□ -0.54
TMEM258-208ENST00000545210 DEUP1Q05D60 604 aa11.65□□□□□ -0.54
TMEM258-208ENST00000545210 STIM1Q13586 685 aa11.65□□□□□ -0.54
TMEM258-208ENST00000545210 ARHGAP44Q17R89 818 aa11.65□□□□□ -0.54
TMEM258-208ENST00000545210 KLHL40Q2TBA0 621 aa11.65□□□□□ -0.54
TMEM258-208ENST00000545210 KLHL10Q6JEL2 608 aa11.65□□□□□ -0.54
TMEM258-208ENST00000545210 TTI2Q6NXR4 508 aa11.65□□□□□ -0.54
TMEM258-208ENST00000545210 LVRNQ6Q4G3 990 aa11.65□□□□□ -0.54
TMEM258-208ENST00000545210 NYAP1Q6ZVC0 841 aa11.65□□□□□ -0.54
TMEM258-208ENST00000545210 RD3Q7Z3Z2 195 aa11.65□□□□□ -0.54
TMEM258-208ENST00000545210 TTC7BQ86TV6 843 aa11.65□□□□□ -0.54
TMEM258-208ENST00000545210 PTRH1Q86Y79 214 aaKnown RBP11.65□□□□□ -0.54
TMEM258-208ENST00000545210 CCNJLQ8IV13 435 aa11.65□□□□□ -0.54
TMEM258-208ENST00000545210 TRIM59Q8IWR1 403 aa11.65□□□□□ -0.54
TMEM258-208ENST00000545210 FMR1NBQ8N0W7 255 aaPredicted RBP11.65□□□□□ -0.54
TMEM258-208ENST00000545210 SPATA20Q8TB22 786 aa11.65□□□□□ -0.54
TMEM258-208ENST00000545210 USP7Q93009 1102 aa11.65□□□□□ -0.54
TMEM258-208ENST00000545210 VOPP1Q96AW1 172 aa11.65□□□□□ -0.54
TMEM258-208ENST00000545210 ARHGEF26Q96DR7 871 aa11.65□□□□□ -0.54
TMEM258-208ENST00000545210 DHTKD1Q96HY7 919 aaPredicted RBP11.65□□□□□ -0.54
TMEM258-208ENST00000545210 KLHL32Q96NJ5 620 aa11.65□□□□□ -0.54
TMEM258-208ENST00000545210 TBCBQ99426 244 aa11.65□□□□□ -0.54
TMEM258-208ENST00000545210 EPAS1Q99814 870 aa11.65□□□□□ -0.54
TMEM258-208ENST00000545210 WRAP53Q9BUR4 548 aaKnown RBP11.65□□□□□ -0.54
TMEM258-208ENST00000545210 SYNCQ9H7C4 482 aa11.65□□□□□ -0.54
TMEM258-208ENST00000545210 GDPD2Q9HCC8 539 aa11.65□□□□□ -0.54
TMEM258-208ENST00000545210 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.65□□□□□ -0.54
TMEM258-208ENST00000545210 PCDHGC3Q9UN70 934 aa11.65□□□□□ -0.54
TMEM258-208ENST00000545210 PCDHB11Q9Y5F2 797 aa11.65□□□□□ -0.54
TMEM258-208ENST00000545210 C9orf172C9J069 976 aa11.64□□□□□ -0.55
TMEM258-208ENST00000545210 TOR1BO14657 336 aa11.64□□□□□ -0.55
TMEM258-208ENST00000545210 TM7SF2O76062 418 aa11.64□□□□□ -0.55
TMEM258-208ENST00000545210 GP1BBP13224 206 aa11.64□□□□□ -0.55
TMEM258-208ENST00000545210 ITIH2P19823 946 aa11.64□□□□□ -0.55
TMEM258-208ENST00000545210 ACVRL1P37023 503 aa11.64□□□□□ -0.55
TMEM258-208ENST00000545210 SNX16P57768 344 aa11.64□□□□□ -0.55
TMEM258-208ENST00000545210 APBA1Q02410 837 aa11.64□□□□□ -0.55
TMEM258-208ENST00000545210 ZFP36L1Q07352 338 aaKnown RBP11.64□□□□□ -0.55
TMEM258-208ENST00000545210 IRF4Q15306 451 aa11.64□□□□□ -0.55
TMEM258-208ENST00000545210 ALG11Q2TAA5 492 aa11.64□□□□□ -0.55
TMEM258-208ENST00000545210 PTPN20Q4JDL3 420 aa11.64□□□□□ -0.55
TMEM258-208ENST00000545210 LEKR1Q6ZMV7 388 aa11.64□□□□□ -0.55
TMEM258-208ENST00000545210 ENOSF1Q7L5Y1 443 aa11.64□□□□□ -0.55
TMEM258-208ENST00000545210 GKN2Q86XP6 184 aa11.64□□□□□ -0.55
TMEM258-208ENST00000545210 DTX1Q86Y01 620 aa11.64□□□□□ -0.55
TMEM258-208ENST00000545210 PLPP6Q8IY26 295 aa11.64□□□□□ -0.55
TMEM258-208ENST00000545210 TP53I13Q8NBR0 393 aaPredicted RBP11.64□□□□□ -0.55
TMEM258-208ENST00000545210 ZNF397Q8NF99 534 aaPredicted RBP11.64□□□□□ -0.55
TMEM258-208ENST00000545210 CXorf40AQ8TE69 158 aa11.64□□□□□ -0.55
TMEM258-208ENST00000545210 JPH3Q8WXH2 748 aaPredicted RBP11.64□□□□□ -0.55
TMEM258-208ENST00000545210 NT5C3BQ969T7 300 aa11.64□□□□□ -0.55
TMEM258-208ENST00000545210 ISG20Q96AZ6 181 aaKnown RBP11.64□□□□□ -0.55
TMEM258-208ENST00000545210 PGAP3Q96FM1 320 aaPredicted RBP11.64□□□□□ -0.55
TMEM258-208ENST00000545210 CRACR2AQ9BSW2 395 aa11.64□□□□□ -0.55
TMEM258-208ENST00000545210 C1QTNF7Q9BXJ2 289 aa11.64□□□□□ -0.55
TMEM258-208ENST00000545210 EDEM3Q9BZQ6 932 aa11.64□□□□□ -0.55
TMEM258-208ENST00000545210 ZYG11BQ9C0D3 744 aa11.64□□□□□ -0.55
TMEM258-208ENST00000545210 EPN3Q9H201 632 aa11.64□□□□□ -0.55
TMEM258-208ENST00000545210 PLCB1Q9NQ66 1216 aa11.64□□□□□ -0.55
TMEM258-208ENST00000545210 RRN3Q9NYV6 651 aa11.64□□□□□ -0.55
TMEM258-208ENST00000545210 STAP1Q9ULZ2 295 aa11.64□□□□□ -0.55
TMEM258-208ENST00000545210 PAXBP1Q9Y5B6 917 aa11.64□□□□□ -0.55
TMEM258-208ENST00000545210 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.64□□□□□ -0.55
TMEM258-208ENST00000545210 A0A1W2PQC6 194 aa11.63□□□□□ -0.55
TMEM258-208ENST00000545210 FAM170AA1A519 330 aa11.63□□□□□ -0.55
TMEM258-208ENST00000545210 RASGRP1O95267 797 aa11.63□□□□□ -0.55
TMEM258-208ENST00000545210 F9P00740 461 aa11.63□□□□□ -0.55
TMEM258-208ENST00000545210 MORC3Q14149 939 aa11.63□□□□□ -0.55
TMEM258-208ENST00000545210 POLD3Q15054 466 aaPredicted RBP11.63□□□□□ -0.55
TMEM258-208ENST00000545210 SKIDA1Q1XH10 827 aa11.63□□□□□ -0.55
TMEM258-208ENST00000545210 MYLK3Q32MK0 819 aa11.63□□□□□ -0.55
TMEM258-208ENST00000545210 SLC25A52Q3SY17 297 aa11.63□□□□□ -0.55
TMEM258-208ENST00000545210 ATXN7L2Q5T6C5 722 aaPredicted RBP11.63□□□□□ -0.55
TMEM258-208ENST00000545210 PHF19Q5T6S3 580 aa11.63□□□□□ -0.55
TMEM258-208ENST00000545210 ACBD5Q5T8D3 534 aaPredicted RBP11.63□□□□□ -0.55
TMEM258-208ENST00000545210 TRIM65Q6PJ69 517 aa11.63□□□□□ -0.55
TMEM258-208ENST00000545210 ENPP7Q6UWV6 458 aa11.63□□□□□ -0.55
TMEM258-208ENST00000545210 GDPD4Q6W3E5 623 aa11.63□□□□□ -0.55
TMEM258-208ENST00000545210 TMPRSS9Q7Z410 1059 aa11.63□□□□□ -0.55
TMEM258-208ENST00000545210 OR6C4Q8NGE1 309 aa11.63□□□□□ -0.55
TMEM258-208ENST00000545210 OR2AP1Q8NGE2 309 aa11.63□□□□□ -0.55
TMEM258-208ENST00000545210 ZNF564Q8TBZ8 553 aaPredicted RBP11.63□□□□□ -0.55
TMEM258-208ENST00000545210 TMEM159Q96B96 161 aa11.63□□□□□ -0.55
TMEM258-208ENST00000545210 CMKLR1Q99788 373 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms